RNA–Protein interactions for RNA: ENST00000557680.1

PNN-206, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3

Gene PNN, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-206ENST00000557680 PAPPA2Q9BXP8 1791 aa0.54□□□□□ -2.32
PNN-206ENST00000557680 TJP1Q07157 1748 aa0.53□□□□□ -2.32
PNN-206ENST00000557680 PKIAP61925 76 aa0.53□□□□□ -2.32
PNN-206ENST00000557680 FDCSPQ8NFU4 85 aa0.53□□□□□ -2.32
PNN-206ENST00000557680 DPY30Q9C005 99 aa0.53□□□□□ -2.32
PNN-206ENST00000557680 PLCE1Q9P212 2302 aa0.52□□□□□ -2.33
PNN-206ENST00000557680 LELP1Q5T871 98 aa0.52□□□□□ -2.33
PNN-206ENST00000557680 TMEM263Q8WUH6 116 aaKnown RBP0.52□□□□□ -2.33
PNN-206ENST00000557680 AP4S1Q9Y587 144 aa0.52□□□□□ -2.33
PNN-206ENST00000557680 USH2AO75445 5202 aa0.52□□□□□ -2.33
PNN-206ENST00000557680 RAPGEF2Q9Y4G8 1499 aa0.52□□□□□ -2.33
PNN-206ENST00000557680 MYCBP2O75592 4640 aa0.52□□□□□ -2.33
PNN-206ENST00000557680 A0A087WVE0 104 aa0.51□□□□□ -2.33
PNN-206ENST00000557680 A0A1B0GWA3 101 aa0.51□□□□□ -2.33
PNN-206ENST00000557680 SAA2P0DJI9 122 aaPredicted RBP0.51□□□□□ -2.33
PNN-206ENST00000557680 PRKDCP78527 4128 aaKnown RBP0.51□□□□□ -2.33
PNN-206ENST00000557680 MAP3K1Q13233 1512 aa0.51□□□□□ -2.33
PNN-206ENST00000557680 C1orf167Q5SNV9 1468 aa0.51□□□□□ -2.33
PNN-206ENST00000557680 COL5A1-AS1Q5SY13 56 aa0.51□□□□□ -2.33
PNN-206ENST00000557680 DNMBPQ6XZF7 1577 aa0.51□□□□□ -2.33
PNN-206ENST00000557680 LINC01600Q96MT4 127 aa0.51□□□□□ -2.33
PNN-206ENST00000557680 MAGI1Q96QZ7 1491 aaPredicted RBP0.51□□□□□ -2.33
PNN-206ENST00000557680 NLRP1Q9C000 1473 aa0.51□□□□□ -2.33
PNN-206ENST00000557680 WNK2Q9Y3S1 2297 aa0.51□□□□□ -2.33
PNN-206ENST00000557680 ANK2Q01484 3957 aa0.51□□□□□ -2.33
PNN-206ENST00000557680 ABCA8O94911 1581 aa0.5□□□□□ -2.33
PNN-206ENST00000557680 ASXL1Q8IXJ9 1541 aa0.5□□□□□ -2.33
PNN-206ENST00000557680 FANCAO15360 1455 aa0.5□□□□□ -2.33
PNN-206ENST00000557680 A0A0D9SFI3 127 aa0.5□□□□□ -2.33
PNN-206ENST00000557680 TP53AIP1Q9HCN2 124 aa0.5□□□□□ -2.33
PNN-206ENST00000557680 PDCD11Q14690 1871 aaKnown RBP0.5□□□□□ -2.33
PNN-206ENST00000557680 NEXMIFQ5QGS0 1516 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 LRP1BQ9NZR2 4599 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 PLEKHH2Q8IVE3 1493 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 ATOX1O00244 68 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 SERP2Q8N6R1 65 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 VAMP8Q9BV40 100 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 MUC12Q9UKN1 5478 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 C3P01024 1663 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 ZNF831Q5JPB2 1677 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 LAMA5O15230 3695 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 DMDP11532 3685 aa0.49□□□□□ -2.33
PNN-206ENST00000557680 URB1O60287 2271 aaKnown RBP0.48□□□□□ -2.33
PNN-206ENST00000557680 PKHD1P08F94 4074 aa0.48□□□□□ -2.33
PNN-206ENST00000557680 MON2Q7Z3U7 1717 aa0.48□□□□□ -2.33
PNN-206ENST00000557680 TRBV25-1A0A075B6N4 114 aa0.48□□□□□ -2.33
PNN-206ENST00000557680 NDUFC1O43677 76 aa0.48□□□□□ -2.33
PNN-206ENST00000557680 LINC00032P0C843 101 aa0.48□□□□□ -2.33
PNN-206ENST00000557680 TRGV9Q99603 122 aa0.48□□□□□ -2.33
PNN-206ENST00000557680 KIF14Q15058 1648 aa0.48□□□□□ -2.33
PNN-206ENST00000557680 TSC2P49815 1807 aa0.48□□□□□ -2.33
PNN-206ENST00000557680 AKAP6Q13023 2319 aa0.47□□□□□ -2.33
PNN-206ENST00000557680 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
PNN-206ENST00000557680 SYS1-DBNDD2H3BUS1 97 aa0.47□□□□□ -2.33
PNN-206ENST00000557680 SPCS1Q9Y6A9 102 aa0.47□□□□□ -2.33
PNN-206ENST00000557680 MAST1Q9Y2H9 1570 aa0.47□□□□□ -2.33
PNN-206ENST00000557680 PKD1L3Q7Z443 1732 aa0.47□□□□□ -2.33
PNN-206ENST00000557680 DNAH1Q9P2D7 4330 aa0.46□□□□□ -2.34
PNN-206ENST00000557680 DNAH7Q8WXX0 4024 aa0.46□□□□□ -2.34
PNN-206ENST00000557680 SAMD9Q5K651 1589 aa0.46□□□□□ -2.34
PNN-206ENST00000557680 TRBV7-7A0A0K0K1E9 115 aa0.46□□□□□ -2.34
PNN-206ENST00000557680 LINC00959A0A1B0GUT2 108 aa0.46□□□□□ -2.34
PNN-206ENST00000557680 C7orf77A4D0Y5 90 aa0.46□□□□□ -2.34
PNN-206ENST00000557680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.46□□□□□ -2.34
PNN-206ENST00000557680 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
PNN-206ENST00000557680 AKAP9Q99996 3911 aa0.46□□□□□ -2.34
PNN-206ENST00000557680 MAGI3Q5TCQ9 1506 aa0.45□□□□□ -2.34
PNN-206ENST00000557680 XRN1Q8IZH2 1706 aaKnown RBP0.45□□□□□ -2.34
PNN-206ENST00000557680 FAUP35544 74 aaKnown RBP0.45□□□□□ -2.34
PNN-206ENST00000557680 PSMG4Q5JS54 123 aa0.45□□□□□ -2.34
PNN-206ENST00000557680 Q8IZM0 81 aa0.45□□□□□ -2.34
PNN-206ENST00000557680 RGPD3A6NKT7 1758 aaPredicted RBP0.45□□□□□ -2.34
PNN-206ENST00000557680 RGPD4Q7Z3J3 1758 aa0.45□□□□□ -2.34
PNN-206ENST00000557680 KNDC1Q76NI1 1749 aa0.44□□□□□ -2.34
PNN-206ENST00000557680 TRBV6-1A0A0K0K1D8 114 aa0.44□□□□□ -2.34
PNN-206ENST00000557680 PMCHL1Q16048 86 aa0.44□□□□□ -2.34
PNN-206ENST00000557680 Q5BKY6 102 aa0.44□□□□□ -2.34
PNN-206ENST00000557680 LINC00846Q9NV44 126 aa0.44□□□□□ -2.34
PNN-206ENST00000557680 DYNC2H1Q8NCM8 4307 aaKnown RBP0.44□□□□□ -2.34
PNN-206ENST00000557680 POLR1AO95602 1720 aaPredicted RBP0.44□□□□□ -2.34
PNN-206ENST00000557680 ABCC3O15438 1527 aa0.43□□□□□ -2.34
PNN-206ENST00000557680 PLCH1Q4KWH8 1693 aa0.43□□□□□ -2.34
PNN-206ENST00000557680 HECTD4Q9Y4D8 3996 aa0.43□□□□□ -2.34
PNN-206ENST00000557680 DYNC1H1Q14204 4646 aaKnown RBP0.43□□□□□ -2.34
PNN-206ENST00000557680 ATP10BO94823 1461 aa0.43□□□□□ -2.34
PNN-206ENST00000557680 ABCA6Q8N139 1617 aa0.43□□□□□ -2.34
PNN-206ENST00000557680 UQCRHP07919 91 aa0.43□□□□□ -2.34
PNN-206ENST00000557680 TROQ12816 1431 aaPredicted RBP0.43□□□□□ -2.34
PNN-206ENST00000557680 TIAM1Q13009 1591 aa0.43□□□□□ -2.34
PNN-206ENST00000557680 SUPT6HQ7KZ85 1726 aaKnown RBP0.43□□□□□ -2.34
PNN-206ENST00000557680 CMYA5Q8N3K9 4069 aa0.43□□□□□ -2.34
PNN-206ENST00000557680 UGGT2Q9NYU1 1516 aa0.43□□□□□ -2.34
PNN-206ENST00000557680 HRNRQ86YZ3 2850 aaPredicted RBP0.43□□□□□ -2.34
PNN-206ENST00000557680 LRP1Q07954 4544 aaKnown RBP0.43□□□□□ -2.34
PNN-206ENST00000557680 SACSQ9NZJ4 4579 aa0.42□□□□□ -2.34
PNN-206ENST00000557680 CCDC88BA6NC98 1476 aa0.42□□□□□ -2.34
PNN-206ENST00000557680 POLA1P09884 1462 aaPredicted RBP0.42□□□□□ -2.34
PNN-206ENST00000557680 LCE6AA0A183 80 aa0.42□□□□□ -2.34
PNN-206ENST00000557680 LRP2P98164 4655 aa0.42□□□□□ -2.34
PNN-206ENST00000557680 PRO1933Q9H354 126 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms