RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 CAMK2N2Q96S95 79 aa8.26□□□□□ -1.09
HDAC7-230ENST00000552960 SMIM26A0A096LP01 95 aa8.25□□□□□ -1.09
HDAC7-230ENST00000552960 C3orf84H3BNL1 204 aa8.25□□□□□ -1.09
HDAC7-230ENST00000552960 PDE6GP18545 87 aa8.25□□□□□ -1.09
HDAC7-230ENST00000552960 A0A0J9YWU9 116 aa8.25□□□□□ -1.09
HDAC7-230ENST00000552960 APOC4P55056 127 aa8.24□□□□□ -1.09
HDAC7-230ENST00000552960 CXCL6P80162 114 aa8.24□□□□□ -1.09
HDAC7-230ENST00000552960 KLKP1Q107X0 134 aa8.24□□□□□ -1.09
HDAC7-230ENST00000552960 BPY2O14599 106 aa8.23□□□□□ -1.09
HDAC7-230ENST00000552960 MIFP14174 115 aa8.23□□□□□ -1.09
HDAC7-230ENST00000552960 NREPQ16612 68 aa8.23□□□□□ -1.09
HDAC7-230ENST00000552960 LELP1Q5T871 98 aa8.23□□□□□ -1.09
HDAC7-230ENST00000552960 COL7A1Q02388 2944 aa8.23□□□□□ -1.09
HDAC7-230ENST00000552960 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
HDAC7-230ENST00000552960 LYSTQ99698 3801 aa8.23□□□□□ -1.09
HDAC7-230ENST00000552960 Q8NAQ8 132 aa8.22□□□□□ -1.09
HDAC7-230ENST00000552960 DNHD1Q96M86 4753 aa8.22□□□□□ -1.09
HDAC7-230ENST00000552960 TRBV7-4A0A0J9YYF1 115 aa8.22□□□□□ -1.09
HDAC7-230ENST00000552960 STAB2Q8WWQ8 2551 aa8.21□□□□□ -1.09
HDAC7-230ENST00000552960 SPART-AS1P0CW21 52 aa8.21□□□□□ -1.1
HDAC7-230ENST00000552960 HUWE1Q7Z6Z7 4374 aaKnown RBP8.21□□□□□ -1.1
HDAC7-230ENST00000552960 ELOF1P60002 83 aaKnown RBP8.2□□□□□ -1.1
HDAC7-230ENST00000552960 Q6ZRU5 148 aa8.2□□□□□ -1.1
HDAC7-230ENST00000552960 TMEM254Q8TBM7 123 aa8.2□□□□□ -1.1
HDAC7-230ENST00000552960 WFDC10BQ8IUB3 73 aa8.19□□□□□ -1.1
HDAC7-230ENST00000552960 FAM229BQ4G0N7 80 aa8.19□□□□□ -1.1
HDAC7-230ENST00000552960 TENM2Q9NT68 2774 aa8.19□□□□□ -1.1
HDAC7-230ENST00000552960 BCE1O60756 84 aa8.18□□□□□ -1.1
HDAC7-230ENST00000552960 VPREB1P12018 145 aa8.18□□□□□ -1.1
HDAC7-230ENST00000552960 PRR34Q9NV39 138 aa8.18□□□□□ -1.1
HDAC7-230ENST00000552960 MDFIQ99750 246 aa8.17□□□□□ -1.1
HDAC7-230ENST00000552960 H3BQ85 93 aa8.16□□□□□ -1.1
HDAC7-230ENST00000552960 M0R378 163 aa8.16□□□□□ -1.1
HDAC7-230ENST00000552960 IGKV2D-24A0A075B6R9 120 aa8.15□□□□□ -1.11
HDAC7-230ENST00000552960 EGFEM1PQ0D2K5 195 aa8.15□□□□□ -1.11
HDAC7-230ENST00000552960 Q6ZTC4 211 aa8.15□□□□□ -1.11
HDAC7-230ENST00000552960 HIGD2AQ9BW72 106 aa8.15□□□□□ -1.11
HDAC7-230ENST00000552960 GVQW2A0A096LPI5 108 aaPredicted RBP8.14□□□□□ -1.11
HDAC7-230ENST00000552960 EPM2AB3EWF7 344 aa8.14□□□□□ -1.11
HDAC7-230ENST00000552960 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
HDAC7-230ENST00000552960 NKAPP1Q8N9T2 125 aa8.14□□□□□ -1.11
HDAC7-230ENST00000552960 FAM30AQ9NZY2 134 aa8.14□□□□□ -1.11
HDAC7-230ENST00000552960 NDUFC1O43677 76 aa8.13□□□□□ -1.11
HDAC7-230ENST00000552960 CSMD3Q7Z407 3707 aa8.13□□□□□ -1.11
HDAC7-230ENST00000552960 RPL37AP8A6NKH3 93 aa8.13□□□□□ -1.11
HDAC7-230ENST00000552960 IGKV4-1P06312 121 aa8.13□□□□□ -1.11
HDAC7-230ENST00000552960 FUSP35637 526 aaKnown RBP eCLIP8.13□□□□□ -1.11
HDAC7-230ENST00000552960 Q6ZRP5 223 aa8.13□□□□□ -1.11
HDAC7-230ENST00000552960 PRR4Q16378 134 aa8.12□□□□□ -1.11
HDAC7-230ENST00000552960 KPRPQ5T749 579 aaPredicted RBP8.12□□□□□ -1.11
HDAC7-230ENST00000552960 C1orf195Q5TG92 126 aa8.12□□□□□ -1.11
HDAC7-230ENST00000552960 PRYO14603 147 aa8.11□□□□□ -1.11
HDAC7-230ENST00000552960 DNAH9Q9NYC9 4486 aa8.1□□□□□ -1.11
HDAC7-230ENST00000552960 C15orf56Q8N910 161 aa8.09□□□□□ -1.11
HDAC7-230ENST00000552960 SMIM29Q86T20 159 aa8.09□□□□□ -1.11
HDAC7-230ENST00000552960 SERTAD4-AS1Q5TG53 156 aa8.08□□□□□ -1.12
HDAC7-230ENST00000552960 Q8N377 158 aa8.08□□□□□ -1.12
HDAC7-230ENST00000552960 K7EIL1 84 aa8.07□□□□□ -1.12
HDAC7-230ENST00000552960 SYCNQ0VAF6 134 aa8.07□□□□□ -1.12
HDAC7-230ENST00000552960 OCR1Q9BZK8 76 aa8.07□□□□□ -1.12
HDAC7-230ENST00000552960 ESRGQ1W209 222 aa8.07□□□□□ -1.12
HDAC7-230ENST00000552960 C11orf45Q8TAV5 145 aa8.07□□□□□ -1.12
HDAC7-230ENST00000552960 PRKDCP78527 4128 aaKnown RBP8.06□□□□□ -1.12
HDAC7-230ENST00000552960 DEFB131BA0A096LNP1 70 aa8.06□□□□□ -1.12
HDAC7-230ENST00000552960 C7orf33Q8WU49 177 aa8.06□□□□□ -1.12
HDAC7-230ENST00000552960 ST20-AS1Q8NBB2 130 aa8.06□□□□□ -1.12
HDAC7-230ENST00000552960 V9GYY9 64 aa8.06□□□□□ -1.12
HDAC7-230ENST00000552960 DNAH7Q8WXX0 4024 aa8.05□□□□□ -1.12
HDAC7-230ENST00000552960 ATP5EP56381 51 aaPredicted RBP8.05□□□□□ -1.12
HDAC7-230ENST00000552960 FAM168BA1KXE4 195 aa8.04□□□□□ -1.12
HDAC7-230ENST00000552960 PSPHP1O15172 72 aa8.04□□□□□ -1.12
HDAC7-230ENST00000552960 ETDCA0A1B0GVM5 59 aa8.04□□□□□ -1.12
HDAC7-230ENST00000552960 MEGF8Q7Z7M0 2845 aa8.03□□□□□ -1.12
HDAC7-230ENST00000552960 C1orf137Q5JT78 98 aa8.03□□□□□ -1.12
HDAC7-230ENST00000552960 A0A0G2JQZ4 141 aa8.03□□□□□ -1.12
HDAC7-230ENST00000552960 A0A1W2PNN7 141 aa8.03□□□□□ -1.12
HDAC7-230ENST00000552960 DNAH10Q8IVF4 4471 aa8.03□□□□□ -1.12
HDAC7-230ENST00000552960 DEFB116Q30KQ4 102 aa8.03□□□□□ -1.12
HDAC7-230ENST00000552960 KRTAP26-1Q6PEX3 210 aa8.03□□□□□ -1.12
HDAC7-230ENST00000552960 A0A1W2PNM2 257 aa8.02□□□□□ -1.13
HDAC7-230ENST00000552960 UBE2BP63146 152 aa8.01□□□□□ -1.13
HDAC7-230ENST00000552960 ERC2-IT1O76042 136 aa8.01□□□□□ -1.13
HDAC7-230ENST00000552960 SEC61GP60059 68 aa8□□□□□ -1.13
HDAC7-230ENST00000552960 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
HDAC7-230ENST00000552960 Q9BRP9 147 aa7.99□□□□□ -1.13
HDAC7-230ENST00000552960 PLECQ15149 4684 aaKnown RBP7.98□□□□□ -1.13
HDAC7-230ENST00000552960 K7EQZ3 153 aa7.98□□□□□ -1.13
HDAC7-230ENST00000552960 Q6ZRX8 168 aa7.98□□□□□ -1.13
HDAC7-230ENST00000552960 IGLV5-48A0A075B6I7 105 aa7.97□□□□□ -1.13
HDAC7-230ENST00000552960 DHRS4-AS1Q9P1J3 65 aa7.97□□□□□ -1.13
HDAC7-230ENST00000552960 DNAH1Q9P2D7 4330 aa7.96□□□□□ -1.13
HDAC7-230ENST00000552960 C1orf64Q8NEQ6 169 aa7.96□□□□□ -1.14
HDAC7-230ENST00000552960 CASC10Q5T4H9 136 aa7.95□□□□□ -1.14
HDAC7-230ENST00000552960 WFDC13Q8IUB5 93 aa7.95□□□□□ -1.14
HDAC7-230ENST00000552960 TGP01266 2768 aa7.95□□□□□ -1.14
HDAC7-230ENST00000552960 F8WDY8 70 aa7.95□□□□□ -1.14
HDAC7-230ENST00000552960 Q8NBF4 154 aa7.95□□□□□ -1.14
HDAC7-230ENST00000552960 SRRM2Q9UQ35 2752 aaKnown RBP7.94□□□□□ -1.14
HDAC7-230ENST00000552960 DSCR10P59022 87 aa7.93□□□□□ -1.14
HDAC7-230ENST00000552960 STARD9Q9P2P6 4700 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms