RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 MYCBP2O75592 4640 aa8.65□□□□□ -1.03
SNX6-206ENST00000556162 ZNF861PO60384 105 aa8.64□□□□□ -1.03
SNX6-206ENST00000556162 IGLV6-57P01721 117 aa8.64□□□□□ -1.03
SNX6-206ENST00000556162 RPL28P46779 137 aaKnown RBP8.64□□□□□ -1.03
SNX6-206ENST00000556162 UBE2AP49459 152 aa8.64□□□□□ -1.03
SNX6-206ENST00000556162 FLG2Q5D862 2391 aaPredicted RBP8.63□□□□□ -1.03
SNX6-206ENST00000556162 FAM19A1Q7Z5A9 133 aa8.63□□□□□ -1.03
SNX6-206ENST00000556162 CBY1Q9Y3M2 126 aa8.63□□□□□ -1.03
SNX6-206ENST00000556162 C2orf91Q6ZV80 131 aa8.62□□□□□ -1.03
SNX6-206ENST00000556162 DIRC1Q969H9 104 aa8.62□□□□□ -1.03
SNX6-206ENST00000556162 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
SNX6-206ENST00000556162 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
SNX6-206ENST00000556162 A4D1N5 150 aa8.61□□□□□ -1.03
SNX6-206ENST00000556162 SPRR1AP35321 89 aa8.61□□□□□ -1.03
SNX6-206ENST00000556162 FAT3Q8TDW7 4589 aa8.61□□□□□ -1.03
SNX6-206ENST00000556162 LRP1Q07954 4544 aaKnown RBP8.6□□□□□ -1.03
SNX6-206ENST00000556162 A6NDN8 102 aa8.6□□□□□ -1.03
SNX6-206ENST00000556162 ETDCA0A1B0GVM5 59 aa8.6□□□□□ -1.03
SNX6-206ENST00000556162 PRLHP81277 87 aa8.6□□□□□ -1.03
SNX6-206ENST00000556162 TRAV13-2A0A0B4J235 113 aa8.59□□□□□ -1.03
SNX6-206ENST00000556162 H0Y9J4 135 aa8.59□□□□□ -1.03
SNX6-206ENST00000556162 TAL2Q16559 108 aa8.59□□□□□ -1.03
SNX6-206ENST00000556162 KRTAP13-1Q8IUC0 172 aa8.59□□□□□ -1.03
SNX6-206ENST00000556162 KRTAP4-16G5E9R7 235 aaPredicted RBP8.57□□□□□ -1.04
SNX6-206ENST00000556162 ZNF73O43830 326 aaPredicted RBP8.57□□□□□ -1.04
SNX6-206ENST00000556162 COL5A1-AS1Q5SY13 56 aa8.57□□□□□ -1.04
SNX6-206ENST00000556162 HINT1P49773 126 aaPredicted RBP8.57□□□□□ -1.04
SNX6-206ENST00000556162 BATFQ16520 125 aa8.56□□□□□ -1.04
SNX6-206ENST00000556162 CEND1Q8N111 149 aa8.56□□□□□ -1.04
SNX6-206ENST00000556162 OXTP01178 125 aa8.55□□□□□ -1.04
SNX6-206ENST00000556162 B5MCH6 92 aa8.55□□□□□ -1.04
SNX6-206ENST00000556162 HIGD2AQ9BW72 106 aa8.55□□□□□ -1.04
SNX6-206ENST00000556162 KRTAP29-1A8MX34 341 aaPredicted RBP8.53□□□□□ -1.04
SNX6-206ENST00000556162 HSD52Q0P140 79 aa8.53□□□□□ -1.04
SNX6-206ENST00000556162 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
SNX6-206ENST00000556162 A6NJY4 79 aa8.53□□□□□ -1.04
SNX6-206ENST00000556162 C6orf99Q4VX62 202 aa8.53□□□□□ -1.04
SNX6-206ENST00000556162 Q6ZRX8 168 aa8.53□□□□□ -1.04
SNX6-206ENST00000556162 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
SNX6-206ENST00000556162 CFC1P0CG37 223 aa8.51□□□□□ -1.05
SNX6-206ENST00000556162 RAB37Q96AX2 223 aa8.51□□□□□ -1.05
SNX6-206ENST00000556162 LINC01600Q96MT4 127 aa8.51□□□□□ -1.05
SNX6-206ENST00000556162 SMIM11BQ8TCY0 68 aa8.51□□□□□ -1.05
SNX6-206ENST00000556162 J3QL48 77 aa8.5□□□□□ -1.05
SNX6-206ENST00000556162 RPL13AP40429 203 aaKnown RBP8.5□□□□□ -1.05
SNX6-206ENST00000556162 FXYD2P54710 66 aa8.5□□□□□ -1.05
SNX6-206ENST00000556162 SMCR5Q8TEV8 140 aa8.5□□□□□ -1.05
SNX6-206ENST00000556162 A0A0B4J2C4 111 aa8.49□□□□□ -1.05
SNX6-206ENST00000556162 COX7BP24311 80 aa8.49□□□□□ -1.05
SNX6-206ENST00000556162 TRBV7-6A0A0J9YX20 115 aa8.49□□□□□ -1.05
SNX6-206ENST00000556162 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
SNX6-206ENST00000556162 Q9BRP9 147 aa8.49□□□□□ -1.05
SNX6-206ENST00000556162 ELOF1P60002 83 aaKnown RBP8.48□□□□□ -1.05
SNX6-206ENST00000556162 A0A1B0GWB2 263 aa8.47□□□□□ -1.05
SNX6-206ENST00000556162 ZNF706Q9Y5V0 76 aaPredicted RBP8.47□□□□□ -1.05
SNX6-206ENST00000556162 TNXBP22105 4242 aa8.47□□□□□ -1.05
SNX6-206ENST00000556162 VAMP3Q15836 100 aa8.47□□□□□ -1.05
SNX6-206ENST00000556162 DHRS4-AS1Q9P1J3 65 aa8.47□□□□□ -1.05
SNX6-206ENST00000556162 H7C2G1 150 aa8.46□□□□□ -1.06
SNX6-206ENST00000556162 PRO1854Q9UHT4 67 aa8.46□□□□□ -1.06
SNX6-206ENST00000556162 ERC2-IT1O76042 136 aa8.45□□□□□ -1.06
SNX6-206ENST00000556162 NHP2Q9NX24 153 aaKnown RBP8.45□□□□□ -1.06
SNX6-206ENST00000556162 PRR26Q8N8Z3 221 aa8.45□□□□□ -1.06
SNX6-206ENST00000556162 SPRR4Q96PI1 79 aa8.45□□□□□ -1.06
SNX6-206ENST00000556162 DMBT1Q9UGM3 2413 aaPredicted RBP8.44□□□□□ -1.06
SNX6-206ENST00000556162 BVES-AS1Q5T3Y7 98 aa8.44□□□□□ -1.06
SNX6-206ENST00000556162 ANAPC11Q9NYG5 84 aa8.44□□□□□ -1.06
SNX6-206ENST00000556162 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
SNX6-206ENST00000556162 CRYGAP11844 174 aa8.43□□□□□ -1.06
SNX6-206ENST00000556162 KRTAP10-8P60410 259 aa8.43□□□□□ -1.06
SNX6-206ENST00000556162 Q1RN00 199 aa8.43□□□□□ -1.06
SNX6-206ENST00000556162 FAM229BQ4G0N7 80 aa8.42□□□□□ -1.06
SNX6-206ENST00000556162 GAGE2AQ6NT46 116 aa8.41□□□□□ -1.06
SNX6-206ENST00000556162 HERC1Q15751 4861 aa8.41□□□□□ -1.06
SNX6-206ENST00000556162 SLC25A20O43772 301 aa8.4□□□□□ -1.06
SNX6-206ENST00000556162 A0A087X002 238 aa8.4□□□□□ -1.07
SNX6-206ENST00000556162 K7ERJ3 54 aa8.4□□□□□ -1.07
SNX6-206ENST00000556162 ST20-AS1Q8NBB2 130 aa8.39□□□□□ -1.07
SNX6-206ENST00000556162 LINC00483Q53H64 154 aa8.38□□□□□ -1.07
SNX6-206ENST00000556162 LINC00575Q6W349 94 aa8.38□□□□□ -1.07
SNX6-206ENST00000556162 UBE2V1Q13404 147 aa8.37□□□□□ -1.07
SNX6-206ENST00000556162 H0YGX0 51 aa8.36□□□□□ -1.07
SNX6-206ENST00000556162 TYMSOSQ8TAI1 123 aa8.36□□□□□ -1.07
SNX6-206ENST00000556162 hADV29S1A0JD25 119 aa8.36□□□□□ -1.07
SNX6-206ENST00000556162 TAX1BP3O14907 124 aa8.36□□□□□ -1.07
SNX6-206ENST00000556162 KRTAP13-2Q52LG2 175 aa8.36□□□□□ -1.07
SNX6-206ENST00000556162 DEFB105AQ8NG35 78 aa8.35□□□□□ -1.07
SNX6-206ENST00000556162 SNCGO76070 127 aa8.34□□□□□ -1.07
SNX6-206ENST00000556162 PSMB2P49721 201 aa8.34□□□□□ -1.07
SNX6-206ENST00000556162 TSPAN13O95857 204 aa8.34□□□□□ -1.07
SNX6-206ENST00000556162 TRIAP1O43715 76 aa8.33□□□□□ -1.08
SNX6-206ENST00000556162 SPRR1BP22528 89 aa8.33□□□□□ -1.08
SNX6-206ENST00000556162 C3orf22Q8N5N4 141 aa8.33□□□□□ -1.08
SNX6-206ENST00000556162 TEX49A0A1B0GTD5 131 aa8.32□□□□□ -1.08
SNX6-206ENST00000556162 COX6CP09669 75 aa8.32□□□□□ -1.08
SNX6-206ENST00000556162 Q6ZQY7 126 aa8.31□□□□□ -1.08
SNX6-206ENST00000556162 IGLV5-48A0A075B6I7 105 aa8.3□□□□□ -1.08
SNX6-206ENST00000556162 IGLV9-49A0A0B4J1Y8 123 aa8.3□□□□□ -1.08
SNX6-206ENST00000556162 LAMTOR3Q9UHA4 124 aa8.3□□□□□ -1.08
SNX6-206ENST00000556162 LINC01547P58512 204 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms