RNA–Protein interactions for RNA: ENST00000548878.6

ARPC3-208, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 5

Gene ARPC3, Length 532 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-208ENST00000548878 ZDBF2Q9HCK1 2354 aa0.89□□□□□ -2.27
ARPC3-208ENST00000548878 IQGAP1P46940 1657 aa0.89□□□□□ -2.27
ARPC3-208ENST00000548878 DUOX1Q9NRD9 1551 aa0.89□□□□□ -2.27
ARPC3-208ENST00000548878 LINC01549A6NIU2 74 aa0.89□□□□□ -2.27
ARPC3-208ENST00000548878 CADP27708 2225 aa0.89□□□□□ -2.27
ARPC3-208ENST00000548878 TSC2P49815 1807 aa0.89□□□□□ -2.27
ARPC3-208ENST00000548878 AHCTF1Q8WYP5 2266 aa0.89□□□□□ -2.27
ARPC3-208ENST00000548878 COL14A1Q05707 1796 aaKnown RBP0.88□□□□□ -2.27
ARPC3-208ENST00000548878 ANKRD36CQ5JPF3 1778 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 SMIM27A0A1W2PRY6 76 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 I3L2K1 104 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 I3L3M4 83 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 K7EMI3 77 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 CCL22O00626 93 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 MRPL33O75394 65 aaKnown RBP0.88□□□□□ -2.27
ARPC3-208ENST00000548878 PRH1P02810 166 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 PLNP26678 52 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 DEFB114Q30KQ6 69 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 NCBP2-AS2Q69YL0 99 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 COX6B2Q6YFQ2 88 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 LY75O60449 1722 aa0.88□□□□□ -2.27
ARPC3-208ENST00000548878 PARP4Q9UKK3 1724 aaKnown RBP0.87□□□□□ -2.27
ARPC3-208ENST00000548878 ASXL3Q9C0F0 2248 aa0.87□□□□□ -2.27
ARPC3-208ENST00000548878 NDUFA4O00483 81 aa0.87□□□□□ -2.27
ARPC3-208ENST00000548878 FAM103A1Q9BTL3 118 aaKnown RBP0.87□□□□□ -2.27
ARPC3-208ENST00000548878 RICTORQ6R327 1708 aa0.86□□□□□ -2.27
ARPC3-208ENST00000548878 ZNF831Q5JPB2 1677 aa0.86□□□□□ -2.27
ARPC3-208ENST00000548878 ENHOQ6UWT2 76 aa0.86□□□□□ -2.27
ARPC3-208ENST00000548878 Q8IZM0 81 aa0.86□□□□□ -2.27
ARPC3-208ENST00000548878 PRO0255Q9UI72 69 aa0.86□□□□□ -2.27
ARPC3-208ENST00000548878 COL6A6A6NMZ7 2263 aa0.86□□□□□ -2.27
ARPC3-208ENST00000548878 GOLGA4Q13439 2230 aaKnown RBP0.85□□□□□ -2.27
ARPC3-208ENST00000548878 A0A0D9SG42 100 aa0.85□□□□□ -2.27
ARPC3-208ENST00000548878 K7EQZ3 153 aa0.85□□□□□ -2.27
ARPC3-208ENST00000548878 COX6B1P14854 86 aa0.85□□□□□ -2.27
ARPC3-208ENST00000548878 DDX60Q8IY21 1712 aaKnown RBP0.85□□□□□ -2.27
ARPC3-208ENST00000548878 KCNQ1DNQ9H478 68 aa0.85□□□□□ -2.27
ARPC3-208ENST00000548878 DEPDC5O75140 1603 aa0.85□□□□□ -2.27
ARPC3-208ENST00000548878 FAM208BQ5VWN6 2430 aa0.85□□□□□ -2.27
ARPC3-208ENST00000548878 LMO7Q8WWI1 1683 aa0.84□□□□□ -2.27
ARPC3-208ENST00000548878 DDX60LQ5H9U9 1706 aaKnown RBP0.84□□□□□ -2.27
ARPC3-208ENST00000548878 DOT1LQ8TEK3 1739 aa0.84□□□□□ -2.27
ARPC3-208ENST00000548878 TOGARAM1Q9Y4F4 1720 aa0.84□□□□□ -2.27
ARPC3-208ENST00000548878 ANKRD17O75179 2603 aaKnown RBP0.84□□□□□ -2.27
ARPC3-208ENST00000548878 DEFB131BA0A096LNP1 70 aa0.84□□□□□ -2.27
ARPC3-208ENST00000548878 IGIPA6NJ69 53 aa0.84□□□□□ -2.27
ARPC3-208ENST00000548878 Q5VSD8 79 aa0.84□□□□□ -2.27
ARPC3-208ENST00000548878 JMJD1CQ15652 2540 aa0.84□□□□□ -2.28
ARPC3-208ENST00000548878 H0YGX0 51 aa0.83□□□□□ -2.28
ARPC3-208ENST00000548878 FCER1GP30273 86 aa0.83□□□□□ -2.28
ARPC3-208ENST00000548878 MRPL34Q9BQ48 92 aaKnown RBP0.83□□□□□ -2.28
ARPC3-208ENST00000548878 TMEM167BQ9NRX6 74 aa0.83□□□□□ -2.28
ARPC3-208ENST00000548878 URB1O60287 2271 aaKnown RBP0.83□□□□□ -2.28
ARPC3-208ENST00000548878 ETDCA0A1B0GVM5 59 aa0.82□□□□□ -2.28
ARPC3-208ENST00000548878 ASH1LQ9NR48 2969 aaKnown RBP0.82□□□□□ -2.28
ARPC3-208ENST00000548878 ROS1P08922 2347 aa0.82□□□□□ -2.28
ARPC3-208ENST00000548878 C4BP0C0L5 1744 aa0.81□□□□□ -2.28
ARPC3-208ENST00000548878 NRAPQ86VF7 1730 aa0.81□□□□□ -2.28
ARPC3-208ENST00000548878 C4AP0C0L4 1744 aa0.81□□□□□ -2.28
ARPC3-208ENST00000548878 CDKN2A-AS1Q9UH64 79 aa0.8□□□□□ -2.28
ARPC3-208ENST00000548878 TNCP24821 2201 aa0.79□□□□□ -2.28
ARPC3-208ENST00000548878 PRB3Q04118 309 aaPredicted RBP0.79□□□□□ -2.28
ARPC3-208ENST00000548878 TNRC6CQ9HCJ0 1690 aaKnown RBP0.78□□□□□ -2.28
ARPC3-208ENST00000548878 SPINK4O60575 86 aa0.78□□□□□ -2.28
ARPC3-208ENST00000548878 SMIM2Q9BVW6 85 aa0.78□□□□□ -2.28
ARPC3-208ENST00000548878 M0R1W7 72 aa0.77□□□□□ -2.29
ARPC3-208ENST00000548878 SPRR1AP35321 89 aa0.77□□□□□ -2.29
ARPC3-208ENST00000548878 PRO3102Q9H379 93 aa0.77□□□□□ -2.29
ARPC3-208ENST00000548878 CACNA1EQ15878 2313 aa0.77□□□□□ -2.29
ARPC3-208ENST00000548878 PDE4DIPQ5VU43 2346 aa0.76□□□□□ -2.29
ARPC3-208ENST00000548878 LYNX1G3V0Z9 82 aa0.76□□□□□ -2.29
ARPC3-208ENST00000548878 NDUFA1O15239 70 aa0.75□□□□□ -2.29
ARPC3-208ENST00000548878 NDUFA3O95167 84 aa0.75□□□□□ -2.29
ARPC3-208ENST00000548878 DEFB105AQ8NG35 78 aa0.75□□□□□ -2.29
ARPC3-208ENST00000548878 TPRP12270 2363 aaKnown RBP0.75□□□□□ -2.29
ARPC3-208ENST00000548878 DOPEY2Q9Y3R5 2298 aa0.75□□□□□ -2.29
ARPC3-208ENST00000548878 BPTFQ12830 3046 aa0.74□□□□□ -2.29
ARPC3-208ENST00000548878 SPRR1BP22528 89 aa0.74□□□□□ -2.29
ARPC3-208ENST00000548878 LINC01590Q5TEZ4 76 aa0.74□□□□□ -2.29
ARPC3-208ENST00000548878 LINC00308Q8TCZ7 52 aa0.74□□□□□ -2.29
ARPC3-208ENST00000548878 CRIP1P50238 77 aa0.73□□□□□ -2.29
ARPC3-208ENST00000548878 LINC00158P58513 81 aa0.73□□□□□ -2.29
ARPC3-208ENST00000548878 APLNQ9ULZ1 77 aa0.73□□□□□ -2.29
ARPC3-208ENST00000548878 PTPRZ1P23471 2315 aaPredicted RBP0.73□□□□□ -2.29
ARPC3-208ENST00000548878 CNOT1A5YKK6 2376 aaKnown RBP0.72□□□□□ -2.29
ARPC3-208ENST00000548878 NOTCH1P46531 2555 aa0.72□□□□□ -2.29
ARPC3-208ENST00000548878 IGLV5-48A0A075B6I7 105 aa0.72□□□□□ -2.29
ARPC3-208ENST00000548878 POLR2KP53803 58 aaKnown RBP0.72□□□□□ -2.29
ARPC3-208ENST00000548878 H1FX-AS1Q4G0G2 97 aa0.72□□□□□ -2.29
ARPC3-208ENST00000548878 ARHGAP5-AS1Q96IT6 56 aa0.72□□□□□ -2.29
ARPC3-208ENST00000548878 PLCE1Q9P212 2302 aa0.72□□□□□ -2.29
ARPC3-208ENST00000548878 PTPRQQ9UMZ3 2332 aa0.72□□□□□ -2.29
ARPC3-208ENST00000548878 TFF3Q07654 80 aa0.71□□□□□ -2.3
ARPC3-208ENST00000548878 WFDC13Q8IUB5 93 aa0.71□□□□□ -2.3
ARPC3-208ENST00000548878 PIEZO2Q9H5I5 2752 aa0.71□□□□□ -2.3
ARPC3-208ENST00000548878 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.71□□□□□ -2.34e-7■■■□□ 17.2
ARPC3-208ENST00000548878 C2CD3Q4AC94 2353 aa0.7□□□□□ -2.3
ARPC3-208ENST00000548878 SPINK6Q6UWN8 80 aa0.7□□□□□ -2.3
ARPC3-208ENST00000548878 USF3Q68DE3 2245 aa0.7□□□□□ -2.3
ARPC3-208ENST00000548878 SPTBN2O15020 2390 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms