RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 HIST1H2BOP23527 126 aa11.08□□□□□ -0.64
SLC48A1-207ENST00000549243 HIST1H2BBP33778 126 aa11.08□□□□□ -0.64
SLC48A1-207ENST00000549243 HIST1H2BDP58876 126 aa11.08□□□□□ -0.64
SLC48A1-207ENST00000549243 HIST1H2BCP62807 126 aa11.08□□□□□ -0.64
SLC48A1-207ENST00000549243 HIST2H2BEQ16778 126 aa11.08□□□□□ -0.64
SLC48A1-207ENST00000549243 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.08□□□□□ -0.64
SLC48A1-207ENST00000549243 FP248Q71RG6 208 aaPredicted RBP11.08□□□□□ -0.64
SLC48A1-207ENST00000549243 HIST1H2BHQ93079 126 aa11.08□□□□□ -0.64
SLC48A1-207ENST00000549243 HIST1H2BNQ99877 126 aa11.08□□□□□ -0.64
SLC48A1-207ENST00000549243 HIST1H2BMQ99879 126 aa11.08□□□□□ -0.64
SLC48A1-207ENST00000549243 ZNF73O43830 326 aaPredicted RBP11.05□□□□□ -0.64
SLC48A1-207ENST00000549243 JOSD1Q15040 202 aaPredicted RBP11.05□□□□□ -0.64
SLC48A1-207ENST00000549243 SSBP3-AS1Q7Z2R9 100 aa11.03□□□□□ -0.64
SLC48A1-207ENST00000549243 LITAFQ99732 161 aa11.03□□□□□ -0.64
SLC48A1-207ENST00000549243 KRTAP13-3Q3SY46 172 aa11.02□□□□□ -0.65
SLC48A1-207ENST00000549243 C9orf153Q5TBE3 101 aa11.02□□□□□ -0.65
SLC48A1-207ENST00000549243 LINC01545Q5VT33 79 aa11.02□□□□□ -0.65
SLC48A1-207ENST00000549243 ST20-AS1Q8NBB2 130 aa11.02□□□□□ -0.65
SLC48A1-207ENST00000549243 OR13C6PQ8NH95 151 aa11.02□□□□□ -0.65
SLC48A1-207ENST00000549243 LINC00308Q8TCZ7 52 aa11.02□□□□□ -0.65
SLC48A1-207ENST00000549243 FAT4Q6V0I7 4981 aa11.02□□□□□ -0.65
SLC48A1-207ENST00000549243 TTTY13Q9BZ97 58 aa11.01□□□□□ -0.65
SLC48A1-207ENST00000549243 ZNF815PA8K554 130 aa11□□□□□ -0.65
SLC48A1-207ENST00000549243 PET117Q6UWS5 81 aa11□□□□□ -0.65
SLC48A1-207ENST00000549243 SPANXCQ9NY87 97 aa11□□□□□ -0.65
SLC48A1-207ENST00000549243 HINT1P49773 126 aaPredicted RBP10.99□□□□□ -0.65
SLC48A1-207ENST00000549243 Q8N377 158 aa10.99□□□□□ -0.65
SLC48A1-207ENST00000549243 TIMM17BO60830 172 aa10.98□□□□□ -0.65
SLC48A1-207ENST00000549243 C3orf79P0CE67 100 aa10.97□□□□□ -0.65
SLC48A1-207ENST00000549243 RPS29P62273 56 aaKnown RBP10.97□□□□□ -0.65
SLC48A1-207ENST00000549243 LCE2AQ5TA79 106 aaPredicted RBP10.97□□□□□ -0.65
SLC48A1-207ENST00000549243 CBY1Q9Y3M2 126 aa10.97□□□□□ -0.65
SLC48A1-207ENST00000549243 SLC25A20O43772 301 aa10.94□□□□□ -0.66
SLC48A1-207ENST00000549243 KRTDAPP60985 99 aa10.94□□□□□ -0.66
SLC48A1-207ENST00000549243 SPANXDQ9BXN6 97 aa10.93□□□□□ -0.66
SLC48A1-207ENST00000549243 C5orf52A6NGY3 159 aa10.9□□□□□ -0.66
SLC48A1-207ENST00000549243 ASB16-AS1Q495Z4 193 aa10.9□□□□□ -0.66
SLC48A1-207ENST00000549243 DHRS4-AS1Q9P1J3 65 aa10.9□□□□□ -0.66
SLC48A1-207ENST00000549243 C6orf99Q4VX62 202 aa10.89□□□□□ -0.67
SLC48A1-207ENST00000549243 SCGB1D4Q6XE38 83 aa10.89□□□□□ -0.67
SLC48A1-207ENST00000549243 COX7BP24311 80 aa10.88□□□□□ -0.67
SLC48A1-207ENST00000549243 COA6Q5JTJ3 125 aaKnown RBP10.88□□□□□ -0.67
SLC48A1-207ENST00000549243 HRCT1Q6UXD1 115 aa10.88□□□□□ -0.67
SLC48A1-207ENST00000549243 LINC00518Q8N0U6 118 aa10.88□□□□□ -0.67
SLC48A1-207ENST00000549243 SPRR1BP22528 89 aa10.87□□□□□ -0.67
SLC48A1-207ENST00000549243 ELOF1P60002 83 aaKnown RBP10.87□□□□□ -0.67
SLC48A1-207ENST00000549243 ANKRD39Q53RE8 183 aa10.87□□□□□ -0.67
SLC48A1-207ENST00000549243 ATOH7Q8N100 152 aa10.87□□□□□ -0.67
SLC48A1-207ENST00000549243 C20orf202A1L168 122 aa10.85□□□□□ -0.67
SLC48A1-207ENST00000549243 SEC61BP60468 96 aaKnown RBP10.85□□□□□ -0.67
SLC48A1-207ENST00000549243 SLC25A34Q6PIV7 304 aa10.85□□□□□ -0.67
SLC48A1-207ENST00000549243 DEFB105AQ8NG35 78 aa10.85□□□□□ -0.67
SLC48A1-207ENST00000549243 LAMTOR3Q9UHA4 124 aa10.85□□□□□ -0.67
SLC48A1-207ENST00000549243 KRTAP9-2Q9BYQ4 174 aa10.84□□□□□ -0.67
SLC48A1-207ENST00000549243 KRTAP4-1Q9BYQ7 146 aa10.84□□□□□ -0.67
SLC48A1-207ENST00000549243 TAL2Q16559 108 aa10.83□□□□□ -0.68
SLC48A1-207ENST00000549243 Q1RN00 199 aa10.83□□□□□ -0.68
SLC48A1-207ENST00000549243 A6NDN8 102 aa10.81□□□□□ -0.68
SLC48A1-207ENST00000549243 XP32Q5T750 250 aa10.81□□□□□ -0.68
SLC48A1-207ENST00000549243 PCP2Q8IVA1 136 aa10.81□□□□□ -0.68
SLC48A1-207ENST00000549243 LIMD2Q9BT23 127 aa10.8□□□□□ -0.68
SLC48A1-207ENST00000549243 IFITM1P13164 125 aa10.79□□□□□ -0.68
SLC48A1-207ENST00000549243 MUSTN1Q8IVN3 82 aa10.79□□□□□ -0.68
SLC48A1-207ENST00000549243 COPS9Q8WXC6 57 aa10.79□□□□□ -0.68
SLC48A1-207ENST00000549243 TRBV7-6A0A0J9YX20 115 aa10.77□□□□□ -0.69
SLC48A1-207ENST00000549243 TEX49A0A1B0GTD5 131 aa10.77□□□□□ -0.69
SLC48A1-207ENST00000549243 A0A1B0GWB2 263 aa10.76□□□□□ -0.69
SLC48A1-207ENST00000549243 Q6ZVH6 145 aa10.75□□□□□ -0.69
SLC48A1-207ENST00000549243 H7C2G1 150 aa10.74□□□□□ -0.69
SLC48A1-207ENST00000549243 PRO1933Q9H354 126 aa10.74□□□□□ -0.69
SLC48A1-207ENST00000549243 C9orf92A6NGG3 77 aa10.73□□□□□ -0.69
SLC48A1-207ENST00000549243 LINC01547P58512 204 aaPredicted RBP10.72□□□□□ -0.69
SLC48A1-207ENST00000549243 SMIM29Q86T20 159 aa10.72□□□□□ -0.69
SLC48A1-207ENST00000549243 A0A0G2JQZ4 141 aa10.71□□□□□ -0.69
SLC48A1-207ENST00000549243 AKR1D1P51857 326 aa10.71□□□□□ -0.69
SLC48A1-207ENST00000549243 CD164Q04900 197 aa10.7□□□□□ -0.7
SLC48A1-207ENST00000549243 SMIM11BQ8TCY0 68 aa10.7□□□□□ -0.7
SLC48A1-207ENST00000549243 IGLV5-48A0A075B6I7 105 aa10.69□□□□□ -0.7
SLC48A1-207ENST00000549243 TRAV13-2A0A0B4J235 113 aa10.69□□□□□ -0.7
SLC48A1-207ENST00000549243 A4D1N5 150 aa10.67□□□□□ -0.7
SLC48A1-207ENST00000549243 SNRPEP62304 92 aaKnown RBP10.67□□□□□ -0.7
SLC48A1-207ENST00000549243 HIST3H2BBQ8N257 126 aa10.66□□□□□ -0.7
SLC48A1-207ENST00000549243 PCOTHQ58A44 107 aa10.65□□□□□ -0.7
SLC48A1-207ENST00000549243 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
SLC48A1-207ENST00000549243 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
SLC48A1-207ENST00000549243 S100A2P29034 98 aa10.64□□□□□ -0.71
SLC48A1-207ENST00000549243 C1orf195Q5TG92 126 aa10.62□□□□□ -0.71
SLC48A1-207ENST00000549243 HSBP1L1C9JCN9 74 aa10.61□□□□□ -0.71
SLC48A1-207ENST00000549243 Q5XG85 94 aa10.61□□□□□ -0.71
SLC48A1-207ENST00000549243 IGLV8-61A0A075B6I0 122 aa10.6□□□□□ -0.71
SLC48A1-207ENST00000549243 VAMP3Q15836 100 aa10.59□□□□□ -0.71
SLC48A1-207ENST00000549243 LINC00575Q6W349 94 aa10.57□□□□□ -0.72
SLC48A1-207ENST00000549243 F8WEM9 126 aa10.56□□□□□ -0.72
SLC48A1-207ENST00000549243 LCE2CQ5TA81 110 aa10.56□□□□□ -0.72
SLC48A1-207ENST00000549243 S100A6P06703 90 aa10.55□□□□□ -0.72
SLC48A1-207ENST00000549243 Q6ZQY7 126 aa10.55□□□□□ -0.72
SLC48A1-207ENST00000549243 C12orf57Q99622 126 aa10.54□□□□□ -0.72
SLC48A1-207ENST00000549243 hADV29S1A0JD25 119 aa10.53□□□□□ -0.72
SLC48A1-207ENST00000549243 TCL1BO95988 128 aa10.52□□□□□ -0.73
SLC48A1-207ENST00000549243 KRTAP19-2Q3LHN2 52 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms