RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 HINT1P49773 126 aaPredicted RBP7.46□□□□□ -1.22
TROAP-211ENST00000549891 HERVK_113P61574 105 aa7.46□□□□□ -1.22
TROAP-211ENST00000549891 SVBPQ8N300 66 aa7.46□□□□□ -1.22
TROAP-211ENST00000549891 LIMD2Q9BT23 127 aa7.46□□□□□ -1.22
TROAP-211ENST00000549891 ZNF73O43830 326 aaPredicted RBP7.45□□□□□ -1.22
TROAP-211ENST00000549891 LGALS3P17931 250 aaKnown RBP7.45□□□□□ -1.22
TROAP-211ENST00000549891 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
TROAP-211ENST00000549891 SLC25A34Q6PIV7 304 aa7.45□□□□□ -1.22
TROAP-211ENST00000549891 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
TROAP-211ENST00000549891 LEPROTL1O95214 131 aa7.43□□□□□ -1.22
TROAP-211ENST00000549891 ST20-AS1Q8NBB2 130 aa7.43□□□□□ -1.22
TROAP-211ENST00000549891 IGLV8-61A0A075B6I0 122 aa7.42□□□□□ -1.22
TROAP-211ENST00000549891 DPM2O94777 84 aa7.41□□□□□ -1.22
TROAP-211ENST00000549891 PCOTHQ58A44 107 aa7.41□□□□□ -1.22
TROAP-211ENST00000549891 MT1HP80294 61 aa7.4□□□□□ -1.22
TROAP-211ENST00000549891 YPEL4Q96NS1 127 aa7.4□□□□□ -1.22
TROAP-211ENST00000549891 HSPB8Q9UJY1 196 aa7.4□□□□□ -1.22
TROAP-211ENST00000549891 IGKCP01834 107 aa7.39□□□□□ -1.23
TROAP-211ENST00000549891 SPRR1BP22528 89 aa7.39□□□□□ -1.23
TROAP-211ENST00000549891 NPC2P61916 151 aa7.39□□□□□ -1.23
TROAP-211ENST00000549891 KRTAP19-2Q3LHN2 52 aa7.39□□□□□ -1.23
TROAP-211ENST00000549891 HRCT1Q6UXD1 115 aa7.39□□□□□ -1.23
TROAP-211ENST00000549891 DHRS4-AS1Q9P1J3 65 aa7.39□□□□□ -1.23
TROAP-211ENST00000549891 LAMTOR3Q9UHA4 124 aa7.39□□□□□ -1.23
TROAP-211ENST00000549891 C9orf92A6NGG3 77 aa7.38□□□□□ -1.23
TROAP-211ENST00000549891 SOSTDC1Q6X4U4 206 aa7.38□□□□□ -1.23
TROAP-211ENST00000549891 A0A0J9YXY3 114 aa7.37□□□□□ -1.23
TROAP-211ENST00000549891 SERF1AO75920 110 aa7.36□□□□□ -1.23
TROAP-211ENST00000549891 ADAMTSL4-AS1Q5T5F5 129 aa7.36□□□□□ -1.23
TROAP-211ENST00000549891 OR13C6PQ8NH95 151 aa7.36□□□□□ -1.23
TROAP-211ENST00000549891 PMCHL2Q9BQD1 86 aa7.36□□□□□ -1.23
TROAP-211ENST00000549891 SPANXCQ9NY87 97 aa7.36□□□□□ -1.23
TROAP-211ENST00000549891 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
TROAP-211ENST00000549891 FABP4P15090 132 aa7.35□□□□□ -1.23
TROAP-211ENST00000549891 CD164Q04900 197 aa7.35□□□□□ -1.23
TROAP-211ENST00000549891 TRGC2P03986 189 aa7.34□□□□□ -1.23
TROAP-211ENST00000549891 E9PLD3 99 aa7.33□□□□□ -1.24
TROAP-211ENST00000549891 PRO1933Q9H354 126 aa7.33□□□□□ -1.24
TROAP-211ENST00000549891 LINC00310P59036 64 aa7.32□□□□□ -1.24
TROAP-211ENST00000549891 TAL2Q16559 108 aa7.32□□□□□ -1.24
TROAP-211ENST00000549891 LINC00308Q8TCZ7 52 aa7.32□□□□□ -1.24
TROAP-211ENST00000549891 SPANXDQ9BXN6 97 aa7.32□□□□□ -1.24
TROAP-211ENST00000549891 H7C2G1 150 aa7.31□□□□□ -1.24
TROAP-211ENST00000549891 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
TROAP-211ENST00000549891 COX7BP24311 80 aa7.31□□□□□ -1.24
TROAP-211ENST00000549891 ELOF1P60002 83 aaKnown RBP7.31□□□□□ -1.24
TROAP-211ENST00000549891 M0R2T5 61 aa7.3□□□□□ -1.24
TROAP-211ENST00000549891 TIMM17BO60830 172 aa7.3□□□□□ -1.24
TROAP-211ENST00000549891 KRTAP10-6P60371 365 aaPredicted RBP7.3□□□□□ -1.24
TROAP-211ENST00000549891 Q1RN00 199 aa7.3□□□□□ -1.24
TROAP-211ENST00000549891 Q5XG85 94 aa7.3□□□□□ -1.24
TROAP-211ENST00000549891 LINC00518Q8N0U6 118 aa7.3□□□□□ -1.24
TROAP-211ENST00000549891 TEX49A0A1B0GTD5 131 aa7.29□□□□□ -1.24
TROAP-211ENST00000549891 AKR1D1P51857 326 aa7.29□□□□□ -1.24
TROAP-211ENST00000549891 DEFB105AQ8NG35 78 aa7.29□□□□□ -1.24
TROAP-211ENST00000549891 C6orf99Q4VX62 202 aa7.28□□□□□ -1.24
TROAP-211ENST00000549891 LITAFQ99732 161 aa7.28□□□□□ -1.24
TROAP-211ENST00000549891 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
TROAP-211ENST00000549891 TRBV7-6A0A0J9YX20 115 aa7.26□□□□□ -1.25
TROAP-211ENST00000549891 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
TROAP-211ENST00000549891 C1orf195Q5TG92 126 aa7.26□□□□□ -1.25
TROAP-211ENST00000549891 ZNF815PA8K554 130 aa7.24□□□□□ -1.25
TROAP-211ENST00000549891 A0A1B0GWB2 263 aa7.23□□□□□ -1.25
TROAP-211ENST00000549891 SYS1-DBNDD2H3BUS1 97 aa7.23□□□□□ -1.25
TROAP-211ENST00000549891 SMIM29Q86T20 159 aa7.22□□□□□ -1.25
TROAP-211ENST00000549891 COPS9Q8WXC6 57 aa7.22□□□□□ -1.25
TROAP-211ENST00000549891 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
TROAP-211ENST00000549891 IGLV5-48A0A075B6I7 105 aa7.21□□□□□ -1.26
TROAP-211ENST00000549891 TCL1BO95988 128 aa7.21□□□□□ -1.26
TROAP-211ENST00000549891 A4D1N5 150 aa7.2□□□□□ -1.26
TROAP-211ENST00000549891 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
TROAP-211ENST00000549891 LINC01545Q5VT33 79 aa7.19□□□□□ -1.26
TROAP-211ENST00000549891 NHP2Q9NX24 153 aaKnown RBP7.19□□□□□ -1.26
TROAP-211ENST00000549891 PET117Q6UWS5 81 aa7.18□□□□□ -1.26
TROAP-211ENST00000549891 SCGB1D4Q6XE38 83 aa7.18□□□□□ -1.26
TROAP-211ENST00000549891 A0A0G2JQZ4 141 aa7.17□□□□□ -1.26
TROAP-211ENST00000549891 A6NDN8 102 aa7.17□□□□□ -1.26
TROAP-211ENST00000549891 IFITM1P13164 125 aa7.17□□□□□ -1.26
TROAP-211ENST00000549891 TTTY13Q9BZ97 58 aa7.17□□□□□ -1.26
TROAP-211ENST00000549891 COLCA2A8K830 154 aa7.16□□□□□ -1.26
TROAP-211ENST00000549891 F8WEM9 126 aa7.15□□□□□ -1.26
TROAP-211ENST00000549891 Q6ZVH6 145 aa7.15□□□□□ -1.26
TROAP-211ENST00000549891 TRAV13-2A0A0B4J235 113 aa7.12□□□□□ -1.27
TROAP-211ENST00000549891 ATP11AUNQ6ZP68 121 aa7.12□□□□□ -1.27
TROAP-211ENST00000549891 HIST1H2BKO60814 126 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 HIST1H2BJP06899 126 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 HIST1H2BOP23527 126 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 HIST1H2BBP33778 126 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 HIST1H2BDP58876 126 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 HIST1H2BCP62807 126 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 HIST2H2BEQ16778 126 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.11□□□□□ -1.27
TROAP-211ENST00000549891 Q6Q795 121 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 PCP2Q8IVA1 136 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 HIST1H2BHQ93079 126 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 HIST1H2BNQ99877 126 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 HIST1H2BMQ99879 126 aa7.11□□□□□ -1.27
TROAP-211ENST00000549891 C3orf79P0CE67 100 aa7.1□□□□□ -1.27
TROAP-211ENST00000549891 Q6JHZ5 121 aa7.1□□□□□ -1.27
TROAP-211ENST00000549891 MUSTN1Q8IVN3 82 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms