RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SEC61BP60468 96 aaKnown RBP11.02□□□□□ -0.65
PRKCH-219ENST00000555906 SOSTDC1Q6X4U4 206 aa11.02□□□□□ -0.65
PRKCH-219ENST00000555906 ZNF73O43830 326 aaPredicted RBP11.01□□□□□ -0.65
PRKCH-219ENST00000555906 A0A0J9YXY3 114 aa11□□□□□ -0.65
PRKCH-219ENST00000555906 C9orf153Q5TBE3 101 aa11□□□□□ -0.65
PRKCH-219ENST00000555906 E9PLD3 99 aa10.99□□□□□ -0.65
PRKCH-219ENST00000555906 EIF4EBP3O60516 100 aaPredicted RBP10.99□□□□□ -0.65
PRKCH-219ENST00000555906 CBY1Q9Y3M2 126 aa10.99□□□□□ -0.65
PRKCH-219ENST00000555906 C5orf52A6NGY3 159 aa10.98□□□□□ -0.65
PRKCH-219ENST00000555906 NPC2P61916 151 aa10.98□□□□□ -0.65
PRKCH-219ENST00000555906 ADAMTSL4-AS1Q5T5F5 129 aa10.98□□□□□ -0.65
PRKCH-219ENST00000555906 KRTAP4-1Q9BYQ7 146 aa10.97□□□□□ -0.65
PRKCH-219ENST00000555906 XP32Q5T750 250 aa10.95□□□□□ -0.66
PRKCH-219ENST00000555906 ST20-AS1Q8NBB2 130 aa10.95□□□□□ -0.66
PRKCH-219ENST00000555906 HINT1P49773 126 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-219ENST00000555906 LINC01547P58512 204 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-219ENST00000555906 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
PRKCH-219ENST00000555906 LITAFQ99732 161 aa10.93□□□□□ -0.66
PRKCH-219ENST00000555906 COLCA2A8K830 154 aa10.92□□□□□ -0.66
PRKCH-219ENST00000555906 KRTAP9-6A0A140TA67 174 aa10.91□□□□□ -0.66
PRKCH-219ENST00000555906 TIMM17BO60830 172 aa10.91□□□□□ -0.66
PRKCH-219ENST00000555906 SPRR1BP22528 89 aa10.91□□□□□ -0.66
PRKCH-219ENST00000555906 LINC00308Q8TCZ7 52 aa10.91□□□□□ -0.66
PRKCH-219ENST00000555906 SYS1-DBNDD2H3BUS1 97 aa10.9□□□□□ -0.66
PRKCH-219ENST00000555906 SLC25A34Q6PIV7 304 aa10.89□□□□□ -0.67
PRKCH-219ENST00000555906 DHRS4-AS1Q9P1J3 65 aa10.89□□□□□ -0.67
PRKCH-219ENST00000555906 LIMD2Q9BT23 127 aa10.88□□□□□ -0.67
PRKCH-219ENST00000555906 SPANXDQ9BXN6 97 aa10.88□□□□□ -0.67
PRKCH-219ENST00000555906 OR13C6PQ8NH95 151 aa10.87□□□□□ -0.67
PRKCH-219ENST00000555906 LINC01545Q5VT33 79 aa10.86□□□□□ -0.67
PRKCH-219ENST00000555906 ZNF815PA8K554 130 aa10.84□□□□□ -0.67
PRKCH-219ENST00000555906 ELOF1P60002 83 aaKnown RBP10.84□□□□□ -0.67
PRKCH-219ENST00000555906 LAMTOR3Q9UHA4 124 aa10.83□□□□□ -0.68
PRKCH-219ENST00000555906 HIST1H2BKO60814 126 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 HIST1H2BJP06899 126 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 HIST1H2BOP23527 126 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 HIST1H2BBP33778 126 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 HIST1H2BDP58876 126 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 HIST1H2BCP62807 126 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 HIST2H2BEQ16778 126 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.82□□□□□ -0.68
PRKCH-219ENST00000555906 PET117Q6UWS5 81 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 SLC7A5P1Q8MH63 180 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 HIST1H2BHQ93079 126 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 HIST1H2BNQ99877 126 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 HIST1H2BMQ99879 126 aa10.82□□□□□ -0.68
PRKCH-219ENST00000555906 COX7BP24311 80 aa10.81□□□□□ -0.68
PRKCH-219ENST00000555906 LINC00518Q8N0U6 118 aa10.81□□□□□ -0.68
PRKCH-219ENST00000555906 C6orf99Q4VX62 202 aa10.8□□□□□ -0.68
PRKCH-219ENST00000555906 HRCT1Q6UXD1 115 aa10.8□□□□□ -0.68
PRKCH-219ENST00000555906 TTTY13Q9BZ97 58 aa10.79□□□□□ -0.68
PRKCH-219ENST00000555906 CD164Q04900 197 aa10.77□□□□□ -0.69
PRKCH-219ENST00000555906 TRBV7-6A0A0J9YX20 115 aa10.75□□□□□ -0.69
PRKCH-219ENST00000555906 Q1RN00 199 aa10.75□□□□□ -0.69
PRKCH-219ENST00000555906 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
PRKCH-219ENST00000555906 TEX49A0A1B0GTD5 131 aa10.74□□□□□ -0.69
PRKCH-219ENST00000555906 C3orf79P0CE67 100 aa10.74□□□□□ -0.69
PRKCH-219ENST00000555906 TAL2Q16559 108 aa10.74□□□□□ -0.69
PRKCH-219ENST00000555906 LCE2CQ5TA81 110 aa10.74□□□□□ -0.69
PRKCH-219ENST00000555906 PRO1933Q9H354 126 aa10.74□□□□□ -0.69
PRKCH-219ENST00000555906 A0A1B0GWB2 263 aa10.72□□□□□ -0.69
PRKCH-219ENST00000555906 C9orf92A6NGG3 77 aa10.72□□□□□ -0.69
PRKCH-219ENST00000555906 KRTAP19-2Q3LHN2 52 aa10.72□□□□□ -0.69
PRKCH-219ENST00000555906 PCOTHQ58A44 107 aa10.72□□□□□ -0.69
PRKCH-219ENST00000555906 SCGB1D4Q6XE38 83 aa10.72□□□□□ -0.69
PRKCH-219ENST00000555906 DEFB105AQ8NG35 78 aa10.72□□□□□ -0.69
PRKCH-219ENST00000555906 COPS9Q8WXC6 57 aa10.72□□□□□ -0.69
PRKCH-219ENST00000555906 Q5XG85 94 aa10.71□□□□□ -0.69
PRKCH-219ENST00000555906 IGLV5-48A0A075B6I7 105 aa10.7□□□□□ -0.7
PRKCH-219ENST00000555906 H7C2G1 150 aa10.7□□□□□ -0.7
PRKCH-219ENST00000555906 IGLV8-61A0A075B6I0 122 aa10.69□□□□□ -0.7
PRKCH-219ENST00000555906 IFITM1P13164 125 aa10.69□□□□□ -0.7
PRKCH-219ENST00000555906 SMIM29Q86T20 159 aa10.69□□□□□ -0.7
PRKCH-219ENST00000555906 KRTDAPP60985 99 aa10.68□□□□□ -0.7
PRKCH-219ENST00000555906 COA6Q5JTJ3 125 aaKnown RBP10.68□□□□□ -0.7
PRKCH-219ENST00000555906 C20orf202A1L168 122 aa10.67□□□□□ -0.7
PRKCH-219ENST00000555906 Q6ZVH6 145 aa10.67□□□□□ -0.7
PRKCH-219ENST00000555906 AKR1D1P51857 326 aa10.66□□□□□ -0.7
PRKCH-219ENST00000555906 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
PRKCH-219ENST00000555906 A6NDN8 102 aa10.65□□□□□ -0.7
PRKCH-219ENST00000555906 A4D1N5 150 aa10.64□□□□□ -0.71
PRKCH-219ENST00000555906 MT1HP80294 61 aa10.64□□□□□ -0.71
PRKCH-219ENST00000555906 C1orf195Q5TG92 126 aa10.63□□□□□ -0.71
PRKCH-219ENST00000555906 NHP2Q9NX24 153 aaKnown RBP10.62□□□□□ -0.71
PRKCH-219ENST00000555906 MUSTN1Q8IVN3 82 aa10.61□□□□□ -0.71
PRKCH-219ENST00000555906 TRAV13-2A0A0B4J235 113 aa10.6□□□□□ -0.71
PRKCH-219ENST00000555906 CFC1BP0CG36 223 aa10.6□□□□□ -0.71
PRKCH-219ENST00000555906 A0A0G2JQZ4 141 aa10.59□□□□□ -0.71
PRKCH-219ENST00000555906 PCP2Q8IVA1 136 aa10.59□□□□□ -0.71
PRKCH-219ENST00000555906 ATOH7Q8N100 152 aa10.59□□□□□ -0.71
PRKCH-219ENST00000555906 SMIM11BQ8TCY0 68 aa10.58□□□□□ -0.72
PRKCH-219ENST00000555906 FSIP2Q5CZC0 6907 aa10.57□□□□□ -0.72
PRKCH-219ENST00000555906 RPL37P61927 97 aaKnown RBP10.57□□□□□ -0.72
PRKCH-219ENST00000555906 CRCT1Q9UGL9 99 aa10.55□□□□□ -0.72
PRKCH-219ENST00000555906 TCL1BO95988 128 aa10.54□□□□□ -0.72
PRKCH-219ENST00000555906 SNRPEP62304 92 aaKnown RBP10.53□□□□□ -0.72
PRKCH-219ENST00000555906 F8WEM9 126 aa10.52□□□□□ -0.73
PRKCH-219ENST00000555906 FLGP20930 4061 aaPredicted RBP10.5□□□□□ -0.73
PRKCH-219ENST00000555906 LORP23490 312 aaPredicted RBP10.49□□□□□ -0.73
PRKCH-219ENST00000555906 VAMP3Q15836 100 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms