RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 KCNQ1DNQ9H478 68 aa6.84□□□□□ -1.31
SLIRP-205ENST00000556310 SPANXB1Q9NS25 103 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-205ENST00000556310 LRP2P98164 4655 aa6.83□□□□□ -1.32
SLIRP-205ENST00000556310 TRBV10-3A0A0K0K1G6 114 aa6.83□□□□□ -1.32
SLIRP-205ENST00000556310 NDUFC2O95298 119 aa6.83□□□□□ -1.32
SLIRP-205ENST00000556310 CRYGAP11844 174 aa6.83□□□□□ -1.32
SLIRP-205ENST00000556310 FAM229BQ4G0N7 80 aa6.83□□□□□ -1.32
SLIRP-205ENST00000556310 LINC00337Q8N6G1 96 aa6.83□□□□□ -1.32
SLIRP-205ENST00000556310 ZNF815PA8K554 130 aa6.82□□□□□ -1.32
SLIRP-205ENST00000556310 TIMM17BO60830 172 aa6.82□□□□□ -1.32
SLIRP-205ENST00000556310 AKR1D1P51857 326 aa6.82□□□□□ -1.32
SLIRP-205ENST00000556310 S100A12P80511 92 aa6.82□□□□□ -1.32
SLIRP-205ENST00000556310 ADAMTSL4-AS1Q5T5F5 129 aa6.82□□□□□ -1.32
SLIRP-205ENST00000556310 SOSTDC1Q6X4U4 206 aa6.82□□□□□ -1.32
SLIRP-205ENST00000556310 HIGD2AQ9BW72 106 aa6.82□□□□□ -1.32
SLIRP-205ENST00000556310 KRTAP4-16G5E9R7 235 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-205ENST00000556310 DDTP30046 118 aa6.81□□□□□ -1.32
SLIRP-205ENST00000556310 LITAFQ99732 161 aa6.81□□□□□ -1.32
SLIRP-205ENST00000556310 ANAPC11Q9NYG5 84 aa6.81□□□□□ -1.32
SLIRP-205ENST00000556310 ETDCA0A1B0GVM5 59 aa6.8□□□□□ -1.32
SLIRP-205ENST00000556310 NPC2P61916 151 aa6.8□□□□□ -1.32
SLIRP-205ENST00000556310 HIST3H2BBQ8N257 126 aa6.8□□□□□ -1.32
SLIRP-205ENST00000556310 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
SLIRP-205ENST00000556310 TTTY13Q9BZ97 58 aa6.8□□□□□ -1.32
SLIRP-205ENST00000556310 IGLV6-57P01721 117 aa6.79□□□□□ -1.32
SLIRP-205ENST00000556310 KRTAP13-2Q52LG2 175 aa6.79□□□□□ -1.32
SLIRP-205ENST00000556310 ZNF706Q9Y5V0 76 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-205ENST00000556310 S100A2P29034 98 aa6.78□□□□□ -1.32
SLIRP-205ENST00000556310 S100A7L2Q5SY68 101 aa6.78□□□□□ -1.32
SLIRP-205ENST00000556310 ATOH7Q8N100 152 aa6.78□□□□□ -1.32
SLIRP-205ENST00000556310 LINC00308Q8TCZ7 52 aa6.78□□□□□ -1.32
SLIRP-205ENST00000556310 HIST1H2BLQ99880 126 aa6.78□□□□□ -1.32
SLIRP-205ENST00000556310 SPANXCQ9NY87 97 aa6.78□□□□□ -1.32
SLIRP-205ENST00000556310 SPRR4Q96PI1 79 aa6.77□□□□□ -1.33
SLIRP-205ENST00000556310 TRAV23DV6A0A075B6W5 121 aa6.76□□□□□ -1.33
SLIRP-205ENST00000556310 S100A6P06703 90 aa6.76□□□□□ -1.33
SLIRP-205ENST00000556310 SMCR5Q8TEV8 140 aa6.76□□□□□ -1.33
SLIRP-205ENST00000556310 SNRPEP62304 92 aaKnown RBP6.75□□□□□ -1.33
SLIRP-205ENST00000556310 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
SLIRP-205ENST00000556310 Q6ZRX8 168 aa6.75□□□□□ -1.33
SLIRP-205ENST00000556310 SPANXDQ9BXN6 97 aa6.75□□□□□ -1.33
SLIRP-205ENST00000556310 CBY1Q9Y3M2 126 aa6.75□□□□□ -1.33
SLIRP-205ENST00000556310 TRIAP1O43715 76 aa6.74□□□□□ -1.33
SLIRP-205ENST00000556310 ZNF73O43830 326 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-205ENST00000556310 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
SLIRP-205ENST00000556310 C3orf22Q8N5N4 141 aa6.73□□□□□ -1.33
SLIRP-205ENST00000556310 LINC00304Q8N9R0 145 aa6.73□□□□□ -1.33
SLIRP-205ENST00000556310 COPS9Q8WXC6 57 aa6.73□□□□□ -1.33
SLIRP-205ENST00000556310 PPDPFQ9H3Y8 114 aa6.73□□□□□ -1.33
SLIRP-205ENST00000556310 TSPAN13O95857 204 aa6.72□□□□□ -1.33
SLIRP-205ENST00000556310 JOSD1Q15040 202 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-205ENST00000556310 Q6ZVH6 145 aa6.72□□□□□ -1.33
SLIRP-205ENST00000556310 Q9BRP9 147 aa6.72□□□□□ -1.33
SLIRP-205ENST00000556310 LPAP08519 4548 aa6.71□□□□□ -1.33
SLIRP-205ENST00000556310 ERC2-IT1O76042 136 aa6.71□□□□□ -1.34
SLIRP-205ENST00000556310 IFITM1P13164 125 aa6.71□□□□□ -1.34
SLIRP-205ENST00000556310 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
SLIRP-205ENST00000556310 LINC00518Q8N0U6 118 aa6.71□□□□□ -1.34
SLIRP-205ENST00000556310 OR13C6PQ8NH95 151 aa6.71□□□□□ -1.34
SLIRP-205ENST00000556310 SVIPQ8NHG7 77 aa6.71□□□□□ -1.34
SLIRP-205ENST00000556310 HSBP1L1C9JCN9 74 aa6.7□□□□□ -1.34
SLIRP-205ENST00000556310 CTAG1AP78358 180 aa6.7□□□□□ -1.34
SLIRP-205ENST00000556310 PRR4Q16378 134 aa6.7□□□□□ -1.34
SLIRP-205ENST00000556310 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
SLIRP-205ENST00000556310 C5orf52A6NGY3 159 aa6.69□□□□□ -1.34
SLIRP-205ENST00000556310 HINT1P49773 126 aaPredicted RBP6.69□□□□□ -1.34
SLIRP-205ENST00000556310 GAGE2AQ6NT46 116 aa6.68□□□□□ -1.34
SLIRP-205ENST00000556310 SPAG11AQ6PDA7 123 aa6.67□□□□□ -1.34
SLIRP-205ENST00000556310 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
SLIRP-205ENST00000556310 MUSTN1Q8IVN3 82 aa6.66□□□□□ -1.34
SLIRP-205ENST00000556310 SCGB1D1O95968 90 aa6.65□□□□□ -1.34
SLIRP-205ENST00000556310 ELOF1P60002 83 aaKnown RBP6.65□□□□□ -1.34
SLIRP-205ENST00000556310 C6orf99Q4VX62 202 aa6.65□□□□□ -1.34
SLIRP-205ENST00000556310 LCE1DQ5T752 114 aa6.65□□□□□ -1.34
SLIRP-205ENST00000556310 Q8NBF4 154 aa6.65□□□□□ -1.34
SLIRP-205ENST00000556310 DHRS4-AS1Q9P1J3 65 aa6.65□□□□□ -1.34
SLIRP-205ENST00000556310 COX7BP24311 80 aa6.64□□□□□ -1.35
SLIRP-205ENST00000556310 IGLV9-49A0A0B4J1Y8 123 aa6.63□□□□□ -1.35
SLIRP-205ENST00000556310 TRBV7-6A0A0J9YX20 115 aa6.63□□□□□ -1.35
SLIRP-205ENST00000556310 A6NDN8 102 aa6.63□□□□□ -1.35
SLIRP-205ENST00000556310 MOBPQ13875 183 aa6.63□□□□□ -1.35
SLIRP-205ENST00000556310 ST20-AS1Q8NBB2 130 aa6.63□□□□□ -1.35
SLIRP-205ENST00000556310 RETNLBQ9BQ08 111 aa6.63□□□□□ -1.35
SLIRP-205ENST00000556310 TRAV13-2A0A0B4J235 113 aa6.62□□□□□ -1.35
SLIRP-205ENST00000556310 SSBP3-AS1Q7Z2R9 100 aa6.62□□□□□ -1.35
SLIRP-205ENST00000556310 A0A1B0GWB2 263 aa6.61□□□□□ -1.35
SLIRP-205ENST00000556310 SPRR1BP22528 89 aa6.61□□□□□ -1.35
SLIRP-205ENST00000556310 SPINK1P00995 79 aa6.6□□□□□ -1.35
SLIRP-205ENST00000556310 COX8AP10176 69 aa6.6□□□□□ -1.35
SLIRP-205ENST00000556310 C9orf153Q5TBE3 101 aa6.6□□□□□ -1.35
SLIRP-205ENST00000556310 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
SLIRP-205ENST00000556310 SLC25A34Q6PIV7 304 aa6.59□□□□□ -1.35
SLIRP-205ENST00000556310 A4D1N5 150 aa6.58□□□□□ -1.36
SLIRP-205ENST00000556310 DLEU1O43261 78 aa6.58□□□□□ -1.36
SLIRP-205ENST00000556310 RPS29P62273 56 aaKnown RBP6.58□□□□□ -1.36
SLIRP-205ENST00000556310 SMIM11BQ8TCY0 68 aa6.58□□□□□ -1.36
SLIRP-205ENST00000556310 IGLV7-46A0A075B6I9 117 aa6.57□□□□□ -1.36
SLIRP-205ENST00000556310 TPRXLQ17RH7 258 aa6.57□□□□□ -1.36
SLIRP-205ENST00000556310 FP248Q71RG6 208 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-205ENST00000556310 SPATA45Q537H7 98 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms