RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 BATFQ16520 125 aa12.66□□□□□ -0.38
FOXN3-209ENST00000555353 C1orf137Q5JT78 98 aa12.66□□□□□ -0.38
FOXN3-209ENST00000555353 LINC00337Q8N6G1 96 aa12.66□□□□□ -0.38
FOXN3-209ENST00000555353 LINC00167Q96N53 147 aa12.66□□□□□ -0.38
FOXN3-209ENST00000555353 KRTAP11-1Q8IUC1 163 aa12.64□□□□□ -0.39
FOXN3-209ENST00000555353 TRBV10-3A0A0K0K1G6 114 aa12.63□□□□□ -0.39
FOXN3-209ENST00000555353 IGLV6-57P01721 117 aa12.63□□□□□ -0.39
FOXN3-209ENST00000555353 PRO1854Q9UHT4 67 aa12.63□□□□□ -0.39
FOXN3-209ENST00000555353 DMBT1Q9UGM3 2413 aaPredicted RBP12.63□□□□□ -0.39
FOXN3-209ENST00000555353 A0A1B0GWB2 263 aa12.62□□□□□ -0.39
FOXN3-209ENST00000555353 RPL37AP8A6NKH3 93 aa12.62□□□□□ -0.39
FOXN3-209ENST00000555353 RPL13AP40429 203 aaKnown RBP12.62□□□□□ -0.39
FOXN3-209ENST00000555353 PKHD1L1Q86WI1 4243 aa12.61□□□□□ -0.39
FOXN3-209ENST00000555353 IGLV1-50A0A075B6I6 118 aa12.61□□□□□ -0.39
FOXN3-209ENST00000555353 KRTAP29-1A8MX34 341 aaPredicted RBP12.61□□□□□ -0.39
FOXN3-209ENST00000555353 J3QL48 77 aa12.61□□□□□ -0.39
FOXN3-209ENST00000555353 SPINK6Q6UWN8 80 aa12.61□□□□□ -0.39
FOXN3-209ENST00000555353 OXTP01178 125 aa12.6□□□□□ -0.39
FOXN3-209ENST00000555353 K7ERJ3 54 aa12.59□□□□□ -0.39
FOXN3-209ENST00000555353 TRAV23DV6A0A075B6W5 121 aa12.58□□□□□ -0.4
FOXN3-209ENST00000555353 PRYO14603 147 aa12.58□□□□□ -0.4
FOXN3-209ENST00000555353 IGLV7-43P04211 117 aa12.58□□□□□ -0.4
FOXN3-209ENST00000555353 Q1RN00 199 aa12.58□□□□□ -0.4
FOXN3-209ENST00000555353 H7C2G1 150 aa12.57□□□□□ -0.4
FOXN3-209ENST00000555353 SNHG12Q9BXW3 62 aa12.57□□□□□ -0.4
FOXN3-209ENST00000555353 KCNQ1DNQ9H478 68 aa12.57□□□□□ -0.4
FOXN3-209ENST00000555353 LRP1Q07954 4544 aaKnown RBP12.55□□□□□ -0.4
FOXN3-209ENST00000555353 REG3GQ6UW15 175 aa12.55□□□□□ -0.4
FOXN3-209ENST00000555353 ZNF73O43830 326 aaPredicted RBP12.53□□□□□ -0.4
FOXN3-209ENST00000555353 SMIM11BQ8TCY0 68 aa12.53□□□□□ -0.4
FOXN3-209ENST00000555353 DIRC1Q969H9 104 aa12.53□□□□□ -0.4
FOXN3-209ENST00000555353 RPL28P46779 137 aaKnown RBP12.51□□□□□ -0.41
FOXN3-209ENST00000555353 COL5A1-AS1Q5SY13 56 aa12.51□□□□□ -0.41
FOXN3-209ENST00000555353 FAT3Q8TDW7 4589 aa12.5□□□□□ -0.41
FOXN3-209ENST00000555353 C6orf99Q4VX62 202 aa12.5□□□□□ -0.41
FOXN3-209ENST00000555353 ETDCA0A1B0GVM5 59 aa12.49□□□□□ -0.41
FOXN3-209ENST00000555353 TSPAN13O95857 204 aa12.49□□□□□ -0.41
FOXN3-209ENST00000555353 SPRR1AP35321 89 aa12.49□□□□□ -0.41
FOXN3-209ENST00000555353 PSMB2P49721 201 aa12.49□□□□□ -0.41
FOXN3-209ENST00000555353 VAMP3Q15836 100 aa12.49□□□□□ -0.41
FOXN3-209ENST00000555353 BCE1O60756 84 aa12.48□□□□□ -0.41
FOXN3-209ENST00000555353 TRBV7-6A0A0J9YX20 115 aa12.46□□□□□ -0.42
FOXN3-209ENST00000555353 H0Y9J4 135 aa12.46□□□□□ -0.42
FOXN3-209ENST00000555353 ZNF861PO60384 105 aa12.46□□□□□ -0.42
FOXN3-209ENST00000555353 COX6CP09669 75 aa12.46□□□□□ -0.42
FOXN3-209ENST00000555353 FAM19A1Q7Z5A9 133 aa12.46□□□□□ -0.42
FOXN3-209ENST00000555353 LINC01600Q96MT4 127 aa12.45□□□□□ -0.42
FOXN3-209ENST00000555353 COX7BP24311 80 aa12.44□□□□□ -0.42
FOXN3-209ENST00000555353 UBE2AP49459 152 aa12.44□□□□□ -0.42
FOXN3-209ENST00000555353 KRTAP4-16G5E9R7 235 aaPredicted RBP12.43□□□□□ -0.42
FOXN3-209ENST00000555353 H0YGX0 51 aa12.42□□□□□ -0.42
FOXN3-209ENST00000555353 TAX1BP3O14907 124 aa12.42□□□□□ -0.42
FOXN3-209ENST00000555353 TRIAP1O43715 76 aa12.42□□□□□ -0.42
FOXN3-209ENST00000555353 B5MCH6 92 aa12.41□□□□□ -0.42
FOXN3-209ENST00000555353 SCGB1C2P0DMR2 95 aa12.41□□□□□ -0.42
FOXN3-209ENST00000555353 ELOF1P60002 83 aaKnown RBP12.41□□□□□ -0.42
FOXN3-209ENST00000555353 Q6ZRX8 168 aa12.41□□□□□ -0.42
FOXN3-209ENST00000555353 C9orf118A6NHY6 69 aa12.4□□□□□ -0.42
FOXN3-209ENST00000555353 MT1HL1P0DM35 61 aa12.4□□□□□ -0.42
FOXN3-209ENST00000555353 HERC1Q15751 4861 aa12.4□□□□□ -0.42
FOXN3-209ENST00000555353 H3BUT2 72 aa12.39□□□□□ -0.43
FOXN3-209ENST00000555353 LYRM7Q5U5X0 104 aa12.39□□□□□ -0.43
FOXN3-209ENST00000555353 PRLHP81277 87 aa12.39□□□□□ -0.43
FOXN3-209ENST00000555353 SNCGO76070 127 aa12.38□□□□□ -0.43
FOXN3-209ENST00000555353 NAA38Q9BRA0 125 aaKnown RBP12.38□□□□□ -0.43
FOXN3-209ENST00000555353 SLC25A20O43772 301 aa12.37□□□□□ -0.43
FOXN3-209ENST00000555353 DHRS4-AS1Q9P1J3 65 aa12.36□□□□□ -0.43
FOXN3-209ENST00000555353 KRTAP13-1Q8IUC0 172 aa12.35□□□□□ -0.43
FOXN3-209ENST00000555353 HIGD2AQ9BW72 106 aa12.34□□□□□ -0.43
FOXN3-209ENST00000555353 LINC00575Q6W349 94 aa12.33□□□□□ -0.44
FOXN3-209ENST00000555353 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
FOXN3-209ENST00000555353 FABP2P12104 132 aa12.32□□□□□ -0.44
FOXN3-209ENST00000555353 KRTAP1-4P0C5Y4 121 aa12.31□□□□□ -0.44
FOXN3-209ENST00000555353 KRTAP10-8P60410 259 aa12.31□□□□□ -0.44
FOXN3-209ENST00000555353 A0A1B0GX51 115 aa12.3□□□□□ -0.44
FOXN3-209ENST00000555353 hADV29S1A0JD25 119 aa12.3□□□□□ -0.44
FOXN3-209ENST00000555353 Q9BRP9 147 aa12.3□□□□□ -0.44
FOXN3-209ENST00000555353 PRR26Q8N8Z3 221 aa12.3□□□□□ -0.44
FOXN3-209ENST00000555353 SMCR5Q8TEV8 140 aa12.3□□□□□ -0.44
FOXN3-209ENST00000555353 CLEC2BQ92478 149 aa12.3□□□□□ -0.44
FOXN3-209ENST00000555353 TRBV20-1A0A075B6N2 111 aa12.28□□□□□ -0.44
FOXN3-209ENST00000555353 TNXBP22105 4242 aa12.27□□□□□ -0.44
FOXN3-209ENST00000555353 ATXN8Q156A1 80 aa12.26□□□□□ -0.45
FOXN3-209ENST00000555353 FAM218AQ96MZ4 157 aa12.26□□□□□ -0.45
FOXN3-209ENST00000555353 DNAL4O96015 105 aa12.26□□□□□ -0.45
FOXN3-209ENST00000555353 LST1O00453 97 aa12.25□□□□□ -0.45
FOXN3-209ENST00000555353 TCL1BO95988 128 aa12.24□□□□□ -0.45
FOXN3-209ENST00000555353 TRACP01848 142 aa12.24□□□□□ -0.45
FOXN3-209ENST00000555353 ZNF706Q9Y5V0 76 aaPredicted RBP12.24□□□□□ -0.45
FOXN3-209ENST00000555353 ERC2-IT1O76042 136 aa12.23□□□□□ -0.45
FOXN3-209ENST00000555353 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.23□□□□□ -0.45
FOXN3-209ENST00000555353 SPCS1Q9Y6A9 102 aa12.23□□□□□ -0.45
FOXN3-209ENST00000555353 GHRHP01286 108 aa12.22□□□□□ -0.45
FOXN3-209ENST00000555353 Q6ZQY7 126 aa12.21□□□□□ -0.46
FOXN3-209ENST00000555353 CRYGAP11844 174 aa12.2□□□□□ -0.46
FOXN3-209ENST00000555353 OCIAD2Q56VL3 154 aa12.19□□□□□ -0.46
FOXN3-209ENST00000555353 ANAPC11Q9NYG5 84 aa12.18□□□□□ -0.46
FOXN3-209ENST00000555353 A0A087X002 238 aa12.17□□□□□ -0.46
FOXN3-209ENST00000555353 GTF2H5Q6ZYL4 71 aa12.17□□□□□ -0.46
FOXN3-209ENST00000555353 ST20-AS1Q8NBB2 130 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms