RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 LY75O60449 1722 aa1.03□□□□□ -2.24
VRK1-205ENST00000555402 CROCC2H7BZ55 1655 aa1.02□□□□□ -2.25
VRK1-205ENST00000555402 GOLGA4Q13439 2230 aaKnown RBP1.02□□□□□ -2.25
VRK1-205ENST00000555402 FXYD6Q9H0Q3 95 aa1.02□□□□□ -2.25
VRK1-205ENST00000555402 MAST1Q9Y2H9 1570 aa1.02□□□□□ -2.25
VRK1-205ENST00000555402 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
VRK1-205ENST00000555402 SPRR1BP22528 89 aa1.01□□□□□ -2.25
VRK1-205ENST00000555402 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
VRK1-205ENST00000555402 DEFB105AQ8NG35 78 aa1.01□□□□□ -2.25
VRK1-205ENST00000555402 KCNQ1DNQ9H478 68 aa1□□□□□ -2.25
VRK1-205ENST00000555402 APLNQ9ULZ1 77 aa1□□□□□ -2.25
VRK1-205ENST00000555402 ZNF462Q96JM2 2506 aa1□□□□□ -2.25
VRK1-205ENST00000555402 SYCP2Q9BX26 1530 aa0.99□□□□□ -2.25
VRK1-205ENST00000555402 CACNA1EQ15878 2313 aa0.99□□□□□ -2.25
VRK1-205ENST00000555402 KIF1AQ12756 1690 aa0.98□□□□□ -2.25
VRK1-205ENST00000555402 ITSN2Q9NZM3 1697 aa0.98□□□□□ -2.25
VRK1-205ENST00000555402 PLCE1Q9P212 2302 aa0.98□□□□□ -2.25
VRK1-205ENST00000555402 ANKRD17O75179 2603 aaKnown RBP0.98□□□□□ -2.25
VRK1-205ENST00000555402 DOPEY2Q9Y3R5 2298 aa0.98□□□□□ -2.25
VRK1-205ENST00000555402 H1FX-AS1Q4G0G2 97 aa0.98□□□□□ -2.25
VRK1-205ENST00000555402 COX6B2Q6YFQ2 88 aa0.98□□□□□ -2.25
VRK1-205ENST00000555402 CACNA1HO95180 2353 aa0.98□□□□□ -2.25
VRK1-205ENST00000555402 ZNF469Q96JG9 3925 aaPredicted RBP0.97□□□□□ -2.25
VRK1-205ENST00000555402 PKD1L2Q7Z442 2459 aa0.97□□□□□ -2.25
VRK1-205ENST00000555402 UGGT1Q9NYU2 1555 aa0.97□□□□□ -2.25
VRK1-205ENST00000555402 MRPL33O75394 65 aaKnown RBP0.97□□□□□ -2.25
VRK1-205ENST00000555402 LELP1Q5T871 98 aa0.97□□□□□ -2.25
VRK1-205ENST00000555402 CPS1P31327 1500 aa0.97□□□□□ -2.25
VRK1-205ENST00000555402 ASH1LQ9NR48 2969 aaKnown RBP0.97□□□□□ -2.25
VRK1-205ENST00000555402 USF3Q68DE3 2245 aa0.97□□□□□ -2.25
VRK1-205ENST00000555402 TTC28Q96AY4 2481 aa0.96□□□□□ -2.26
VRK1-205ENST00000555402 NDUFA3O95167 84 aa0.96□□□□□ -2.26
VRK1-205ENST00000555402 CDKN2A-AS1Q9UH64 79 aa0.96□□□□□ -2.26
VRK1-205ENST00000555402 DEFB131BA0A096LNP1 70 aa0.95□□□□□ -2.26
VRK1-205ENST00000555402 KLK9Q2XQG4 91 aa0.95□□□□□ -2.26
VRK1-205ENST00000555402 DEFB114Q30KQ6 69 aa0.95□□□□□ -2.26
VRK1-205ENST00000555402 ETDCA0A1B0GVM5 59 aa0.94□□□□□ -2.26
VRK1-205ENST00000555402 SRCAPQ6ZRS2 3230 aa0.94□□□□□ -2.26
VRK1-205ENST00000555402 DEFB109BQ30KR1 87 aa0.93□□□□□ -2.26
VRK1-205ENST00000555402 SPINK6Q6UWN8 80 aa0.93□□□□□ -2.26
VRK1-205ENST00000555402 PRO3102Q9H379 93 aa0.93□□□□□ -2.26
VRK1-205ENST00000555402 PTPRQQ9UMZ3 2332 aa0.93□□□□□ -2.26
VRK1-205ENST00000555402 DEPDC5O75140 1603 aa0.93□□□□□ -2.26
VRK1-205ENST00000555402 FCER1GP30273 86 aa0.92□□□□□ -2.26
VRK1-205ENST00000555402 WFDC13Q8IUB5 93 aa0.92□□□□□ -2.26
VRK1-205ENST00000555402 PTPRZ1P23471 2315 aaPredicted RBP0.92□□□□□ -2.26
VRK1-205ENST00000555402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.92□□□□□ -2.26
VRK1-205ENST00000555402 C2CD3Q4AC94 2353 aa0.91□□□□□ -2.26
VRK1-205ENST00000555402 SPINK4O60575 86 aa0.9□□□□□ -2.27
VRK1-205ENST00000555402 LINC00158P58513 81 aa0.9□□□□□ -2.27
VRK1-205ENST00000555402 KIAA0586Q9BVV6 1533 aa0.89□□□□□ -2.27
VRK1-205ENST00000555402 TNCP24821 2201 aa0.89□□□□□ -2.27
VRK1-205ENST00000555402 CLASP1Q7Z460 1538 aa0.89□□□□□ -2.27
VRK1-205ENST00000555402 M0R1W7 72 aa0.88□□□□□ -2.27
VRK1-205ENST00000555402 CEP350Q5VT06 3117 aa0.88□□□□□ -2.27
VRK1-205ENST00000555402 FANCD2Q9BXW9 1451 aa0.87□□□□□ -2.27
VRK1-205ENST00000555402 TENM3Q9P273 2699 aa0.87□□□□□ -2.27
VRK1-205ENST00000555402 MEGF8Q7Z7M0 2845 aa0.87□□□□□ -2.27
VRK1-205ENST00000555402 H0YAA0 97 aa0.87□□□□□ -2.27
VRK1-205ENST00000555402 CRIP1P50238 77 aa0.87□□□□□ -2.27
VRK1-205ENST00000555402 SPTBN2O15020 2390 aa0.87□□□□□ -2.27
VRK1-205ENST00000555402 CNOT1A5YKK6 2376 aaKnown RBP0.86□□□□□ -2.27
VRK1-205ENST00000555402 TRANK1O15050 2925 aa0.86□□□□□ -2.27
VRK1-205ENST00000555402 K7EMI3 77 aa0.86□□□□□ -2.27
VRK1-205ENST00000555402 NCBP2-AS2Q69YL0 99 aa0.86□□□□□ -2.27
VRK1-205ENST00000555402 TOGARAM1Q9Y4F4 1720 aa0.86□□□□□ -2.27
VRK1-205ENST00000555402 PDE4DIPQ5VU43 2346 aa0.86□□□□□ -2.27
VRK1-205ENST00000555402 ADCY10Q96PN6 1610 aa0.86□□□□□ -2.27
VRK1-205ENST00000555402 ANKRD36CQ5JPF3 1778 aa0.85□□□□□ -2.27
VRK1-205ENST00000555402 CHD8Q9HCK8 2581 aa0.85□□□□□ -2.27
VRK1-205ENST00000555402 PRH1P02810 166 aa0.85□□□□□ -2.27
VRK1-205ENST00000555402 KRTAP2-3P0C7H8 128 aa0.85□□□□□ -2.27
VRK1-205ENST00000555402 SERF2P84101 59 aa0.85□□□□□ -2.27
VRK1-205ENST00000555402 KRTAP2-4Q9BYR9 128 aa0.85□□□□□ -2.27
VRK1-205ENST00000555402 KRTAP2-1Q9BYU5 128 aa0.85□□□□□ -2.27
VRK1-205ENST00000555402 NMES1Q9C002 83 aa0.85□□□□□ -2.27
VRK1-205ENST00000555402 SETXQ7Z333 2677 aaKnown RBP0.84□□□□□ -2.27
VRK1-205ENST00000555402 NRXN3Q9Y4C0 1643 aa0.84□□□□□ -2.28
VRK1-205ENST00000555402 PIEZO2Q9H5I5 2752 aa0.83□□□□□ -2.28
VRK1-205ENST00000555402 SPINK1P00995 79 aa0.83□□□□□ -2.28
VRK1-205ENST00000555402 USP9XQ93008 2570 aaPredicted RBP0.83□□□□□ -2.28
VRK1-205ENST00000555402 POLQO75417 2590 aa0.82□□□□□ -2.28
VRK1-205ENST00000555402 TEP1Q99973 2627 aaKnown RBP0.82□□□□□ -2.28
VRK1-205ENST00000555402 CDC42BPAQ5VT25 1732 aa0.82□□□□□ -2.28
VRK1-205ENST00000555402 NAV2Q8IVL1 2488 aa0.82□□□□□ -2.28
VRK1-205ENST00000555402 ANKRD11Q6UB99 2663 aaPredicted RBP0.82□□□□□ -2.28
VRK1-205ENST00000555402 LYNX1G3V0Z9 82 aa0.81□□□□□ -2.28
VRK1-205ENST00000555402 IAPPP10997 89 aa0.81□□□□□ -2.28
VRK1-205ENST00000555402 SMR3AQ99954 134 aa0.81□□□□□ -2.28
VRK1-205ENST00000555402 ABCA12Q86UK0 2595 aa0.81□□□□□ -2.28
VRK1-205ENST00000555402 MAST4O15021 2626 aa0.81□□□□□ -2.28
VRK1-205ENST00000555402 ITPR3Q14573 2671 aa0.81□□□□□ -2.28
VRK1-205ENST00000555402 DOPEY1Q5JWR5 2465 aa0.8□□□□□ -2.28
VRK1-205ENST00000555402 FLNBO75369 2602 aaKnown RBP0.8□□□□□ -2.28
VRK1-205ENST00000555402 FRAS1Q86XX4 4008 aa0.8□□□□□ -2.28
VRK1-205ENST00000555402 ABCA5Q8WWZ7 1642 aa0.8□□□□□ -2.28
VRK1-205ENST00000555402 LOC730098B7Z3J9 87 aa0.8□□□□□ -2.28
VRK1-205ENST00000555402 ABCC8Q09428 1581 aa0.79□□□□□ -2.28
VRK1-205ENST00000555402 MYO9AB2RTY4 2548 aa0.79□□□□□ -2.28
VRK1-205ENST00000555402 HECTD1Q9ULT8 2610 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms