RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 CHTOPQ9Y3Y2 248 aaKnown RBP4.96□□□□□ -1.62
SCFD1-215ENST00000555259 TRBV10-2A0A0K0K1G8 114 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 C5orf52A6NGY3 159 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 H7C2G1 150 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 MT-ND4LP03901 98 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 SPRR1BP22528 89 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 CD164Q04900 197 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 Q5XG85 94 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 MT1FP04733 61 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 SMCO4Q9NRQ5 59 aa4.95□□□□□ -1.62
SCFD1-215ENST00000555259 A0A096LNJ9 63 aa4.94□□□□□ -1.62
SCFD1-215ENST00000555259 SLC25A34Q6PIV7 304 aa4.94□□□□□ -1.62
SCFD1-215ENST00000555259 BAGE3Q86Y29 109 aa4.94□□□□□ -1.62
SCFD1-215ENST00000555259 TRAV23DV6A0A075B6W5 121 aa4.93□□□□□ -1.62
SCFD1-215ENST00000555259 TMEM223A0PJW6 202 aa4.93□□□□□ -1.62
SCFD1-215ENST00000555259 HERV-K104P63124 156 aa4.93□□□□□ -1.62
SCFD1-215ENST00000555259 LINC00846Q9NV44 126 aa4.93□□□□□ -1.62
SCFD1-215ENST00000555259 LAMTOR3Q9UHA4 124 aa4.93□□□□□ -1.62
SCFD1-215ENST00000555259 LOC107984156A0A0G2JMH3 177 aa4.92□□□□□ -1.62
SCFD1-215ENST00000555259 C20orf202A1L168 122 aa4.92□□□□□ -1.62
SCFD1-215ENST00000555259 LINC00587B1AMM8 73 aa4.92□□□□□ -1.62
SCFD1-215ENST00000555259 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
SCFD1-215ENST00000555259 SMIM29Q86T20 159 aa4.92□□□□□ -1.62
SCFD1-215ENST00000555259 ARL17AQ8IVW1 177 aa4.92□□□□□ -1.62
SCFD1-215ENST00000555259 SPANXB1Q9NS25 103 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-215ENST00000555259 ZNF73O43830 326 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-215ENST00000555259 S100A7L2Q5SY68 101 aa4.91□□□□□ -1.62
SCFD1-215ENST00000555259 MAP1LC3CQ9BXW4 147 aa4.91□□□□□ -1.62
SCFD1-215ENST00000555259 ATP11AUNQ6ZP68 121 aa4.91□□□□□ -1.62
SCFD1-215ENST00000555259 PRO1933Q9H354 126 aa4.91□□□□□ -1.62
SCFD1-215ENST00000555259 KRTAP10-10P60014 251 aa4.9□□□□□ -1.63
SCFD1-215ENST00000555259 HBDP02042 147 aa4.89□□□□□ -1.63
SCFD1-215ENST00000555259 Q1RN00 199 aa4.89□□□□□ -1.63
SCFD1-215ENST00000555259 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
SCFD1-215ENST00000555259 PMCHL1Q16048 86 aa4.88□□□□□ -1.63
SCFD1-215ENST00000555259 URB1-AS1Q96HZ7 61 aa4.88□□□□□ -1.63
SCFD1-215ENST00000555259 MYMXA0A1B0GTQ4 84 aa4.87□□□□□ -1.63
SCFD1-215ENST00000555259 NDUFC2O95298 119 aa4.87□□□□□ -1.63
SCFD1-215ENST00000555259 HINT1P49773 126 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-215ENST00000555259 Q75L30 129 aa4.87□□□□□ -1.63
SCFD1-215ENST00000555259 AKR1D1P51857 326 aa4.87□□□□□ -1.63
SCFD1-215ENST00000555259 MIEN1Q9BRT3 115 aa4.87□□□□□ -1.63
SCFD1-215ENST00000555259 A0A0G2JQZ4 141 aa4.86□□□□□ -1.63
SCFD1-215ENST00000555259 LINC00614P0C842 121 aa4.86□□□□□ -1.63
SCFD1-215ENST00000555259 DHRS4-AS1Q9P1J3 65 aa4.86□□□□□ -1.63
SCFD1-215ENST00000555259 TMA7Q9Y2S6 64 aaKnown RBP4.86□□□□□ -1.63
SCFD1-215ENST00000555259 C10orf91Q5T1B1 145 aa4.85□□□□□ -1.63
SCFD1-215ENST00000555259 TRBV20-1A0A075B6N2 111 aa4.84□□□□□ -1.63
SCFD1-215ENST00000555259 FABP9Q0Z7S8 132 aa4.84□□□□□ -1.63
SCFD1-215ENST00000555259 TAL2Q16559 108 aa4.84□□□□□ -1.63
SCFD1-215ENST00000555259 COMMD7Q86VX2 200 aa4.84□□□□□ -1.63
SCFD1-215ENST00000555259 DEFB105AQ8NG35 78 aa4.84□□□□□ -1.63
SCFD1-215ENST00000555259 OBSCN-AS1Q96MR7 158 aa4.84□□□□□ -1.63
SCFD1-215ENST00000555259 TRAV12-1A0A0B4J245 112 aa4.83□□□□□ -1.64
SCFD1-215ENST00000555259 TCL1BO95988 128 aa4.83□□□□□ -1.64
SCFD1-215ENST00000555259 TSPEAR-AS2P59090 65 aa4.83□□□□□ -1.64
SCFD1-215ENST00000555259 RPS10P5Q9NQ39 176 aa4.83□□□□□ -1.64
SCFD1-215ENST00000555259 hCG_2014768A0A024R1R8 64 aa4.82□□□□□ -1.64
SCFD1-215ENST00000555259 TEX49A0A1B0GTD5 131 aa4.82□□□□□ -1.64
SCFD1-215ENST00000555259 SOSTDC1Q6X4U4 206 aa4.82□□□□□ -1.64
SCFD1-215ENST00000555259 PCP2Q8IVA1 136 aa4.82□□□□□ -1.64
SCFD1-215ENST00000555259 C18orf32Q8TCD1 76 aa4.82□□□□□ -1.64
SCFD1-215ENST00000555259 CBY1Q9Y3M2 126 aa4.82□□□□□ -1.64
SCFD1-215ENST00000555259 IFITM2Q01629 132 aa4.81□□□□□ -1.64
SCFD1-215ENST00000555259 COX19Q49B96 90 aa4.81□□□□□ -1.64
SCFD1-215ENST00000555259 SEC11CQ9BY50 192 aa4.81□□□□□ -1.64
SCFD1-215ENST00000555259 H3BS24 57 aa4.8□□□□□ -1.64
SCFD1-215ENST00000555259 S100PP25815 95 aa4.8□□□□□ -1.64
SCFD1-215ENST00000555259 ELOF1P60002 83 aaKnown RBP4.8□□□□□ -1.64
SCFD1-215ENST00000555259 NPC2P61916 151 aa4.8□□□□□ -1.64
SCFD1-215ENST00000555259 RHEBQ15382 184 aa4.79□□□□□ -1.64
SCFD1-215ENST00000555259 IFI27L1Q96BM0 104 aa4.79□□□□□ -1.64
SCFD1-215ENST00000555259 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
SCFD1-215ENST00000555259 LEPROTO15243 131 aa4.78□□□□□ -1.64
SCFD1-215ENST00000555259 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
SCFD1-215ENST00000555259 ANKRD39Q53RE8 183 aa4.78□□□□□ -1.64
SCFD1-215ENST00000555259 FAM236DA0A1B0GTK5 79 aa4.78□□□□□ -1.64
SCFD1-215ENST00000555259 FAM236CP0DP71 79 aa4.78□□□□□ -1.64
SCFD1-215ENST00000555259 COX7BP24311 80 aa4.78□□□□□ -1.64
SCFD1-215ENST00000555259 OR13C6PQ8NH95 151 aa4.78□□□□□ -1.64
SCFD1-215ENST00000555259 IGLV5-48A0A075B6I7 105 aa4.77□□□□□ -1.65
SCFD1-215ENST00000555259 J3QQQ9 107 aa4.77□□□□□ -1.65
SCFD1-215ENST00000555259 C6orf99Q4VX62 202 aa4.77□□□□□ -1.65
SCFD1-215ENST00000555259 ADAMTSL4-AS1Q5T5F5 129 aa4.77□□□□□ -1.65
SCFD1-215ENST00000555259 LGALS3P17931 250 aaKnown RBP4.76□□□□□ -1.65
SCFD1-215ENST00000555259 NMUP48645 174 aa4.76□□□□□ -1.65
SCFD1-215ENST00000555259 Q96NJ1 140 aa4.76□□□□□ -1.65
SCFD1-215ENST00000555259 C21orf62-AS1Q17RA5 79 aa4.74□□□□□ -1.65
SCFD1-215ENST00000555259 SPANXDQ9BXN6 97 aa4.74□□□□□ -1.65
SCFD1-215ENST00000555259 SPANXCQ9NY87 97 aa4.74□□□□□ -1.65
SCFD1-215ENST00000555259 IGFL1Q6UW32 110 aa4.74□□□□□ -1.65
SCFD1-215ENST00000555259 TRAPPC1Q9Y5R8 145 aa4.74□□□□□ -1.65
SCFD1-215ENST00000555259 A0A0J9YXY3 114 aa4.73□□□□□ -1.65
SCFD1-215ENST00000555259 A8MUU9 505 aa4.73□□□□□ -1.65
SCFD1-215ENST00000555259 H0Y8G0 127 aa4.73□□□□□ -1.65
SCFD1-215ENST00000555259 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
SCFD1-215ENST00000555259 LINC00308Q8TCZ7 52 aa4.71□□□□□ -1.66
SCFD1-215ENST00000555259 CHCHD1Q96BP2 118 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms