RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 PHF5AQ7RTV0 110 aaKnown RBP6.53□□□□□ -1.36
NEK3-203ENST00000551355 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
NEK3-203ENST00000551355 DIRC1Q969H9 104 aa6.53□□□□□ -1.36
NEK3-203ENST00000551355 FAM30AQ9NZY2 134 aa6.53□□□□□ -1.36
NEK3-203ENST00000551355 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
NEK3-203ENST00000551355 H0YGX0 51 aa6.52□□□□□ -1.37
NEK3-203ENST00000551355 SNCGO76070 127 aa6.52□□□□□ -1.37
NEK3-203ENST00000551355 REG3GQ6UW15 175 aa6.52□□□□□ -1.37
NEK3-203ENST00000551355 SCXQ7RTU7 201 aa6.52□□□□□ -1.37
NEK3-203ENST00000551355 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
NEK3-203ENST00000551355 H3BUT2 72 aa6.51□□□□□ -1.37
NEK3-203ENST00000551355 SCGB1C2P0DMR2 95 aa6.51□□□□□ -1.37
NEK3-203ENST00000551355 FABP2P12104 132 aa6.51□□□□□ -1.37
NEK3-203ENST00000551355 C6orf99Q4VX62 202 aa6.51□□□□□ -1.37
NEK3-203ENST00000551355 TRIAP1O43715 76 aa6.5□□□□□ -1.37
NEK3-203ENST00000551355 SPRR1AP35321 89 aa6.5□□□□□ -1.37
NEK3-203ENST00000551355 HECTD4Q9Y4D8 3996 aa6.49□□□□□ -1.37
NEK3-203ENST00000551355 TRBV20-1A0A075B6N2 111 aa6.49□□□□□ -1.37
NEK3-203ENST00000551355 ETDCA0A1B0GVM5 59 aa6.49□□□□□ -1.37
NEK3-203ENST00000551355 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
NEK3-203ENST00000551355 DNAH11Q96DT5 4516 aa6.49□□□□□ -1.37
NEK3-203ENST00000551355 PKD1P98161 4303 aa6.49□□□□□ -1.37
NEK3-203ENST00000551355 A0A1B0GX51 115 aa6.48□□□□□ -1.37
NEK3-203ENST00000551355 INAFM2P0DMQ5 153 aa6.48□□□□□ -1.37
NEK3-203ENST00000551355 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
NEK3-203ENST00000551355 COX7BP24311 80 aa6.48□□□□□ -1.37
NEK3-203ENST00000551355 ELOF1P60002 83 aaKnown RBP6.48□□□□□ -1.37
NEK3-203ENST00000551355 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
NEK3-203ENST00000551355 H0Y9J4 135 aa6.47□□□□□ -1.37
NEK3-203ENST00000551355 SLC25A20O43772 301 aa6.47□□□□□ -1.37
NEK3-203ENST00000551355 BCE1O60756 84 aa6.47□□□□□ -1.37
NEK3-203ENST00000551355 CDK2AP2O75956 126 aa6.46□□□□□ -1.38
NEK3-203ENST00000551355 ATXN8Q156A1 80 aa6.46□□□□□ -1.38
NEK3-203ENST00000551355 Q6ZRX8 168 aa6.46□□□□□ -1.38
NEK3-203ENST00000551355 NAA38Q9BRA0 125 aaKnown RBP6.46□□□□□ -1.38
NEK3-203ENST00000551355 DHRS4-AS1Q9P1J3 65 aa6.46□□□□□ -1.38
NEK3-203ENST00000551355 B5MCH6 92 aa6.45□□□□□ -1.38
NEK3-203ENST00000551355 XGP55808 180 aa6.45□□□□□ -1.38
NEK3-203ENST00000551355 LINC00575Q6W349 94 aa6.45□□□□□ -1.38
NEK3-203ENST00000551355 GTF2H5Q6ZYL4 71 aa6.45□□□□□ -1.38
NEK3-203ENST00000551355 FAM19A1Q7Z5A9 133 aa6.45□□□□□ -1.38
NEK3-203ENST00000551355 PSORS1C2Q9UIG4 136 aa6.45□□□□□ -1.38
NEK3-203ENST00000551355 UBE2AP49459 152 aa6.44□□□□□ -1.38
NEK3-203ENST00000551355 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
NEK3-203ENST00000551355 SPCS1Q9Y6A9 102 aa6.44□□□□□ -1.38
NEK3-203ENST00000551355 RYR3Q15413 4870 aa6.44□□□□□ -1.38
NEK3-203ENST00000551355 hADV29S1A0JD25 119 aa6.43□□□□□ -1.38
NEK3-203ENST00000551355 LST1O00453 97 aa6.43□□□□□ -1.38
NEK3-203ENST00000551355 TRACP01848 142 aa6.43□□□□□ -1.38
NEK3-203ENST00000551355 C1orf137Q5JT78 98 aa6.43□□□□□ -1.38
NEK3-203ENST00000551355 DNAH5Q8TE73 4624 aa6.42□□□□□ -1.38
NEK3-203ENST00000551355 H3BQ85 93 aa6.42□□□□□ -1.38
NEK3-203ENST00000551355 TCL1BO95988 128 aa6.42□□□□□ -1.38
NEK3-203ENST00000551355 DNAL4O96015 105 aa6.42□□□□□ -1.38
NEK3-203ENST00000551355 CLEC2BQ92478 149 aa6.42□□□□□ -1.38
NEK3-203ENST00000551355 K7EP34 96 aa6.41□□□□□ -1.38
NEK3-203ENST00000551355 ZNF861PO60384 105 aa6.41□□□□□ -1.38
NEK3-203ENST00000551355 HAMPP81172 84 aa6.41□□□□□ -1.38
NEK3-203ENST00000551355 OCIAD2Q56VL3 154 aa6.41□□□□□ -1.38
NEK3-203ENST00000551355 IGLV7-43P04211 117 aa6.4□□□□□ -1.38
NEK3-203ENST00000551355 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.4□□□□□ -1.38
NEK3-203ENST00000551355 KRTAP13-1Q8IUC0 172 aa6.4□□□□□ -1.38
NEK3-203ENST00000551355 FAM218AQ96MZ4 157 aa6.4□□□□□ -1.38
NEK3-203ENST00000551355 PKHD1P08F94 4074 aa6.39□□□□□ -1.39
NEK3-203ENST00000551355 RPL37AP61513 92 aaKnown RBP6.39□□□□□ -1.39
NEK3-203ENST00000551355 PRLHP81277 87 aa6.39□□□□□ -1.39
NEK3-203ENST00000551355 Q9BRP9 147 aa6.39□□□□□ -1.39
NEK3-203ENST00000551355 A0A1B0GV90 55 aa6.38□□□□□ -1.39
NEK3-203ENST00000551355 H3BMG7 143 aa6.38□□□□□ -1.39
NEK3-203ENST00000551355 FAM229AH3BQW9 127 aa6.38□□□□□ -1.39
NEK3-203ENST00000551355 SMCR5Q8TEV8 140 aa6.38□□□□□ -1.39
NEK3-203ENST00000551355 PPDPFLQ8WWR9 84 aa6.38□□□□□ -1.39
NEK3-203ENST00000551355 HIGD2AQ9BW72 106 aa6.38□□□□□ -1.39
NEK3-203ENST00000551355 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
NEK3-203ENST00000551355 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
NEK3-203ENST00000551355 ORMDL1Q9P0S3 153 aa6.37□□□□□ -1.39
NEK3-203ENST00000551355 ZNF706Q9Y5V0 76 aaPredicted RBP6.37□□□□□ -1.39
NEK3-203ENST00000551355 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
NEK3-203ENST00000551355 TMEM256-PLSCR3K7ERE1 68 aa6.36□□□□□ -1.39
NEK3-203ENST00000551355 UBE2V1Q13404 147 aa6.36□□□□□ -1.39
NEK3-203ENST00000551355 Q6ZQY7 126 aa6.36□□□□□ -1.39
NEK3-203ENST00000551355 DYNC1H1Q14204 4646 aaKnown RBP6.35□□□□□ -1.39
NEK3-203ENST00000551355 C9JAW5 83 aa6.35□□□□□ -1.39
NEK3-203ENST00000551355 F8W1H4 67 aa6.35□□□□□ -1.39
NEK3-203ENST00000551355 SMR3BP02814 79 aaPredicted RBP6.35□□□□□ -1.39
NEK3-203ENST00000551355 IGLV5-48A0A075B6I7 105 aa6.34□□□□□ -1.39
NEK3-203ENST00000551355 H3BT86 120 aa6.34□□□□□ -1.39
NEK3-203ENST00000551355 BAALC-AS2P0C853 105 aa6.34□□□□□ -1.39
NEK3-203ENST00000551355 SPINK6Q6UWN8 80 aa6.34□□□□□ -1.39
NEK3-203ENST00000551355 TEX49A0A1B0GTD5 131 aa6.33□□□□□ -1.4
NEK3-203ENST00000551355 ERC2-IT1O76042 136 aa6.33□□□□□ -1.4
NEK3-203ENST00000551355 ANKRD29Q8N6D5 301 aa6.32□□□□□ -1.4
NEK3-203ENST00000551355 LINC01600Q96MT4 127 aa6.32□□□□□ -1.4
NEK3-203ENST00000551355 SPRR1BP22528 89 aa6.31□□□□□ -1.4
NEK3-203ENST00000551355 ST20-AS1Q8NBB2 130 aa6.3□□□□□ -1.4
NEK3-203ENST00000551355 DEFB105AQ8NG35 78 aa6.3□□□□□ -1.4
NEK3-203ENST00000551355 SPRR4Q96PI1 79 aa6.3□□□□□ -1.4
NEK3-203ENST00000551355 PRO0461Q9UI25 63 aa6.3□□□□□ -1.4
NEK3-203ENST00000551355 LINC01547P58512 204 aaPredicted RBP6.29□□□□□ -1.4
NEK3-203ENST00000551355 LINC00483Q53H64 154 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms