RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.93□□□□□ -1.78
DEPDC4-209ENST00000550587 IGKV2-28A0A075B6P5 120 aa3.93□□□□□ -1.78
DEPDC4-209ENST00000550587 TRAV13-2A0A0B4J235 113 aa3.93□□□□□ -1.78
DEPDC4-209ENST00000550587 IGKV2D-28P01615 120 aa3.93□□□□□ -1.78
DEPDC4-209ENST00000550587 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
DEPDC4-209ENST00000550587 HAMPP81172 84 aa3.93□□□□□ -1.78
DEPDC4-209ENST00000550587 GAGE2EQ4V326 116 aa3.93□□□□□ -1.78
DEPDC4-209ENST00000550587 XAGE1AQ9HD64 81 aa3.93□□□□□ -1.78
DEPDC4-209ENST00000550587 GAGE2DQ9UEU5 116 aa3.93□□□□□ -1.78
DEPDC4-209ENST00000550587 TRBV10-2A0A0K0K1G8 114 aa3.92□□□□□ -1.78
DEPDC4-209ENST00000550587 K7ERJ3 54 aa3.92□□□□□ -1.78
DEPDC4-209ENST00000550587 RPL18AQ02543 176 aaKnown RBP3.92□□□□□ -1.78
DEPDC4-209ENST00000550587 GAGE2BQ13066 116 aa3.92□□□□□ -1.78
DEPDC4-209ENST00000550587 C9orf129Q5T035 196 aaKnown RBP3.92□□□□□ -1.78
DEPDC4-209ENST00000550587 SDIM1Q6ZPB5 146 aa3.92□□□□□ -1.78
DEPDC4-209ENST00000550587 LINC00337Q8N6G1 96 aa3.92□□□□□ -1.78
DEPDC4-209ENST00000550587 OXTP01178 125 aa3.91□□□□□ -1.78
DEPDC4-209ENST00000550587 VPREB1P12018 145 aa3.91□□□□□ -1.78
DEPDC4-209ENST00000550587 PRR3P79522 188 aaKnown RBP3.91□□□□□ -1.78
DEPDC4-209ENST00000550587 Q8NDZ9 215 aa3.91□□□□□ -1.78
DEPDC4-209ENST00000550587 TMEM126AQ9H061 195 aa3.91□□□□□ -1.78
DEPDC4-209ENST00000550587 LINC00474Q9P2X8 69 aa3.91□□□□□ -1.78
DEPDC4-209ENST00000550587 A0A096LNI7 61 aa3.9□□□□□ -1.79
DEPDC4-209ENST00000550587 H3BUT2 72 aa3.9□□□□□ -1.79
DEPDC4-209ENST00000550587 M0R378 163 aa3.9□□□□□ -1.79
DEPDC4-209ENST00000550587 TRIAP1O43715 76 aa3.9□□□□□ -1.79
DEPDC4-209ENST00000550587 TSPAN13O95857 204 aa3.9□□□□□ -1.79
DEPDC4-209ENST00000550587 RPL13AP40429 203 aaKnown RBP3.9□□□□□ -1.79
DEPDC4-209ENST00000550587 OR13C6PQ8NH95 151 aa3.9□□□□□ -1.79
DEPDC4-209ENST00000550587 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
DEPDC4-209ENST00000550587 FLG2Q5D862 2391 aaPredicted RBP3.89□□□□□ -1.79
DEPDC4-209ENST00000550587 SRRM2Q9UQ35 2752 aaKnown RBP3.89□□□□□ -1.79
DEPDC4-209ENST00000550587 IGLV5-37A0A075B6J1 123 aa3.89□□□□□ -1.79
DEPDC4-209ENST00000550587 A0A1W2PPM0 123 aa3.89□□□□□ -1.79
DEPDC4-209ENST00000550587 H7C2G1 150 aa3.89□□□□□ -1.79
DEPDC4-209ENST00000550587 IGLV6-57P01721 117 aa3.89□□□□□ -1.79
DEPDC4-209ENST00000550587 RPL28P46779 137 aaKnown RBP3.89□□□□□ -1.79
DEPDC4-209ENST00000550587 Q1RN00 199 aa3.89□□□□□ -1.79
DEPDC4-209ENST00000550587 S100A7L2Q5SY68 101 aa3.89□□□□□ -1.79
DEPDC4-209ENST00000550587 Q6ZSA8 131 aa3.89□□□□□ -1.79
DEPDC4-209ENST00000550587 IGKV2-24A0A0C4DH68 120 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 A0A1B0GV90 55 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 FAM168BA1KXE4 195 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 NCR3O14931 201 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 COX6CP09669 75 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 SCGB1C2P0DMR2 95 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 FABP2P12104 132 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 PSMB2P49721 201 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 LINC01620Q4KN68 170 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 SCXQ7RTU7 201 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 KRTAP7-1Q8IUC3 87 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 NKAPP1Q8N9T2 125 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 SMIM11BQ8TCY0 68 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 NAA38Q9BRA0 125 aaKnown RBP3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 CBY1Q9Y3M2 126 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 C22orf24Q9Y442 160 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 LRP1BQ9NZR2 4599 aa3.88□□□□□ -1.79
DEPDC4-209ENST00000550587 TRBV10-3A0A0K0K1G6 114 aa3.87□□□□□ -1.79
DEPDC4-209ENST00000550587 A0A1W2PNN7 141 aa3.87□□□□□ -1.79
DEPDC4-209ENST00000550587 LYRM7Q5U5X0 104 aa3.87□□□□□ -1.79
DEPDC4-209ENST00000550587 DPH3Q96FX2 82 aa3.87□□□□□ -1.79
DEPDC4-209ENST00000550587 IGLV1-50A0A075B6I6 118 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 TRBV20-1A0A075B6N2 111 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 TRBV7-6A0A0J9YX20 115 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 GAGE10A6NGK3 116 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 H0YGX0 51 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 CHTF8P0CG12 524 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 RPL37AP61513 92 aaKnown RBP3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 VAMP3Q15836 100 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 FAM19A5Q7Z5A7 132 aaPredicted RBP3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 MRPL55Q7Z7F7 128 aaKnown RBP3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 CIRBP-AS1Q8TBR5 109 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 SPACA4Q8TDM5 124 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 C7orf33Q8WU49 177 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 LINC00167Q96N53 147 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 KCNQ1DNQ9H478 68 aa3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 APOBP04114 4563 aaKnown RBP3.86□□□□□ -1.79
DEPDC4-209ENST00000550587 PANO1I0J062 215 aa3.85□□□□□ -1.79
DEPDC4-209ENST00000550587 GTF2H5Q6ZYL4 71 aa3.85□□□□□ -1.79
DEPDC4-209ENST00000550587 SPCS1Q9Y6A9 102 aa3.85□□□□□ -1.79
DEPDC4-209ENST00000550587 DNAH5Q8TE73 4624 aa3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 TRAV23DV6A0A075B6W5 121 aa3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 A0A087WYN8 130 aa3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 RPL37AP8A6NKH3 93 aa3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 K7EP34 96 aa3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 M0QXV9 152 aa3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 ZNF73O43830 326 aaPredicted RBP3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 TCL1BO95988 128 aa3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 UBE2V1Q13404 147 aa3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 C6orf99Q4VX62 202 aa3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 PLAC8Q9NZF1 115 aa3.84□□□□□ -1.79
DEPDC4-209ENST00000550587 LST1O00453 97 aa3.83□□□□□ -1.8
DEPDC4-209ENST00000550587 PRYO14603 147 aa3.83□□□□□ -1.8
DEPDC4-209ENST00000550587 SNCGO76070 127 aa3.83□□□□□ -1.8
DEPDC4-209ENST00000550587 ATXN8Q156A1 80 aa3.83□□□□□ -1.8
DEPDC4-209ENST00000550587 DIRC1Q969H9 104 aa3.83□□□□□ -1.8
DEPDC4-209ENST00000550587 DNAH8Q96JB1 4490 aa3.82□□□□□ -1.8
DEPDC4-209ENST00000550587 A0A1B0GX51 115 aa3.82□□□□□ -1.8
DEPDC4-209ENST00000550587 KRTAP4-16G5E9R7 235 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms