RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 LINC00167Q96N53 147 aa7.22□□□□□ -1.25
TGFBR1-209ENST00000552516 LINC00575Q6W349 94 aa7.22□□□□□ -1.25
TGFBR1-209ENST00000552516 IL17DQ8TAD2 202 aa7.22□□□□□ -1.25
TGFBR1-209ENST00000552516 MRPL55Q7Z7F7 128 aaKnown RBP7.21□□□□□ -1.25
TGFBR1-209ENST00000552516 TRRAPQ9Y4A5 3859 aa7.21□□□□□ -1.26
TGFBR1-209ENST00000552516 ATOX1O00244 68 aa7.21□□□□□ -1.26
TGFBR1-209ENST00000552516 TENM2Q9NT68 2774 aa7.2□□□□□ -1.26
TGFBR1-209ENST00000552516 KIAA0087Q14695 138 aa7.2□□□□□ -1.26
TGFBR1-209ENST00000552516 C1orf137Q5JT78 98 aa7.2□□□□□ -1.26
TGFBR1-209ENST00000552516 A0A087WSZ3 146 aa7.19□□□□□ -1.26
TGFBR1-209ENST00000552516 REG3GQ6UW15 175 aa7.19□□□□□ -1.26
TGFBR1-209ENST00000552516 CIRBP-AS1Q8TBR5 109 aa7.18□□□□□ -1.26
TGFBR1-209ENST00000552516 MPLKIPQ8TAP9 179 aa7.18□□□□□ -1.26
TGFBR1-209ENST00000552516 IGLV5-52A0A0A0MRZ9 124 aa7.17□□□□□ -1.26
TGFBR1-209ENST00000552516 ANAPC11Q9NYG5 84 aa7.16□□□□□ -1.26
TGFBR1-209ENST00000552516 C14orf177Q52M58 125 aa7.16□□□□□ -1.26
TGFBR1-209ENST00000552516 SMCR5Q8TEV8 140 aa7.16□□□□□ -1.26
TGFBR1-209ENST00000552516 IGKV4-1P06312 121 aa7.15□□□□□ -1.26
TGFBR1-209ENST00000552516 ZNF469Q96JG9 3925 aaPredicted RBP7.15□□□□□ -1.27
TGFBR1-209ENST00000552516 C15orf56Q8N910 161 aa7.15□□□□□ -1.27
TGFBR1-209ENST00000552516 C5orf47Q569G3 176 aa7.14□□□□□ -1.27
TGFBR1-209ENST00000552516 MUC7Q8TAX7 377 aa7.14□□□□□ -1.27
TGFBR1-209ENST00000552516 Q6ZVQ6 151 aa7.14□□□□□ -1.27
TGFBR1-209ENST00000552516 Q9BRP9 147 aa7.14□□□□□ -1.27
TGFBR1-209ENST00000552516 NUPR2A6NF83 97 aa7.13□□□□□ -1.27
TGFBR1-209ENST00000552516 NDUFB1O75438 58 aa7.13□□□□□ -1.27
TGFBR1-209ENST00000552516 Q8NDZ9 215 aa7.13□□□□□ -1.27
TGFBR1-209ENST00000552516 Q6JHZ5 121 aa7.12□□□□□ -1.27
TGFBR1-209ENST00000552516 NDUFC2O95298 119 aa7.12□□□□□ -1.27
TGFBR1-209ENST00000552516 TGP01266 2768 aa7.12□□□□□ -1.27
TGFBR1-209ENST00000552516 RPL37AP61513 92 aaKnown RBP7.12□□□□□ -1.27
TGFBR1-209ENST00000552516 Q6Q795 121 aa7.11□□□□□ -1.27
TGFBR1-209ENST00000552516 DHRS4-AS1Q9P1J3 65 aa7.11□□□□□ -1.27
TGFBR1-209ENST00000552516 C4orf48Q5BLP8 95 aa7.11□□□□□ -1.27
TGFBR1-209ENST00000552516 C1orf134Q5TEV5 83 aa7.11□□□□□ -1.27
TGFBR1-209ENST00000552516 FAM19A3Q7Z5A8 133 aa7.11□□□□□ -1.27
TGFBR1-209ENST00000552516 LINC01547P58512 204 aaPredicted RBP7.11□□□□□ -1.27
TGFBR1-209ENST00000552516 C2orf48Q96LS8 159 aa7.1□□□□□ -1.27
TGFBR1-209ENST00000552516 VPREB1P12018 145 aa7.1□□□□□ -1.27
TGFBR1-209ENST00000552516 UQCRQO14949 82 aa7.09□□□□□ -1.27
TGFBR1-209ENST00000552516 IGHV6-1A0A0B4J1U7 121 aa7.09□□□□□ -1.28
TGFBR1-209ENST00000552516 PDE6GP18545 87 aa7.08□□□□□ -1.28
TGFBR1-209ENST00000552516 LINC00612Q8N6U2 182 aa7.08□□□□□ -1.28
TGFBR1-209ENST00000552516 NBDYA0A0U1RRE5 68 aa7.07□□□□□ -1.28
TGFBR1-209ENST00000552516 PRR34Q9NV39 138 aa7.07□□□□□ -1.28
TGFBR1-209ENST00000552516 ERC2-IT1O76042 136 aa7.06□□□□□ -1.28
TGFBR1-209ENST00000552516 MP68P56378 58 aa7.06□□□□□ -1.28
TGFBR1-209ENST00000552516 SERP2Q8N6R1 65 aa7.06□□□□□ -1.28
TGFBR1-209ENST00000552516 PCOTHQ58A44 107 aa7.05□□□□□ -1.28
TGFBR1-209ENST00000552516 SRRM2Q9UQ35 2752 aaKnown RBP7.05□□□□□ -1.28
TGFBR1-209ENST00000552516 COX7CP15954 63 aa7.05□□□□□ -1.28
TGFBR1-209ENST00000552516 EPM2AB3EWF7 344 aa7.05□□□□□ -1.28
TGFBR1-209ENST00000552516 MOBPQ13875 183 aa7.05□□□□□ -1.28
TGFBR1-209ENST00000552516 ELOF1P60002 83 aaKnown RBP7.04□□□□□ -1.28
TGFBR1-209ENST00000552516 FAM240AA0A1B0GVK7 77 aa7.04□□□□□ -1.28
TGFBR1-209ENST00000552516 SMR3BP02814 79 aaPredicted RBP7.03□□□□□ -1.28
TGFBR1-209ENST00000552516 LINC00208Q96KT6 92 aa7.03□□□□□ -1.28
TGFBR1-209ENST00000552516 RTL8CO15255 209 aa7.02□□□□□ -1.29
TGFBR1-209ENST00000552516 IGLV6-57P01721 117 aa7.02□□□□□ -1.29
TGFBR1-209ENST00000552516 SMIM29Q86T20 159 aa7.02□□□□□ -1.29
TGFBR1-209ENST00000552516 GVQW2A0A096LPI5 108 aaPredicted RBP7.02□□□□□ -1.29
TGFBR1-209ENST00000552516 Q6ZRX8 168 aa7.02□□□□□ -1.29
TGFBR1-209ENST00000552516 LINC00476Q8WZB0 136 aa7.02□□□□□ -1.29
TGFBR1-209ENST00000552516 Q6ZQT0 140 aa7.01□□□□□ -1.29
TGFBR1-209ENST00000552516 DMBT1Q9UGM3 2413 aaPredicted RBP7.01□□□□□ -1.29
TGFBR1-209ENST00000552516 FAM236DA0A1B0GTK5 79 aa7□□□□□ -1.29
TGFBR1-209ENST00000552516 FAM236CP0DP71 79 aa7□□□□□ -1.29
TGFBR1-209ENST00000552516 TM2D3Q9BRN9 247 aa7□□□□□ -1.29
TGFBR1-209ENST00000552516 LINC01561Q8N1V8 128 aa7□□□□□ -1.29
TGFBR1-209ENST00000552516 H3BNG1 76 aa6.99□□□□□ -1.29
TGFBR1-209ENST00000552516 NHLRC4P0CG21 123 aaPredicted RBP6.99□□□□□ -1.29
TGFBR1-209ENST00000552516 KRTAP1-5Q9BYS1 174 aa6.99□□□□□ -1.29
TGFBR1-209ENST00000552516 PRYO14603 147 aa6.99□□□□□ -1.29
TGFBR1-209ENST00000552516 A0A0U1RQV1 116 aa6.98□□□□□ -1.29
TGFBR1-209ENST00000552516 SPACA4Q8TDM5 124 aa6.98□□□□□ -1.29
TGFBR1-209ENST00000552516 J3KT08 172 aa6.98□□□□□ -1.29
TGFBR1-209ENST00000552516 IMUPQ9GZP8 106 aa6.97□□□□□ -1.29
TGFBR1-209ENST00000552516 BRK1Q8WUW1 75 aa6.97□□□□□ -1.29
TGFBR1-209ENST00000552516 H3BQ85 93 aa6.97□□□□□ -1.29
TGFBR1-209ENST00000552516 Q8N377 158 aa6.96□□□□□ -1.29
TGFBR1-209ENST00000552516 ATP5EP2Q5VTU8 51 aa6.96□□□□□ -1.3
TGFBR1-209ENST00000552516 LINC00474Q9P2X8 69 aa6.96□□□□□ -1.3
TGFBR1-209ENST00000552516 C16orf90A8MZG2 172 aa6.96□□□□□ -1.3
TGFBR1-209ENST00000552516 PKIGQ9Y2B9 76 aa6.96□□□□□ -1.3
TGFBR1-209ENST00000552516 LINC00528Q8N1L1 170 aa6.95□□□□□ -1.3
TGFBR1-209ENST00000552516 IGLV1-50A0A075B6I6 118 aa6.95□□□□□ -1.3
TGFBR1-209ENST00000552516 CHKB-CPT1BH3BT56 60 aa6.95□□□□□ -1.3
TGFBR1-209ENST00000552516 CSMD3Q7Z407 3707 aa6.94□□□□□ -1.3
TGFBR1-209ENST00000552516 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
TGFBR1-209ENST00000552516 K7EQZ3 153 aa6.93□□□□□ -1.3
TGFBR1-209ENST00000552516 TRBV7-7A0A0K0K1E9 115 aa6.93□□□□□ -1.3
TGFBR1-209ENST00000552516 APLNQ9ULZ1 77 aa6.92□□□□□ -1.3
TGFBR1-209ENST00000552516 SPINK1P00995 79 aa6.91□□□□□ -1.3
TGFBR1-209ENST00000552516 FLG2Q5D862 2391 aaPredicted RBP6.91□□□□□ -1.3
TGFBR1-209ENST00000552516 TMEM254Q8TBM7 123 aa6.91□□□□□ -1.3
TGFBR1-209ENST00000552516 HCG22E2RYF7 251 aa6.91□□□□□ -1.3
TGFBR1-209ENST00000552516 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
TGFBR1-209ENST00000552516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.9□□□□□ -1.3
TGFBR1-209ENST00000552516 TNP2Q05952 138 aa6.9□□□□□ -1.3
TGFBR1-209ENST00000552516 TRAV7A0A075B6U4 112 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms