RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 LINC00474Q9P2X8 69 aa6.62□□□□□ -1.35
CNOT2-243ENST00000553078 IGLV1-50A0A075B6I6 118 aa6.61□□□□□ -1.35
CNOT2-243ENST00000553078 UBE2BP63146 152 aa6.61□□□□□ -1.35
CNOT2-243ENST00000553078 REG3GQ6UW15 175 aa6.61□□□□□ -1.35
CNOT2-243ENST00000553078 Q6ZRX8 168 aa6.61□□□□□ -1.35
CNOT2-243ENST00000553078 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.6□□□□□ -1.35
CNOT2-243ENST00000553078 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
CNOT2-243ENST00000553078 RPL37AP8A6NKH3 93 aa6.6□□□□□ -1.35
CNOT2-243ENST00000553078 F8WEM9 126 aa6.6□□□□□ -1.35
CNOT2-243ENST00000553078 DNAH3Q8TD57 4116 aa6.6□□□□□ -1.35
CNOT2-243ENST00000553078 ATOX1O00244 68 aa6.59□□□□□ -1.35
CNOT2-243ENST00000553078 IGKV3D-7A0A0C4DH55 119 aa6.58□□□□□ -1.36
CNOT2-243ENST00000553078 FAM168BA1KXE4 195 aa6.58□□□□□ -1.36
CNOT2-243ENST00000553078 B5MCH6 92 aa6.58□□□□□ -1.36
CNOT2-243ENST00000553078 SPRR1AP35321 89 aa6.58□□□□□ -1.36
CNOT2-243ENST00000553078 KRTAP1-5Q9BYS1 174 aa6.58□□□□□ -1.36
CNOT2-243ENST00000553078 COL6A5A8TX70 2615 aa6.58□□□□□ -1.36
CNOT2-243ENST00000553078 A0A096LNI7 61 aa6.57□□□□□ -1.36
CNOT2-243ENST00000553078 TRBV7-4A0A0J9YYF1 115 aa6.57□□□□□ -1.36
CNOT2-243ENST00000553078 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
CNOT2-243ENST00000553078 HIST1H4AP62805 103 aaKnown RBP6.57□□□□□ -1.36
CNOT2-243ENST00000553078 DEFB105AQ8NG35 78 aa6.57□□□□□ -1.36
CNOT2-243ENST00000553078 A0A1B0GW54 56 aa6.55□□□□□ -1.36
CNOT2-243ENST00000553078 FAM19A1Q7Z5A9 133 aa6.55□□□□□ -1.36
CNOT2-243ENST00000553078 ANK2Q01484 3957 aa6.55□□□□□ -1.36
CNOT2-243ENST00000553078 HAMPP81172 84 aa6.54□□□□□ -1.36
CNOT2-243ENST00000553078 C9orf163Q8N9P6 203 aa6.54□□□□□ -1.36
CNOT2-243ENST00000553078 TENM3Q9P273 2699 aa6.54□□□□□ -1.36
CNOT2-243ENST00000553078 CMYA5Q8N3K9 4069 aa6.54□□□□□ -1.36
CNOT2-243ENST00000553078 CXCL6P80162 114 aa6.53□□□□□ -1.36
CNOT2-243ENST00000553078 Q6ZVQ6 151 aa6.53□□□□□ -1.36
CNOT2-243ENST00000553078 DPH3Q96FX2 82 aa6.53□□□□□ -1.36
CNOT2-243ENST00000553078 KRTAP4-16G5E9R7 235 aaPredicted RBP6.52□□□□□ -1.37
CNOT2-243ENST00000553078 UBE2AP49459 152 aa6.52□□□□□ -1.37
CNOT2-243ENST00000553078 NOTCH1P46531 2555 aa6.52□□□□□ -1.37
CNOT2-243ENST00000553078 IGLV5-48A0A075B6I7 105 aa6.51□□□□□ -1.37
CNOT2-243ENST00000553078 NREPQ16612 68 aa6.51□□□□□ -1.37
CNOT2-243ENST00000553078 Q8N377 158 aa6.51□□□□□ -1.37
CNOT2-243ENST00000553078 Q9BRP9 147 aa6.51□□□□□ -1.37
CNOT2-243ENST00000553078 LRCOL1A6NCL2 159 aa6.5□□□□□ -1.37
CNOT2-243ENST00000553078 M0R2N4 97 aa6.5□□□□□ -1.37
CNOT2-243ENST00000553078 UQCRQO14949 82 aa6.5□□□□□ -1.37
CNOT2-243ENST00000553078 C1orf137Q5JT78 98 aa6.5□□□□□ -1.37
CNOT2-243ENST00000553078 LINC01547P58512 204 aaPredicted RBP6.49□□□□□ -1.37
CNOT2-243ENST00000553078 SMIM20Q8N5G0 67 aa6.49□□□□□ -1.37
CNOT2-243ENST00000553078 HIGD2AQ9BW72 106 aa6.49□□□□□ -1.37
CNOT2-243ENST00000553078 PKD1L1Q8TDX9 2849 aa6.49□□□□□ -1.37
CNOT2-243ENST00000553078 MGAM2Q2M2H8 2515 aa6.48□□□□□ -1.37
CNOT2-243ENST00000553078 A0A1W2PNN7 141 aa6.48□□□□□ -1.37
CNOT2-243ENST00000553078 C9orf153Q5TBE3 101 aa6.48□□□□□ -1.37
CNOT2-243ENST00000553078 Q6ZRN7 208 aaPredicted RBP6.48□□□□□ -1.37
CNOT2-243ENST00000553078 A0A087WTM6 91 aa6.47□□□□□ -1.37
CNOT2-243ENST00000553078 H0Y9J4 135 aa6.47□□□□□ -1.37
CNOT2-243ENST00000553078 BCE1O60756 84 aa6.47□□□□□ -1.37
CNOT2-243ENST00000553078 CHTF8P0CG12 524 aa6.47□□□□□ -1.37
CNOT2-243ENST00000553078 COX7CP15954 63 aa6.47□□□□□ -1.37
CNOT2-243ENST00000553078 KRTAP21-3Q3LHN1 58 aa6.47□□□□□ -1.37
CNOT2-243ENST00000553078 C1orf134Q5TEV5 83 aa6.47□□□□□ -1.37
CNOT2-243ENST00000553078 PHF5AQ7RTV0 110 aaKnown RBP6.47□□□□□ -1.37
CNOT2-243ENST00000553078 KRTAP7-1Q8IUC3 87 aa6.47□□□□□ -1.37
CNOT2-243ENST00000553078 C3orf22Q8N5N4 141 aa6.47□□□□□ -1.37
CNOT2-243ENST00000553078 A0A087WVE0 104 aa6.46□□□□□ -1.38
CNOT2-243ENST00000553078 BPY2O14599 106 aa6.46□□□□□ -1.38
CNOT2-243ENST00000553078 PRLHP81277 87 aa6.46□□□□□ -1.38
CNOT2-243ENST00000553078 ST20-AS1Q8NBB2 130 aa6.46□□□□□ -1.38
CNOT2-243ENST00000553078 Q8NBF4 154 aa6.46□□□□□ -1.38
CNOT2-243ENST00000553078 C3orf84H3BNL1 204 aa6.45□□□□□ -1.38
CNOT2-243ENST00000553078 CCDC179H3BU77 68 aa6.45□□□□□ -1.38
CNOT2-243ENST00000553078 RTL8CO15255 209 aa6.45□□□□□ -1.38
CNOT2-243ENST00000553078 LY6G6CO95867 125 aa6.45□□□□□ -1.38
CNOT2-243ENST00000553078 SERP2Q8N6R1 65 aa6.45□□□□□ -1.38
CNOT2-243ENST00000553078 IGLV5-52A0A0A0MRZ9 124 aa6.44□□□□□ -1.38
CNOT2-243ENST00000553078 SPACA4Q8TDM5 124 aa6.44□□□□□ -1.38
CNOT2-243ENST00000553078 ZNF706Q9Y5V0 76 aaPredicted RBP6.44□□□□□ -1.38
CNOT2-243ENST00000553078 ERC2-IT1O76042 136 aa6.43□□□□□ -1.38
CNOT2-243ENST00000553078 TNP2Q05952 138 aa6.43□□□□□ -1.38
CNOT2-243ENST00000553078 WWC2-AS2Q96NR7 200 aa6.43□□□□□ -1.38
CNOT2-243ENST00000553078 NBEAL1Q6ZS30 2694 aa6.43□□□□□ -1.38
CNOT2-243ENST00000553078 EPM2AB3EWF7 344 aa6.42□□□□□ -1.38
CNOT2-243ENST00000553078 Q6ZR54 194 aa6.42□□□□□ -1.38
CNOT2-243ENST00000553078 LINC00476Q8WZB0 136 aa6.42□□□□□ -1.38
CNOT2-243ENST00000553078 HUWE1Q7Z6Z7 4374 aaKnown RBP6.42□□□□□ -1.38
CNOT2-243ENST00000553078 SCXQ7RTU7 201 aa6.4□□□□□ -1.38
CNOT2-243ENST00000553078 SPRR4Q96PI1 79 aa6.4□□□□□ -1.38
CNOT2-243ENST00000553078 IGLV8-61A0A075B6I0 122 aa6.39□□□□□ -1.39
CNOT2-243ENST00000553078 SPRR1BP22528 89 aa6.39□□□□□ -1.39
CNOT2-243ENST00000553078 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
CNOT2-243ENST00000553078 A0A1W2PNM2 257 aa6.38□□□□□ -1.39
CNOT2-243ENST00000553078 CRYGAP11844 174 aa6.38□□□□□ -1.39
CNOT2-243ENST00000553078 IGFL1Q6UW32 110 aa6.37□□□□□ -1.39
CNOT2-243ENST00000553078 SMIM29Q86T20 159 aa6.36□□□□□ -1.39
CNOT2-243ENST00000553078 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
CNOT2-243ENST00000553078 STAB2Q8WWQ8 2551 aa6.35□□□□□ -1.39
CNOT2-243ENST00000553078 PLAC8Q9NZF1 115 aa6.35□□□□□ -1.39
CNOT2-243ENST00000553078 SS18L2Q9UHA2 77 aa6.35□□□□□ -1.39
CNOT2-243ENST00000553078 IGKV4-1P06312 121 aa6.34□□□□□ -1.39
CNOT2-243ENST00000553078 RPL37AP61513 92 aaKnown RBP6.34□□□□□ -1.39
CNOT2-243ENST00000553078 TMEM258P61165 79 aa6.33□□□□□ -1.4
CNOT2-243ENST00000553078 A0A087WSZ3 146 aa6.32□□□□□ -1.4
CNOT2-243ENST00000553078 PANO1I0J062 215 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms