RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 C6orf99Q4VX62 202 aa10.54□□□□□ -0.72
SNX1-203ENST00000558040 LYRM7Q5U5X0 104 aa10.54□□□□□ -0.72
SNX1-203ENST00000558040 REG3GQ6UW15 175 aa10.54□□□□□ -0.72
SNX1-203ENST00000558040 NAA38Q9BRA0 125 aaKnown RBP10.53□□□□□ -0.72
SNX1-203ENST00000558040 DNAH5Q8TE73 4624 aa10.52□□□□□ -0.72
SNX1-203ENST00000558040 SCGB1C2P0DMR2 95 aa10.52□□□□□ -0.73
SNX1-203ENST00000558040 TRBV7-6A0A0J9YX20 115 aa10.51□□□□□ -0.73
SNX1-203ENST00000558040 SPRR1AP35321 89 aa10.51□□□□□ -0.73
SNX1-203ENST00000558040 HAMPP81172 84 aa10.51□□□□□ -0.73
SNX1-203ENST00000558040 ETDCA0A1B0GVM5 59 aa10.5□□□□□ -0.73
SNX1-203ENST00000558040 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
SNX1-203ENST00000558040 H0YGX0 51 aa10.5□□□□□ -0.73
SNX1-203ENST00000558040 FABP2P12104 132 aa10.49□□□□□ -0.73
SNX1-203ENST00000558040 COX7BP24311 80 aa10.48□□□□□ -0.73
SNX1-203ENST00000558040 KRTAP11-1Q8IUC1 163 aa10.48□□□□□ -0.73
SNX1-203ENST00000558040 XGP55808 180 aa10.47□□□□□ -0.73
SNX1-203ENST00000558040 ELOF1P60002 83 aaKnown RBP10.47□□□□□ -0.73
SNX1-203ENST00000558040 KRTAP4-16G5E9R7 235 aaPredicted RBP10.46□□□□□ -0.73
SNX1-203ENST00000558040 BCE1O60756 84 aa10.46□□□□□ -0.73
SNX1-203ENST00000558040 PSORS1C2Q9UIG4 136 aa10.46□□□□□ -0.73
SNX1-203ENST00000558040 FAM19A1Q7Z5A9 133 aa10.45□□□□□ -0.74
SNX1-203ENST00000558040 TRBV20-1A0A075B6N2 111 aa10.44□□□□□ -0.74
SNX1-203ENST00000558040 B5MCH6 92 aa10.44□□□□□ -0.74
SNX1-203ENST00000558040 SNCGO76070 127 aa10.44□□□□□ -0.74
SNX1-203ENST00000558040 Q6ZRX8 168 aa10.44□□□□□ -0.74
SNX1-203ENST00000558040 DNAH8Q96JB1 4490 aa10.43□□□□□ -0.74
SNX1-203ENST00000558040 SLC25A20O43772 301 aa10.43□□□□□ -0.74
SNX1-203ENST00000558040 CDK2AP2O75956 126 aa10.43□□□□□ -0.74
SNX1-203ENST00000558040 UBE2AP49459 152 aa10.43□□□□□ -0.74
SNX1-203ENST00000558040 C1orf137Q5JT78 98 aa10.43□□□□□ -0.74
SNX1-203ENST00000558040 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
SNX1-203ENST00000558040 CLEC2BQ92478 149 aa10.43□□□□□ -0.74
SNX1-203ENST00000558040 PKHD1P08F94 4074 aa10.43□□□□□ -0.74
SNX1-203ENST00000558040 SPCS1Q9Y6A9 102 aa10.42□□□□□ -0.74
SNX1-203ENST00000558040 A0A1B0GX51 115 aa10.41□□□□□ -0.74
SNX1-203ENST00000558040 H0Y9J4 135 aa10.41□□□□□ -0.74
SNX1-203ENST00000558040 INAFM2P0DMQ5 153 aa10.41□□□□□ -0.74
SNX1-203ENST00000558040 ATXN8Q156A1 80 aa10.41□□□□□ -0.74
SNX1-203ENST00000558040 LINC00575Q6W349 94 aa10.41□□□□□ -0.74
SNX1-203ENST00000558040 DHRS4-AS1Q9P1J3 65 aa10.41□□□□□ -0.74
SNX1-203ENST00000558040 LST1O00453 97 aa10.4□□□□□ -0.74
SNX1-203ENST00000558040 TCL1BO95988 128 aa10.4□□□□□ -0.74
SNX1-203ENST00000558040 PRLHP81277 87 aa10.4□□□□□ -0.74
SNX1-203ENST00000558040 FAM218AQ96MZ4 157 aa10.39□□□□□ -0.75
SNX1-203ENST00000558040 hADV29S1A0JD25 119 aa10.38□□□□□ -0.75
SNX1-203ENST00000558040 GTF2H5Q6ZYL4 71 aa10.38□□□□□ -0.75
SNX1-203ENST00000558040 LRP1BQ9NZR2 4599 aa10.38□□□□□ -0.75
SNX1-203ENST00000558040 DYNC1H1Q14204 4646 aaKnown RBP10.37□□□□□ -0.75
SNX1-203ENST00000558040 K7EP34 96 aa10.37□□□□□ -0.75
SNX1-203ENST00000558040 DNAL4O96015 105 aa10.37□□□□□ -0.75
SNX1-203ENST00000558040 TRACP01848 142 aa10.37□□□□□ -0.75
SNX1-203ENST00000558040 A0A1B0GV90 55 aa10.36□□□□□ -0.75
SNX1-203ENST00000558040 IGLV7-43P04211 117 aa10.36□□□□□ -0.75
SNX1-203ENST00000558040 RPL37AP61513 92 aaKnown RBP10.36□□□□□ -0.75
SNX1-203ENST00000558040 KRTAP13-1Q8IUC0 172 aa10.36□□□□□ -0.75
SNX1-203ENST00000558040 Q9BRP9 147 aa10.36□□□□□ -0.75
SNX1-203ENST00000558040 SMR3BP02814 79 aaPredicted RBP10.35□□□□□ -0.75
SNX1-203ENST00000558040 HIGD2AQ9BW72 106 aa10.35□□□□□ -0.75
SNX1-203ENST00000558040 ZNF861PO60384 105 aa10.34□□□□□ -0.75
SNX1-203ENST00000558040 SMCR5Q8TEV8 140 aa10.34□□□□□ -0.75
SNX1-203ENST00000558040 H3BMG7 143 aa10.32□□□□□ -0.76
SNX1-203ENST00000558040 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.32□□□□□ -0.76
SNX1-203ENST00000558040 FAM229AH3BQW9 127 aa10.3□□□□□ -0.76
SNX1-203ENST00000558040 GHRHP01286 108 aa10.3□□□□□ -0.76
SNX1-203ENST00000558040 OCIAD2Q56VL3 154 aa10.3□□□□□ -0.76
SNX1-203ENST00000558040 Q6ZQY7 126 aa10.3□□□□□ -0.76
SNX1-203ENST00000558040 ORMDL1Q9P0S3 153 aa10.29□□□□□ -0.76
SNX1-203ENST00000558040 C9JAW5 83 aa10.28□□□□□ -0.76
SNX1-203ENST00000558040 H3BQ85 93 aa10.28□□□□□ -0.76
SNX1-203ENST00000558040 ERC2-IT1O76042 136 aa10.28□□□□□ -0.76
SNX1-203ENST00000558040 PLA2G1BP04054 148 aaKnown RBP10.28□□□□□ -0.76
SNX1-203ENST00000558040 ZNF706Q9Y5V0 76 aaPredicted RBP10.27□□□□□ -0.77
SNX1-203ENST00000558040 UBE2V1Q13404 147 aa10.26□□□□□ -0.77
SNX1-203ENST00000558040 APOBP04114 4563 aaKnown RBP10.25□□□□□ -0.77
SNX1-203ENST00000558040 ST20-AS1Q8NBB2 130 aa10.24□□□□□ -0.77
SNX1-203ENST00000558040 PPDPFLQ8WWR9 84 aa10.24□□□□□ -0.77
SNX1-203ENST00000558040 IGLV5-48A0A075B6I7 105 aa10.23□□□□□ -0.77
SNX1-203ENST00000558040 H3BT86 120 aa10.23□□□□□ -0.77
SNX1-203ENST00000558040 TMEM256-PLSCR3K7ERE1 68 aa10.23□□□□□ -0.77
SNX1-203ENST00000558040 BAALC-AS2P0C853 105 aa10.23□□□□□ -0.77
SNX1-203ENST00000558040 DEFB105AQ8NG35 78 aa10.23□□□□□ -0.77
SNX1-203ENST00000558040 Q5VSD8 79 aa10.22□□□□□ -0.77
SNX1-203ENST00000558040 SPINK6Q6UWN8 80 aa10.22□□□□□ -0.77
SNX1-203ENST00000558040 TEX49A0A1B0GTD5 131 aa10.21□□□□□ -0.77
SNX1-203ENST00000558040 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
SNX1-203ENST00000558040 MTURNQ8N3F0 131 aa10.21□□□□□ -0.77
SNX1-203ENST00000558040 F8W1H4 67 aa10.2□□□□□ -0.78
SNX1-203ENST00000558040 GAGE2AQ6NT46 116 aa10.2□□□□□ -0.78
SNX1-203ENST00000558040 SPRR4Q96PI1 79 aa10.2□□□□□ -0.78
SNX1-203ENST00000558040 EPPK1P58107 5090 aaKnown RBP10.2□□□□□ -0.78
SNX1-203ENST00000558040 LINC01547P58512 204 aaPredicted RBP10.19□□□□□ -0.78
SNX1-203ENST00000558040 Q8N1X5 172 aa10.19□□□□□ -0.78
SNX1-203ENST00000558040 ANKRD29Q8N6D5 301 aa10.19□□□□□ -0.78
SNX1-203ENST00000558040 PRO0461Q9UI25 63 aa10.19□□□□□ -0.78
SNX1-203ENST00000558040 Q8N377 158 aa10.18□□□□□ -0.78
SNX1-203ENST00000558040 SPRR1BP22528 89 aa10.17□□□□□ -0.78
SNX1-203ENST00000558040 LINC00483Q53H64 154 aa10.16□□□□□ -0.78
SNX1-203ENST00000558040 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
SNX1-203ENST00000558040 SMCPP49901 116 aaPredicted RBP10.14□□□□□ -0.79
SNX1-203ENST00000558040 LAMTOR3Q9UHA4 124 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms