RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 RPL28P46779 137 aaKnown RBP7.01□□□□□ -1.29
SHMT2-220ENST00000555634 UBE2AP49459 152 aa7.01□□□□□ -1.29
SHMT2-220ENST00000555634 HAMPP81172 84 aa7.01□□□□□ -1.29
SHMT2-220ENST00000555634 C6orf99Q4VX62 202 aa7.01□□□□□ -1.29
SHMT2-220ENST00000555634 FAM19A1Q7Z5A9 133 aa7.01□□□□□ -1.29
SHMT2-220ENST00000555634 PKD1P98161 4303 aa7□□□□□ -1.29
SHMT2-220ENST00000555634 TRBV7-6A0A0J9YX20 115 aa7□□□□□ -1.29
SHMT2-220ENST00000555634 BCE1O60756 84 aa7□□□□□ -1.29
SHMT2-220ENST00000555634 SCGB1C2P0DMR2 95 aa7□□□□□ -1.29
SHMT2-220ENST00000555634 COX7BP24311 80 aa7□□□□□ -1.29
SHMT2-220ENST00000555634 C1orf137Q5JT78 98 aa7□□□□□ -1.29
SHMT2-220ENST00000555634 H0YGX0 51 aa6.99□□□□□ -1.29
SHMT2-220ENST00000555634 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
SHMT2-220ENST00000555634 RPL37AP61513 92 aaKnown RBP6.99□□□□□ -1.29
SHMT2-220ENST00000555634 LINC00528Q8N1L1 170 aa6.99□□□□□ -1.29
SHMT2-220ENST00000555634 FAT2Q9NYQ8 4349 aa6.98□□□□□ -1.29
SHMT2-220ENST00000555634 PLA2G1BP04054 148 aaKnown RBP6.98□□□□□ -1.29
SHMT2-220ENST00000555634 Q6ZRX8 168 aa6.98□□□□□ -1.29
SHMT2-220ENST00000555634 PSORS1C2Q9UIG4 136 aa6.98□□□□□ -1.29
SHMT2-220ENST00000555634 C9orf118A6NHY6 69 aa6.97□□□□□ -1.29
SHMT2-220ENST00000555634 H3BUT2 72 aa6.97□□□□□ -1.29
SHMT2-220ENST00000555634 TRIAP1O43715 76 aa6.97□□□□□ -1.29
SHMT2-220ENST00000555634 DNAL4O96015 105 aa6.97□□□□□ -1.29
SHMT2-220ENST00000555634 FABP2P12104 132 aa6.97□□□□□ -1.29
SHMT2-220ENST00000555634 ELOF1P60002 83 aaKnown RBP6.97□□□□□ -1.29
SHMT2-220ENST00000555634 DHRS4-AS1Q9P1J3 65 aa6.97□□□□□ -1.29
SHMT2-220ENST00000555634 HECTD4Q9Y4D8 3996 aa6.97□□□□□ -1.29
SHMT2-220ENST00000555634 GHRHP01286 108 aa6.96□□□□□ -1.3
SHMT2-220ENST00000555634 SPRR1AP35321 89 aa6.96□□□□□ -1.3
SHMT2-220ENST00000555634 XGP55808 180 aa6.96□□□□□ -1.3
SHMT2-220ENST00000555634 H0Y9J4 135 aa6.95□□□□□ -1.3
SHMT2-220ENST00000555634 TRBV20-1A0A075B6N2 111 aa6.94□□□□□ -1.3
SHMT2-220ENST00000555634 B5MCH6 92 aa6.94□□□□□ -1.3
SHMT2-220ENST00000555634 TAX1BP3O14907 124 aa6.94□□□□□ -1.3
SHMT2-220ENST00000555634 PRLHP81277 87 aa6.94□□□□□ -1.3
SHMT2-220ENST00000555634 HIGD2AQ9BW72 106 aa6.94□□□□□ -1.3
SHMT2-220ENST00000555634 ZNF706Q9Y5V0 76 aaPredicted RBP6.94□□□□□ -1.3
SHMT2-220ENST00000555634 A0A1B0GX51 115 aa6.93□□□□□ -1.3
SHMT2-220ENST00000555634 A0A1W2PPM0 123 aa6.93□□□□□ -1.3
SHMT2-220ENST00000555634 SMR3BP02814 79 aaPredicted RBP6.93□□□□□ -1.3
SHMT2-220ENST00000555634 IGLV7-43P04211 117 aa6.93□□□□□ -1.3
SHMT2-220ENST00000555634 INAFM2P0DMQ5 153 aa6.93□□□□□ -1.3
SHMT2-220ENST00000555634 ATXN8Q156A1 80 aa6.93□□□□□ -1.3
SHMT2-220ENST00000555634 NAA38Q9BRA0 125 aaKnown RBP6.93□□□□□ -1.3
SHMT2-220ENST00000555634 hADV29S1A0JD25 119 aa6.92□□□□□ -1.3
SHMT2-220ENST00000555634 KRTAP4-16G5E9R7 235 aaPredicted RBP6.91□□□□□ -1.3
SHMT2-220ENST00000555634 ZNF861PO60384 105 aa6.91□□□□□ -1.3
SHMT2-220ENST00000555634 GTF2H5Q6ZYL4 71 aa6.91□□□□□ -1.3
SHMT2-220ENST00000555634 KIAA1109Q2LD37 5005 aa6.91□□□□□ -1.3
SHMT2-220ENST00000555634 ABCA13Q86UQ4 5058 aa6.9□□□□□ -1.3
SHMT2-220ENST00000555634 H3BQ85 93 aa6.9□□□□□ -1.3
SHMT2-220ENST00000555634 OCIAD2Q56VL3 154 aa6.9□□□□□ -1.3
SHMT2-220ENST00000555634 LINC00575Q6W349 94 aa6.9□□□□□ -1.3
SHMT2-220ENST00000555634 KRTAP11-1Q8IUC1 163 aa6.9□□□□□ -1.3
SHMT2-220ENST00000555634 CLEC2BQ92478 149 aa6.9□□□□□ -1.3
SHMT2-220ENST00000555634 SPCS1Q9Y6A9 102 aa6.9□□□□□ -1.3
SHMT2-220ENST00000555634 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.31
SHMT2-220ENST00000555634 PKHD1P08F94 4074 aa6.9□□□□□ -1.31
SHMT2-220ENST00000555634 DNAH11Q96DT5 4516 aa6.89□□□□□ -1.31
SHMT2-220ENST00000555634 TRACP01848 142 aa6.89□□□□□ -1.31
SHMT2-220ENST00000555634 Q5VSD8 79 aa6.89□□□□□ -1.31
SHMT2-220ENST00000555634 LST1O00453 97 aa6.88□□□□□ -1.31
SHMT2-220ENST00000555634 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.88□□□□□ -1.31
SHMT2-220ENST00000555634 SPINK6Q6UWN8 80 aa6.87□□□□□ -1.31
SHMT2-220ENST00000555634 ORMDL1Q9P0S3 153 aa6.87□□□□□ -1.31
SHMT2-220ENST00000555634 DNAH5Q8TE73 4624 aa6.87□□□□□ -1.31
SHMT2-220ENST00000555634 Q6ZQY7 126 aa6.86□□□□□ -1.31
SHMT2-220ENST00000555634 KRTAP13-1Q8IUC0 172 aa6.86□□□□□ -1.31
SHMT2-220ENST00000555634 Q8N1X5 172 aa6.86□□□□□ -1.31
SHMT2-220ENST00000555634 SMCR5Q8TEV8 140 aa6.86□□□□□ -1.31
SHMT2-220ENST00000555634 PPDPFLQ8WWR9 84 aa6.86□□□□□ -1.31
SHMT2-220ENST00000555634 Q9BRP9 147 aa6.86□□□□□ -1.31
SHMT2-220ENST00000555634 TCL1BO95988 128 aa6.85□□□□□ -1.31
SHMT2-220ENST00000555634 F8WEM9 126 aa6.84□□□□□ -1.31
SHMT2-220ENST00000555634 K7EP34 96 aa6.84□□□□□ -1.31
SHMT2-220ENST00000555634 FAM218AQ96MZ4 157 aa6.84□□□□□ -1.31
SHMT2-220ENST00000555634 DEFB105AQ8NG35 78 aa6.83□□□□□ -1.32
SHMT2-220ENST00000555634 TEX49A0A1B0GTD5 131 aa6.82□□□□□ -1.32
SHMT2-220ENST00000555634 C9JAW5 83 aa6.82□□□□□ -1.32
SHMT2-220ENST00000555634 TMEM256-PLSCR3K7ERE1 68 aa6.82□□□□□ -1.32
SHMT2-220ENST00000555634 H3BMG7 143 aa6.81□□□□□ -1.32
SHMT2-220ENST00000555634 GAGE2AQ6NT46 116 aa6.81□□□□□ -1.32
SHMT2-220ENST00000555634 SPRR4Q96PI1 79 aa6.8□□□□□ -1.32
SHMT2-220ENST00000555634 LAMTOR3Q9UHA4 124 aa6.8□□□□□ -1.32
SHMT2-220ENST00000555634 HERC1Q15751 4861 aa6.79□□□□□ -1.32
SHMT2-220ENST00000555634 IGLV5-48A0A075B6I7 105 aa6.79□□□□□ -1.32
SHMT2-220ENST00000555634 H3BT86 120 aa6.79□□□□□ -1.32
SHMT2-220ENST00000555634 ERC2-IT1O76042 136 aa6.79□□□□□ -1.32
SHMT2-220ENST00000555634 DYNC1H1Q14204 4646 aaKnown RBP6.78□□□□□ -1.32
SHMT2-220ENST00000555634 ST20-AS1Q8NBB2 130 aa6.78□□□□□ -1.32
SHMT2-220ENST00000555634 LRP1BQ9NZR2 4599 aa6.77□□□□□ -1.33
SHMT2-220ENST00000555634 A0A1B0GV90 55 aa6.77□□□□□ -1.33
SHMT2-220ENST00000555634 BAALC-AS2P0C853 105 aa6.77□□□□□ -1.33
SHMT2-220ENST00000555634 FAM229BQ4G0N7 80 aa6.77□□□□□ -1.33
SHMT2-220ENST00000555634 C9orf153Q5TBE3 101 aa6.77□□□□□ -1.33
SHMT2-220ENST00000555634 CRYGAP11844 174 aa6.76□□□□□ -1.33
SHMT2-220ENST00000555634 UBE2V1Q13404 147 aa6.76□□□□□ -1.33
SHMT2-220ENST00000555634 LINC00483Q53H64 154 aa6.76□□□□□ -1.33
SHMT2-220ENST00000555634 F8W1H4 67 aa6.75□□□□□ -1.33
SHMT2-220ENST00000555634 SPRR1BP22528 89 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms