RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
CPSF6-206ENST00000550987 DYNLRB2Q8TF09 96 aa2.69□□□□□ -1.98
CPSF6-206ENST00000550987 WFDC10AQ9H1F0 79 aa2.69□□□□□ -1.98
CPSF6-206ENST00000550987 IBA57-AS1B1ANH7 110 aa2.68□□□□□ -1.98
CPSF6-206ENST00000550987 FXYD1O00168 92 aa2.68□□□□□ -1.98
CPSF6-206ENST00000550987 CFDP00746 253 aaPredicted RBP2.68□□□□□ -1.98
CPSF6-206ENST00000550987 Q8N814 137 aa2.68□□□□□ -1.98
CPSF6-206ENST00000550987 OR10AG1Q8NH19 301 aa2.68□□□□□ -1.98
CPSF6-206ENST00000550987 MRPL35Q9NZE8 188 aaKnown RBP2.68□□□□□ -1.98
CPSF6-206ENST00000550987 APLNQ9ULZ1 77 aa2.68□□□□□ -1.98
CPSF6-206ENST00000550987 HHLA3Q9XRX5 114 aa2.68□□□□□ -1.98
CPSF6-206ENST00000550987 SPCS1Q9Y6A9 102 aa2.68□□□□□ -1.98
CPSF6-206ENST00000550987 KANTRA0A1W2PQU2 76 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 HMSDA8MTL9 139 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 IGLV3-1P01715 115 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 BAALC-AS2P0C853 105 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 IGLC2P0DOY2 106 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 IGLC3P0DOY3 106 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 FAUP35544 74 aaKnown RBP2.67□□□□□ -1.98
CPSF6-206ENST00000550987 ZNF345Q14585 488 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 Q1T7F1 81 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 RPL7L1Q6DKI1 246 aaKnown RBP2.67□□□□□ -1.98
CPSF6-206ENST00000550987 CASC2Q6XLA1 102 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 TMEM141Q96I45 108 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 TRGV9Q99603 122 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
CPSF6-206ENST00000550987 A0A1W2PPM0 123 aa2.66□□□□□ -1.98
CPSF6-206ENST00000550987 SDHAF1A6NFY7 115 aa2.66□□□□□ -1.98
CPSF6-206ENST00000550987 CCKP06307 115 aa2.66□□□□□ -1.98
CPSF6-206ENST00000550987 ADCYAP1P18509 176 aa2.66□□□□□ -1.98
CPSF6-206ENST00000550987 HINT1P49773 126 aaPredicted RBP2.66□□□□□ -1.98
CPSF6-206ENST00000550987 ROMO1P60602 79 aa2.66□□□□□ -1.98
CPSF6-206ENST00000550987 INSL4Q14641 139 aa2.66□□□□□ -1.98
CPSF6-206ENST00000550987 ARPINQ7Z6K5 226 aa2.66□□□□□ -1.98
CPSF6-206ENST00000550987 SERP2Q8N6R1 65 aa2.66□□□□□ -1.98
CPSF6-206ENST00000550987 C20orf78Q9BR46 151 aa2.66□□□□□ -1.98
CPSF6-206ENST00000550987 MUC17Q685J3 4493 aa2.66□□□□□ -1.98
CPSF6-206ENST00000550987 hADV29S1A0JD25 119 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 CRPP02741 224 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 SMIM11AP58511 58 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 RHOHQ15669 191 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 PMCHL1Q16048 86 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 DEFB135Q30KP9 77 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 DEFB114Q30KQ6 69 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 Q6ZQT0 140 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 Q8IYB0 196 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 FAM213BQ8TBF2 198 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 FAM103A1Q9BTL3 118 aaKnown RBP2.65□□□□□ -1.99
CPSF6-206ENST00000550987 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 CMC2Q9NRP2 79 aa2.65□□□□□ -1.99
CPSF6-206ENST00000550987 A0A087WSZ3 146 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 IGKV2D-26A0A0A0MRZ7 120 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 TRAV3A0A0B4J244 114 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 TRAV1-1A0A0B4J248 108 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 LOC107984156A0A0G2JMH3 177 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 C11orf86A6NJI1 115 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 KRTAP10-8P60410 259 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 BVES-AS1Q5T3Y7 98 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 ARL17AQ8IVW1 177 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 LINC00269Q8N2A0 174 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 TMEM254Q8TBM7 123 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 C20orf166-AS1Q96NR2 134 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 CYP4F30PQ9H0H9 118 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 NDUFB11Q9NX14 153 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 NDUFA12Q9UI09 145 aa2.64□□□□□ -1.99
CPSF6-206ENST00000550987 IGHV3-64A0A075B6Q5 118 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 E7EUB6 86 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 DEFB4AO15263 64 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 NUPR1O60356 82 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 BCE1O60756 84 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 NDUFA3O95167 84 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 MGST1P10620 155 aaKnown RBP2.63□□□□□ -1.99
CPSF6-206ENST00000550987 ZNF137PP52743 207 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 UBE2G1P62253 170 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 RBM3P98179 157 aaKnown RBP2.63□□□□□ -1.99
CPSF6-206ENST00000550987 C2orf82Q6UX34 121 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 TTTY10Q9BZA0 68 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 R4GMQ9 66 aa2.63□□□□□ -1.99
CPSF6-206ENST00000550987 A0A087WWC5 75 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 A0A087WXM4 84 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 A0A0G2JND7 137 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 TRBV10-3A0A0K0K1G6 114 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 CRYM-AS1A6NIL9 109 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 C2orf70A6NJV1 201 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 SYS1-DBNDD2H3BUS1 97 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 ACYP1P07311 99 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 MIFP14174 115 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 PLGLAQ15195 96 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 MPV17LQ2QL34 196 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 ETDBQ3ZM63 59 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 FAM19A2Q8N3H0 131 aa2.62□□□□□ -1.99
CPSF6-206ENST00000550987 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
CPSF6-206ENST00000550987 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
CPSF6-206ENST00000550987 FXYD3Q14802 87 aa2.61□□□□□ -1.99
CPSF6-206ENST00000550987 SPATA45Q537H7 98 aa2.61□□□□□ -1.99
CPSF6-206ENST00000550987 USMG5Q96IX5 58 aa2.61□□□□□ -1.99
CPSF6-206ENST00000550987 TRBV7-1A0A0A6YYK4 115 aa2.6□□□□□ -1.99
CPSF6-206ENST00000550987 TRAV13-2A0A0B4J235 113 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms