RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 LINC00208Q96KT6 92 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 PRR15LQ9BU68 103 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 KCNQ1DNQ9H478 68 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 CDC42SE1Q9NRR8 79 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 KLK12Q9UKR0 248 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 MGAQ8IWI9 3026 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 COL6A6A6NMZ7 2263 aa2.4□□□□□ -2.02
FOXN3-213ENST00000556916 A6NED7 52 aa2.4□□□□□ -2.03
FOXN3-213ENST00000556916 C3orf84H3BNL1 204 aa2.4□□□□□ -2.03
FOXN3-213ENST00000556916 ANGP03950 147 aaKnown RBP2.4□□□□□ -2.03
FOXN3-213ENST00000556916 DEFB136Q30KP8 78 aa2.4□□□□□ -2.03
FOXN3-213ENST00000556916 KPRPQ5T749 579 aaPredicted RBP2.4□□□□□ -2.03
FOXN3-213ENST00000556916 CLPSL2Q6UWE3 100 aa2.4□□□□□ -2.03
FOXN3-213ENST00000556916 ZNF702PQ9H963 129 aa2.4□□□□□ -2.03
FOXN3-213ENST00000556916 DSPP15924 2871 aaKnown RBP2.4□□□□□ -2.03
FOXN3-213ENST00000556916 EP300Q09472 2414 aaPredicted RBP2.4□□□□□ -2.03
FOXN3-213ENST00000556916 PIEZO2Q9H5I5 2752 aa2.39□□□□□ -2.03
FOXN3-213ENST00000556916 IGLV10-54A0A075B6I4 117 aa2.39□□□□□ -2.03
FOXN3-213ENST00000556916 GIG44P09565 113 aaPredicted RBP2.39□□□□□ -2.03
FOXN3-213ENST00000556916 PRR4Q16378 134 aa2.39□□□□□ -2.03
FOXN3-213ENST00000556916 WFDC10AQ9H1F0 79 aa2.39□□□□□ -2.03
FOXN3-213ENST00000556916 PRO3102Q9H379 93 aa2.39□□□□□ -2.03
FOXN3-213ENST00000556916 PRO0255Q9UI72 69 aa2.39□□□□□ -2.03
FOXN3-213ENST00000556916 VPS13AQ96RL7 3174 aa2.38□□□□□ -2.03
FOXN3-213ENST00000556916 C8orf87E5RJ46 101 aa2.38□□□□□ -2.03
FOXN3-213ENST00000556916 C1orf137Q5JT78 98 aa2.38□□□□□ -2.03
FOXN3-213ENST00000556916 ST20-AS1Q8NBB2 130 aa2.38□□□□□ -2.03
FOXN3-213ENST00000556916 SPRR4Q96PI1 79 aa2.38□□□□□ -2.03
FOXN3-213ENST00000556916 CCL19Q99731 98 aa2.38□□□□□ -2.03
FOXN3-213ENST00000556916 LAMA3Q16787 3333 aa2.38□□□□□ -2.03
FOXN3-213ENST00000556916 TPRP12270 2363 aaKnown RBP2.37□□□□□ -2.03
FOXN3-213ENST00000556916 A0A1W2PNM2 257 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 H0Y9P7 68 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 K7EQZ3 153 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 DEFB130BP0DP73 79 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 DEFB130AP0DP74 79 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 EGFEM1PQ0D2K5 195 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 NKAPP1Q8N9T2 125 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 DEFB105AQ8NG35 78 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 XAGE1AQ9HD64 81 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 C6orf48Q9UBA6 75 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 LINC01558Q9Y6Z2 57 aa2.37□□□□□ -2.03
FOXN3-213ENST00000556916 DMXL2Q8TDJ6 3036 aa2.36□□□□□ -2.03
FOXN3-213ENST00000556916 FREM2Q5SZK8 3169 aa2.36□□□□□ -2.03
FOXN3-213ENST00000556916 PRB2P02812 416 aaPredicted RBP2.36□□□□□ -2.03
FOXN3-213ENST00000556916 KRTAP10-1P60331 282 aa2.36□□□□□ -2.03
FOXN3-213ENST00000556916 MOBPQ13875 183 aa2.36□□□□□ -2.03
FOXN3-213ENST00000556916 ASB16-AS1Q495Z4 193 aa2.36□□□□□ -2.03
FOXN3-213ENST00000556916 COA5Q86WW8 74 aa2.36□□□□□ -2.03
FOXN3-213ENST00000556916 CAMK2N2Q96S95 79 aa2.36□□□□□ -2.03
FOXN3-213ENST00000556916 RP1L1Q8IWN7 2480 aaPredicted RBP2.36□□□□□ -2.03
FOXN3-213ENST00000556916 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.35□□□□□ -2.03
FOXN3-213ENST00000556916 IGKV2D-24A0A075B6R9 120 aa2.35□□□□□ -2.03
FOXN3-213ENST00000556916 A0A096LPF7 62 aa2.35□□□□□ -2.03
FOXN3-213ENST00000556916 FAM168BA1KXE4 195 aa2.35□□□□□ -2.03
FOXN3-213ENST00000556916 LELP1Q5T871 98 aa2.35□□□□□ -2.03
FOXN3-213ENST00000556916 CASC2Q6XLA1 102 aa2.35□□□□□ -2.03
FOXN3-213ENST00000556916 WFDC13Q8IUB5 93 aa2.35□□□□□ -2.03
FOXN3-213ENST00000556916 KRTAP11-1Q8IUC1 163 aa2.35□□□□□ -2.03
FOXN3-213ENST00000556916 C9orf163Q8N9P6 203 aa2.35□□□□□ -2.03
FOXN3-213ENST00000556916 SPEGQ15772 3267 aa2.34□□□□□ -2.03
FOXN3-213ENST00000556916 DCHS1Q96JQ0 3298 aa2.34□□□□□ -2.03
FOXN3-213ENST00000556916 WDFY3Q8IZQ1 3526 aa2.34□□□□□ -2.03
FOXN3-213ENST00000556916 IGLV1-51P01701 117 aa2.34□□□□□ -2.03
FOXN3-213ENST00000556916 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
FOXN3-213ENST00000556916 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
FOXN3-213ENST00000556916 PLAC8Q9NZF1 115 aa2.34□□□□□ -2.03
FOXN3-213ENST00000556916 CEP290O15078 2479 aa2.34□□□□□ -2.04
FOXN3-213ENST00000556916 UNC79Q9P2D8 2635 aa2.34□□□□□ -2.04
FOXN3-213ENST00000556916 PTPRZ1P23471 2315 aaPredicted RBP2.34□□□□□ -2.04
FOXN3-213ENST00000556916 SPTBN5Q9NRC6 3674 aaKnown RBP2.33□□□□□ -2.04
FOXN3-213ENST00000556916 VCANP13611 3396 aa2.33□□□□□ -2.04
FOXN3-213ENST00000556916 CDH23Q9H251 3354 aa2.33□□□□□ -2.04
FOXN3-213ENST00000556916 PRUNE2Q8WUY3 3088 aa2.33□□□□□ -2.04
FOXN3-213ENST00000556916 CNBPP62633 177 aaKnown RBP2.33□□□□□ -2.04
FOXN3-213ENST00000556916 LINC01554Q52M75 96 aa2.33□□□□□ -2.04
FOXN3-213ENST00000556916 Q6ZRX8 168 aa2.33□□□□□ -2.04
FOXN3-213ENST00000556916 WFDC10BQ8IUB3 73 aa2.33□□□□□ -2.04
FOXN3-213ENST00000556916 DEFB123Q8N688 67 aa2.33□□□□□ -2.04
FOXN3-213ENST00000556916 C7orf33Q8WU49 177 aa2.33□□□□□ -2.04
FOXN3-213ENST00000556916 WDFY4Q6ZS81 3184 aa2.33□□□□□ -2.04
FOXN3-213ENST00000556916 TACC2O95359 2948 aa2.32□□□□□ -2.04
FOXN3-213ENST00000556916 CELSR3Q9NYQ7 3312 aa2.32□□□□□ -2.04
FOXN3-213ENST00000556916 MAP1BP46821 2468 aaKnown RBP2.32□□□□□ -2.04
FOXN3-213ENST00000556916 AKAP13Q12802 2813 aa2.31□□□□□ -2.04
FOXN3-213ENST00000556916 IGLV8-61A0A075B6I0 122 aa2.31□□□□□ -2.04
FOXN3-213ENST00000556916 IGLV1-50A0A075B6I6 118 aa2.31□□□□□ -2.04
FOXN3-213ENST00000556916 KRTAP4-16G5E9R7 235 aaPredicted RBP2.31□□□□□ -2.04
FOXN3-213ENST00000556916 TLX1NBP0CAT3 122 aa2.31□□□□□ -2.04
FOXN3-213ENST00000556916 SPRR1AP35321 89 aa2.31□□□□□ -2.04
FOXN3-213ENST00000556916 LINC00313P59037 77 aa2.31□□□□□ -2.04
FOXN3-213ENST00000556916 DEFB116Q30KQ4 102 aa2.31□□□□□ -2.04
FOXN3-213ENST00000556916 TP53AIP1Q9HCN2 124 aa2.31□□□□□ -2.04
FOXN3-213ENST00000556916 LRBAP50851 2863 aa2.31□□□□□ -2.04
FOXN3-213ENST00000556916 HRNRQ86YZ3 2850 aaPredicted RBP2.31□□□□□ -2.04
FOXN3-213ENST00000556916 DCHS2Q6V1P9 2916 aa2.31□□□□□ -2.04
FOXN3-213ENST00000556916 A8MWP4 228 aa2.3□□□□□ -2.04
FOXN3-213ENST00000556916 SPINK7P58062 85 aa2.3□□□□□ -2.04
FOXN3-213ENST00000556916 SPAG11AQ6PDA7 123 aa2.3□□□□□ -2.04
FOXN3-213ENST00000556916 IGFL1Q6UW32 110 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms