RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 TRAV23DV6A0A075B6W5 121 aa6.59□□□□□ -1.35
SNX6-209ENST00000557265 APOC3P02656 99 aa6.59□□□□□ -1.35
SNX6-209ENST00000557265 ZNF73O43830 326 aaPredicted RBP6.58□□□□□ -1.36
SNX6-209ENST00000557265 TSPEAR-AS2P59090 65 aa6.58□□□□□ -1.36
SNX6-209ENST00000557265 MIEN1Q9BRT3 115 aa6.58□□□□□ -1.36
SNX6-209ENST00000557265 C5orf52A6NGY3 159 aa6.57□□□□□ -1.36
SNX6-209ENST00000557265 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
SNX6-209ENST00000557265 NDUFC2O95298 119 aa6.56□□□□□ -1.36
SNX6-209ENST00000557265 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.55□□□□□ -1.36
SNX6-209ENST00000557265 SPRR1BP22528 89 aa6.55□□□□□ -1.36
SNX6-209ENST00000557265 SLC25A34Q6PIV7 304 aa6.55□□□□□ -1.36
SNX6-209ENST00000557265 USH2AO75445 5202 aa6.55□□□□□ -1.36
SNX6-209ENST00000557265 LEPROTO15243 131 aa6.54□□□□□ -1.36
SNX6-209ENST00000557265 SNAPINO95295 136 aa6.54□□□□□ -1.36
SNX6-209ENST00000557265 HINT1P49773 126 aaPredicted RBP6.54□□□□□ -1.36
SNX6-209ENST00000557265 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
SNX6-209ENST00000557265 SVBPQ8N300 66 aa6.54□□□□□ -1.36
SNX6-209ENST00000557265 CHCHD1Q96BP2 118 aaKnown RBP6.54□□□□□ -1.36
SNX6-209ENST00000557265 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
SNX6-209ENST00000557265 H0Y8G0 127 aa6.53□□□□□ -1.36
SNX6-209ENST00000557265 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
SNX6-209ENST00000557265 LAMTOR3Q9UHA4 124 aa6.53□□□□□ -1.36
SNX6-209ENST00000557265 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
SNX6-209ENST00000557265 H7C2G1 150 aa6.52□□□□□ -1.37
SNX6-209ENST00000557265 J3QQQ9 107 aa6.52□□□□□ -1.37
SNX6-209ENST00000557265 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
SNX6-209ENST00000557265 NPC2P61916 151 aa6.52□□□□□ -1.37
SNX6-209ENST00000557265 SOSTDC1Q6X4U4 206 aa6.52□□□□□ -1.37
SNX6-209ENST00000557265 CD164Q04900 197 aa6.51□□□□□ -1.37
SNX6-209ENST00000557265 C1orf195Q5TG92 126 aa6.5□□□□□ -1.37
SNX6-209ENST00000557265 YPEL4Q96NS1 127 aa6.5□□□□□ -1.37
SNX6-209ENST00000557265 DHRS4-AS1Q9P1J3 65 aa6.5□□□□□ -1.37
SNX6-209ENST00000557265 LGALS3P17931 250 aaKnown RBP6.49□□□□□ -1.37
SNX6-209ENST00000557265 NMUP48645 174 aa6.49□□□□□ -1.37
SNX6-209ENST00000557265 Q1RN00 199 aa6.49□□□□□ -1.37
SNX6-209ENST00000557265 ADAMTSL4-AS1Q5T5F5 129 aa6.49□□□□□ -1.37
SNX6-209ENST00000557265 SLC7A5P1Q8MH63 180 aa6.49□□□□□ -1.37
SNX6-209ENST00000557265 PRO1933Q9H354 126 aa6.49□□□□□ -1.37
SNX6-209ENST00000557265 CBY1Q9Y3M2 126 aa6.49□□□□□ -1.37
SNX6-209ENST00000557265 Q5XG85 94 aa6.48□□□□□ -1.37
SNX6-209ENST00000557265 DEFB105AQ8NG35 78 aa6.48□□□□□ -1.37
SNX6-209ENST00000557265 OR13C6PQ8NH95 151 aa6.48□□□□□ -1.37
SNX6-209ENST00000557265 HSBP1O75506 76 aa6.47□□□□□ -1.37
SNX6-209ENST00000557265 PLNP26678 52 aa6.47□□□□□ -1.37
SNX6-209ENST00000557265 HERVK_113P61574 105 aa6.47□□□□□ -1.37
SNX6-209ENST00000557265 TAL2Q16559 108 aa6.47□□□□□ -1.37
SNX6-209ENST00000557265 A0A0J9YXY3 114 aa6.46□□□□□ -1.38
SNX6-209ENST00000557265 A0A0G2JQZ4 141 aa6.45□□□□□ -1.38
SNX6-209ENST00000557265 DPM2O94777 84 aa6.45□□□□□ -1.38
SNX6-209ENST00000557265 AKR1D1P51857 326 aa6.45□□□□□ -1.38
SNX6-209ENST00000557265 Q6Q795 121 aa6.45□□□□□ -1.38
SNX6-209ENST00000557265 PMCHL2Q9BQD1 86 aa6.45□□□□□ -1.38
SNX6-209ENST00000557265 TEX49A0A1B0GTD5 131 aa6.44□□□□□ -1.38
SNX6-209ENST00000557265 LEPROTL1O95214 131 aa6.44□□□□□ -1.38
SNX6-209ENST00000557265 COX7BP24311 80 aa6.44□□□□□ -1.38
SNX6-209ENST00000557265 SMIM29Q86T20 159 aa6.44□□□□□ -1.38
SNX6-209ENST00000557265 SPANXCQ9NY87 97 aa6.44□□□□□ -1.38
SNX6-209ENST00000557265 ELOF1P60002 83 aaKnown RBP6.43□□□□□ -1.38
SNX6-209ENST00000557265 IGKCP01834 107 aa6.42□□□□□ -1.38
SNX6-209ENST00000557265 C6orf99Q4VX62 202 aa6.42□□□□□ -1.38
SNX6-209ENST00000557265 LINC00308Q8TCZ7 52 aa6.42□□□□□ -1.38
SNX6-209ENST00000557265 SPANXDQ9BXN6 97 aa6.41□□□□□ -1.38
SNX6-209ENST00000557265 FCGBPQ9Y6R7 5405 aaPredicted RBP6.41□□□□□ -1.38
SNX6-209ENST00000557265 TRGC2P03986 189 aa6.4□□□□□ -1.38
SNX6-209ENST00000557265 CFC1P0CG37 223 aa6.4□□□□□ -1.38
SNX6-209ENST00000557265 FABP4P15090 132 aa6.4□□□□□ -1.38
SNX6-209ENST00000557265 LITAFQ99732 161 aa6.4□□□□□ -1.38
SNX6-209ENST00000557265 HSPB8Q9UJY1 196 aa6.39□□□□□ -1.39
SNX6-209ENST00000557265 E9PLD3 99 aa6.38□□□□□ -1.39
SNX6-209ENST00000557265 SERF1AO75920 110 aa6.38□□□□□ -1.39
SNX6-209ENST00000557265 TCL1BO95988 128 aa6.38□□□□□ -1.39
SNX6-209ENST00000557265 LINC00310P59036 64 aa6.38□□□□□ -1.39
SNX6-209ENST00000557265 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
SNX6-209ENST00000557265 COLCA2A8K830 154 aa6.37□□□□□ -1.39
SNX6-209ENST00000557265 ATP11AUNQ6ZP68 121 aa6.37□□□□□ -1.39
SNX6-209ENST00000557265 IGLV5-48A0A075B6I7 105 aa6.36□□□□□ -1.39
SNX6-209ENST00000557265 LINC00518Q8N0U6 118 aa6.36□□□□□ -1.39
SNX6-209ENST00000557265 TRBV7-6A0A0J9YX20 115 aa6.35□□□□□ -1.39
SNX6-209ENST00000557265 TIMM17BO60830 172 aa6.35□□□□□ -1.39
SNX6-209ENST00000557265 PCP2Q8IVA1 136 aa6.34□□□□□ -1.39
SNX6-209ENST00000557265 A0A1B0GWB2 263 aa6.33□□□□□ -1.4
SNX6-209ENST00000557265 OBSCN-AS1Q96MR7 158 aa6.33□□□□□ -1.4
SNX6-209ENST00000557265 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
SNX6-209ENST00000557265 Q75L30 129 aa6.32□□□□□ -1.4
SNX6-209ENST00000557265 C20orf202A1L168 122 aa6.3□□□□□ -1.4
SNX6-209ENST00000557265 ZNF815PA8K554 130 aa6.3□□□□□ -1.4
SNX6-209ENST00000557265 TTTY13Q9BZ97 58 aa6.3□□□□□ -1.4
SNX6-209ENST00000557265 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
SNX6-209ENST00000557265 A6NDN8 102 aa6.29□□□□□ -1.4
SNX6-209ENST00000557265 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
SNX6-209ENST00000557265 F8WEM9 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 HIST1H2BKO60814 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 HIST1H2BJP06899 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 HIST1H2BOP23527 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 HIST1H2BBP33778 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 HIST1H2BDP58876 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 HIST1H2BCP62807 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 HIST2H2BEQ16778 126 aa6.28□□□□□ -1.4
SNX6-209ENST00000557265 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.28□□□□□ -1.4
SNX6-209ENST00000557265 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms