RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 KRTAP19-1Q8IUB9 90 aa7.91□□□□□ -1.14
PCNX4-209ENST00000555569 Q8NBF4 154 aa7.91□□□□□ -1.14
PCNX4-209ENST00000555569 SYS1-DBNDD2H3BUS1 97 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST1H2BKO60814 126 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 ERC2-IT1O76042 136 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 IGLV6-57P01721 117 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST1H2BJP06899 126 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST1H2BOP23527 126 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST1H2BBP33778 126 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST1H2BDP58876 126 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 NPC2P61916 151 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST1H2BCP62807 126 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST2H2BEQ16778 126 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.9□□□□□ -1.14
PCNX4-209ENST00000555569 GAGE2AQ6NT46 116 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 SOSTDC1Q6X4U4 206 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST1H2BHQ93079 126 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST1H2BNQ99877 126 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 HIST1H2BMQ99879 126 aa7.9□□□□□ -1.14
PCNX4-209ENST00000555569 ADAMTSL4-AS1Q5T5F5 129 aa7.89□□□□□ -1.15
PCNX4-209ENST00000555569 Q6ZRX8 168 aa7.89□□□□□ -1.15
PCNX4-209ENST00000555569 Q9BRP9 147 aa7.89□□□□□ -1.15
PCNX4-209ENST00000555569 CDIP1Q9H305 208 aa7.89□□□□□ -1.15
PCNX4-209ENST00000555569 TRAV23DV6A0A075B6W5 121 aa7.88□□□□□ -1.15
PCNX4-209ENST00000555569 A0A0U1RQV1 116 aa7.88□□□□□ -1.15
PCNX4-209ENST00000555569 EIF4EBP3O60516 100 aaPredicted RBP7.88□□□□□ -1.15
PCNX4-209ENST00000555569 LINC01545Q5VT33 79 aa7.87□□□□□ -1.15
PCNX4-209ENST00000555569 PET117Q6UWS5 81 aa7.86□□□□□ -1.15
PCNX4-209ENST00000555569 FP248Q71RG6 208 aaPredicted RBP7.86□□□□□ -1.15
PCNX4-209ENST00000555569 IGLV9-49A0A0B4J1Y8 123 aa7.85□□□□□ -1.15
PCNX4-209ENST00000555569 SPINK1P00995 79 aa7.85□□□□□ -1.15
PCNX4-209ENST00000555569 MOBPQ13875 183 aa7.85□□□□□ -1.15
PCNX4-209ENST00000555569 JOSD1Q15040 202 aaPredicted RBP7.85□□□□□ -1.15
PCNX4-209ENST00000555569 ZNF73O43830 326 aaPredicted RBP7.84□□□□□ -1.15
PCNX4-209ENST00000555569 TIMM17BO60830 172 aa7.84□□□□□ -1.15
PCNX4-209ENST00000555569 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
PCNX4-209ENST00000555569 LINC00308Q8TCZ7 52 aa7.84□□□□□ -1.15
PCNX4-209ENST00000555569 LITAFQ99732 161 aa7.84□□□□□ -1.15
PCNX4-209ENST00000555569 CBY1Q9Y3M2 126 aa7.84□□□□□ -1.15
PCNX4-209ENST00000555569 MUC2Q02817 5179 aa7.84□□□□□ -1.15
PCNX4-209ENST00000555569 LCE1DQ5T752 114 aa7.83□□□□□ -1.16
PCNX4-209ENST00000555569 SPANXCQ9NY87 97 aa7.83□□□□□ -1.16
PCNX4-209ENST00000555569 ZNF815PA8K554 130 aa7.82□□□□□ -1.16
PCNX4-209ENST00000555569 C3orf79P0CE67 100 aa7.82□□□□□ -1.16
PCNX4-209ENST00000555569 HINT1P49773 126 aaPredicted RBP7.82□□□□□ -1.16
PCNX4-209ENST00000555569 OR13C6PQ8NH95 151 aa7.81□□□□□ -1.16
PCNX4-209ENST00000555569 RPS29P62273 56 aaKnown RBP7.8□□□□□ -1.16
PCNX4-209ENST00000555569 COA6Q5JTJ3 125 aaKnown RBP7.8□□□□□ -1.16
PCNX4-209ENST00000555569 TTTY13Q9BZ97 58 aa7.8□□□□□ -1.16
PCNX4-209ENST00000555569 MUC17Q685J3 4493 aa7.8□□□□□ -1.16
PCNX4-209ENST00000555569 C5orf52A6NGY3 159 aa7.79□□□□□ -1.16
PCNX4-209ENST00000555569 KRTDAPP60985 99 aa7.79□□□□□ -1.16
PCNX4-209ENST00000555569 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
PCNX4-209ENST00000555569 C9orf153Q5TBE3 101 aa7.79□□□□□ -1.16
PCNX4-209ENST00000555569 ST20-AS1Q8NBB2 130 aa7.79□□□□□ -1.16
PCNX4-209ENST00000555569 SPANXDQ9BXN6 97 aa7.79□□□□□ -1.16
PCNX4-209ENST00000555569 Q8N377 158 aa7.78□□□□□ -1.16
PCNX4-209ENST00000555569 LINC00518Q8N0U6 118 aa7.76□□□□□ -1.17
PCNX4-209ENST00000555569 DHRS4-AS1Q9P1J3 65 aa7.76□□□□□ -1.17
PCNX4-209ENST00000555569 C20orf202A1L168 122 aa7.75□□□□□ -1.17
PCNX4-209ENST00000555569 SLC25A20O43772 301 aa7.75□□□□□ -1.17
PCNX4-209ENST00000555569 SPRR1BP22528 89 aa7.74□□□□□ -1.17
PCNX4-209ENST00000555569 SCGB1D4Q6XE38 83 aa7.74□□□□□ -1.17
PCNX4-209ENST00000555569 COX7BP24311 80 aa7.73□□□□□ -1.17
PCNX4-209ENST00000555569 ELOF1P60002 83 aaKnown RBP7.73□□□□□ -1.17
PCNX4-209ENST00000555569 ANKRD39Q53RE8 183 aa7.73□□□□□ -1.17
PCNX4-209ENST00000555569 SLC25A34Q6PIV7 304 aa7.73□□□□□ -1.17
PCNX4-209ENST00000555569 C6orf99Q4VX62 202 aa7.72□□□□□ -1.17
PCNX4-209ENST00000555569 COPS9Q8WXC6 57 aa7.72□□□□□ -1.17
PCNX4-209ENST00000555569 IFITM1P13164 125 aa7.71□□□□□ -1.18
PCNX4-209ENST00000555569 ATOH7Q8N100 152 aa7.71□□□□□ -1.18
PCNX4-209ENST00000555569 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.18
PCNX4-209ENST00000555569 ASB16-AS1Q495Z4 193 aa7.7□□□□□ -1.18
PCNX4-209ENST00000555569 AKR1D1P51857 326 aa7.69□□□□□ -1.18
PCNX4-209ENST00000555569 Q6ZVH6 145 aa7.69□□□□□ -1.18
PCNX4-209ENST00000555569 KRTAP4-9Q9BYQ8 210 aa7.69□□□□□ -1.18
PCNX4-209ENST00000555569 KRTAP4-2Q9BYR5 136 aa7.69□□□□□ -1.18
PCNX4-209ENST00000555569 TRBV7-6A0A0J9YX20 115 aa7.68□□□□□ -1.18
PCNX4-209ENST00000555569 TAL2Q16559 108 aa7.68□□□□□ -1.18
PCNX4-209ENST00000555569 PCP2Q8IVA1 136 aa7.68□□□□□ -1.18
PCNX4-209ENST00000555569 FAT4Q6V0I7 4981 aa7.67□□□□□ -1.18
PCNX4-209ENST00000555569 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
PCNX4-209ENST00000555569 A6NDN8 102 aa7.67□□□□□ -1.18
PCNX4-209ENST00000555569 SEC61BP60468 96 aaKnown RBP7.67□□□□□ -1.18
PCNX4-209ENST00000555569 MUSTN1Q8IVN3 82 aa7.67□□□□□ -1.18
PCNX4-209ENST00000555569 DEFB105AQ8NG35 78 aa7.67□□□□□ -1.18
PCNX4-209ENST00000555569 HRCT1Q6UXD1 115 aa7.66□□□□□ -1.18
PCNX4-209ENST00000555569 LIMD2Q9BT23 127 aa7.66□□□□□ -1.18
PCNX4-209ENST00000555569 TEX49A0A1B0GTD5 131 aa7.65□□□□□ -1.18
PCNX4-209ENST00000555569 SNRPEP62304 92 aaKnown RBP7.65□□□□□ -1.18
PCNX4-209ENST00000555569 Q1RN00 199 aa7.65□□□□□ -1.18
PCNX4-209ENST00000555569 TRAV13-2A0A0B4J235 113 aa7.62□□□□□ -1.19
PCNX4-209ENST00000555569 HIST3H2BBQ8N257 126 aa7.62□□□□□ -1.19
PCNX4-209ENST00000555569 KRTAP4-1Q9BYQ7 146 aa7.62□□□□□ -1.19
PCNX4-209ENST00000555569 PRO1933Q9H354 126 aa7.62□□□□□ -1.19
PCNX4-209ENST00000555569 A4D1N5 150 aa7.61□□□□□ -1.19
PCNX4-209ENST00000555569 S100A2P29034 98 aa7.61□□□□□ -1.19
PCNX4-209ENST00000555569 LINC01547P58512 204 aaPredicted RBP7.61□□□□□ -1.19
PCNX4-209ENST00000555569 CD164Q04900 197 aa7.61□□□□□ -1.19
PCNX4-209ENST00000555569 SMIM29Q86T20 159 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms