RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 RPL13AP40429 203 aaKnown RBP4.01□□□□□ -1.77
GNPTAB-209ENST00000552009 ORMDL2Q53FV1 153 aa4.01□□□□□ -1.77
GNPTAB-209ENST00000552009 MRPL55Q7Z7F7 128 aaKnown RBP4.01□□□□□ -1.77
GNPTAB-209ENST00000552009 Q8IZM0 81 aa4.01□□□□□ -1.77
GNPTAB-209ENST00000552009 LINC00167Q96N53 147 aa4.01□□□□□ -1.77
GNPTAB-209ENST00000552009 F8VRH5 84 aa4□□□□□ -1.77
GNPTAB-209ENST00000552009 SPINK8P0C7L1 97 aa4□□□□□ -1.77
GNPTAB-209ENST00000552009 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
GNPTAB-209ENST00000552009 LBHQ53QV2 105 aaPredicted RBP4□□□□□ -1.77
GNPTAB-209ENST00000552009 FAM19A2Q8N3H0 131 aa4□□□□□ -1.77
GNPTAB-209ENST00000552009 GEMIN7Q9H840 131 aaKnown RBP4□□□□□ -1.77
GNPTAB-209ENST00000552009 FAT4Q6V0I7 4981 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 IGKV2-28A0A075B6P5 120 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 BCE1O60756 84 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 IGKV2D-28P01615 120 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 PRLHP81277 87 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 LINC01545Q5VT33 79 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 LINC01561Q8N1V8 128 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 TYMSOSQ8TAI1 123 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 IFI27L1Q96BM0 104 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 UQCR10Q9UDW1 63 aa3.99□□□□□ -1.77
GNPTAB-209ENST00000552009 A0A096LNJ9 63 aa3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 RPL28P46779 137 aaKnown RBP3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 HERVK_113P63121 156 aa3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 SPATA45Q537H7 98 aa3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 FAM19A3Q7Z5A8 133 aa3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 COX7B2Q8TF08 81 aa3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 TOMM6Q96B49 74 aa3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 SCGB3A1Q96QR1 104 aa3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 PMCHL2Q9BQD1 86 aa3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 MIEN1Q9BRT3 115 aa3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 MUC17Q685J3 4493 aa3.98□□□□□ -1.77
GNPTAB-209ENST00000552009 TRAV12-1A0A0B4J245 112 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 LINC00587B1AMM8 73 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 TMEM238C9JI98 176 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 CRYGAP11844 174 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 PLNP26678 52 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 PFN2P35080 140 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 UBE2AP49459 152 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 Q8N377 158 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 Q8NDZ9 215 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 TIMM17AQ99595 171 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
GNPTAB-209ENST00000552009 IGLC3P0DOY3 106 aa3.96□□□□□ -1.78
GNPTAB-209ENST00000552009 KRTAP13-1Q8IUC0 172 aa3.96□□□□□ -1.78
GNPTAB-209ENST00000552009 NKAPP1Q8N9T2 125 aa3.96□□□□□ -1.78
GNPTAB-209ENST00000552009 ZNF625Q96I27 306 aaPredicted RBP3.96□□□□□ -1.78
GNPTAB-209ENST00000552009 PRO1933Q9H354 126 aa3.96□□□□□ -1.78
GNPTAB-209ENST00000552009 CST9LQ9H4G1 147 aa3.96□□□□□ -1.78
GNPTAB-209ENST00000552009 TP73-AS1Q9UF72 201 aa3.96□□□□□ -1.78
GNPTAB-209ENST00000552009 TINCRA0A1B0GVN0 87 aa3.95□□□□□ -1.78
GNPTAB-209ENST00000552009 DPM2O94777 84 aa3.95□□□□□ -1.78
GNPTAB-209ENST00000552009 SLC25A34Q6PIV7 304 aa3.95□□□□□ -1.78
GNPTAB-209ENST00000552009 ERASQ7Z444 233 aa3.95□□□□□ -1.78
GNPTAB-209ENST00000552009 C3orf22Q8N5N4 141 aa3.95□□□□□ -1.78
GNPTAB-209ENST00000552009 LINC00304Q8N9R0 145 aa3.95□□□□□ -1.78
GNPTAB-209ENST00000552009 M0R143 59 aa3.94□□□□□ -1.78
GNPTAB-209ENST00000552009 CXCL5P42830 114 aa3.94□□□□□ -1.78
GNPTAB-209ENST00000552009 SEC11AP67812 179 aa3.94□□□□□ -1.78
GNPTAB-209ENST00000552009 CTAG1AP78358 180 aa3.94□□□□□ -1.78
GNPTAB-209ENST00000552009 FAM19A1Q7Z5A9 133 aa3.94□□□□□ -1.78
GNPTAB-209ENST00000552009 C14orf144Q96I85 54 aa3.94□□□□□ -1.78
GNPTAB-209ENST00000552009 A0A0U1RRA0 63 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 H0Y8G0 127 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 DLEU1O43261 78 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 IGKCP01834 107 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 COX8AP10176 69 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 VPREB1P12018 145 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 HERVK_113P61574 105 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 PMVKQ15126 192 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 ATOH7Q8N100 152 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 TMEM126AQ9H061 195 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 SND1-IT1Q9HBX3 110 aa3.93□□□□□ -1.78
GNPTAB-209ENST00000552009 IGKV2D-26A0A0A0MRZ7 120 aa3.92□□□□□ -1.78
GNPTAB-209ENST00000552009 A0A0U1RQV1 116 aa3.92□□□□□ -1.78
GNPTAB-209ENST00000552009 M0R378 163 aa3.92□□□□□ -1.78
GNPTAB-209ENST00000552009 ZNF22P17026 224 aaPredicted RBP3.92□□□□□ -1.78
GNPTAB-209ENST00000552009 HIGD2AQ9BW72 106 aa3.92□□□□□ -1.78
GNPTAB-209ENST00000552009 ERG28Q9UKR5 140 aa3.92□□□□□ -1.78
GNPTAB-209ENST00000552009 H3BRM9 83 aa3.91□□□□□ -1.78
GNPTAB-209ENST00000552009 FAM229BQ4G0N7 80 aa3.91□□□□□ -1.78
GNPTAB-209ENST00000552009 COL5A1-AS1Q5SY13 56 aa3.91□□□□□ -1.78
GNPTAB-209ENST00000552009 BOD1L2Q8IYS8 172 aa3.91□□□□□ -1.78
GNPTAB-209ENST00000552009 DAND5Q8N907 189 aa3.91□□□□□ -1.78
GNPTAB-209ENST00000552009 Q8NBF4 154 aa3.91□□□□□ -1.78
GNPTAB-209ENST00000552009 CHTOPQ9Y3Y2 248 aaKnown RBP3.91□□□□□ -1.78
GNPTAB-209ENST00000552009 C11orf86A6NJI1 115 aa3.9□□□□□ -1.79
GNPTAB-209ENST00000552009 HSD52Q0P140 79 aa3.9□□□□□ -1.79
GNPTAB-209ENST00000552009 PLEKHB2Q96CS7 222 aa3.9□□□□□ -1.79
GNPTAB-209ENST00000552009 PPDPFQ9H3Y8 114 aa3.9□□□□□ -1.79
GNPTAB-209ENST00000552009 TPRXLQ17RH7 258 aa3.89□□□□□ -1.79
GNPTAB-209ENST00000552009 TMEM170BQ5T4T1 132 aa3.89□□□□□ -1.79
GNPTAB-209ENST00000552009 SNHG12Q9BXW3 62 aa3.89□□□□□ -1.79
GNPTAB-209ENST00000552009 HIGD1BQ9P298 99 aa3.89□□□□□ -1.79
GNPTAB-209ENST00000552009 A6NDN8 102 aa3.88□□□□□ -1.79
GNPTAB-209ENST00000552009 E9PLD3 99 aa3.88□□□□□ -1.79
GNPTAB-209ENST00000552009 NCR3O14931 201 aa3.88□□□□□ -1.79
GNPTAB-209ENST00000552009 NMUP48645 174 aa3.88□□□□□ -1.79
GNPTAB-209ENST00000552009 LINC00158P58513 81 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms