RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 TIMM17BO60830 172 aa7.03□□□□□ -1.28
YBX3-217ENST00000546164 CRYGAP11844 174 aa7.03□□□□□ -1.28
YBX3-217ENST00000546164 AKR1D1P51857 326 aa7.03□□□□□ -1.28
YBX3-217ENST00000546164 FAM229BQ4G0N7 80 aa7.03□□□□□ -1.28
YBX3-217ENST00000546164 SOSTDC1Q6X4U4 206 aa7.03□□□□□ -1.28
YBX3-217ENST00000546164 LITAFQ99732 161 aa7.03□□□□□ -1.28
YBX3-217ENST00000546164 ZNF815PA8K554 130 aa7.01□□□□□ -1.29
YBX3-217ENST00000546164 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
YBX3-217ENST00000546164 DDTP30046 118 aa7.01□□□□□ -1.29
YBX3-217ENST00000546164 S100A12P80511 92 aa7.01□□□□□ -1.29
YBX3-217ENST00000546164 HIST3H2BBQ8N257 126 aa7.01□□□□□ -1.29
YBX3-217ENST00000546164 IGLV6-57P01721 117 aa7□□□□□ -1.29
YBX3-217ENST00000546164 HIGD2AQ9BW72 106 aa7□□□□□ -1.29
YBX3-217ENST00000546164 ANKRD39Q53RE8 183 aa6.99□□□□□ -1.29
YBX3-217ENST00000546164 LINC00308Q8TCZ7 52 aa6.99□□□□□ -1.29
YBX3-217ENST00000546164 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
YBX3-217ENST00000546164 TTTY13Q9BZ97 58 aa6.99□□□□□ -1.29
YBX3-217ENST00000546164 ANAPC11Q9NYG5 84 aa6.99□□□□□ -1.29
YBX3-217ENST00000546164 ETDCA0A1B0GVM5 59 aa6.98□□□□□ -1.29
YBX3-217ENST00000546164 NPC2P61916 151 aa6.98□□□□□ -1.29
YBX3-217ENST00000546164 SNRPEP62304 92 aaKnown RBP6.98□□□□□ -1.29
YBX3-217ENST00000546164 KRTAP13-2Q52LG2 175 aa6.98□□□□□ -1.29
YBX3-217ENST00000546164 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
YBX3-217ENST00000546164 SPANXCQ9NY87 97 aa6.98□□□□□ -1.29
YBX3-217ENST00000546164 B5MCH6 92 aa6.97□□□□□ -1.29
YBX3-217ENST00000546164 S100A2P29034 98 aa6.97□□□□□ -1.29
YBX3-217ENST00000546164 S100A7L2Q5SY68 101 aa6.97□□□□□ -1.29
YBX3-217ENST00000546164 SPRR4Q96PI1 79 aa6.97□□□□□ -1.29
YBX3-217ENST00000546164 ZNF706Q9Y5V0 76 aaPredicted RBP6.97□□□□□ -1.29
YBX3-217ENST00000546164 S100A6P06703 90 aa6.96□□□□□ -1.3
YBX3-217ENST00000546164 ATOH7Q8N100 152 aa6.96□□□□□ -1.3
YBX3-217ENST00000546164 SMCR5Q8TEV8 140 aa6.96□□□□□ -1.3
YBX3-217ENST00000546164 SPANXDQ9BXN6 97 aa6.96□□□□□ -1.3
YBX3-217ENST00000546164 PPDPFQ9H3Y8 114 aa6.96□□□□□ -1.3
YBX3-217ENST00000546164 TRAV23DV6A0A075B6W5 121 aa6.95□□□□□ -1.3
YBX3-217ENST00000546164 SCGB1D4Q6XE38 83 aa6.95□□□□□ -1.3
YBX3-217ENST00000546164 CBY1Q9Y3M2 126 aa6.95□□□□□ -1.3
YBX3-217ENST00000546164 LPAP08519 4548 aa6.95□□□□□ -1.3
YBX3-217ENST00000546164 Q6ZRX8 168 aa6.94□□□□□ -1.3
YBX3-217ENST00000546164 Q6ZVH6 145 aa6.94□□□□□ -1.3
YBX3-217ENST00000546164 PCP2Q8IVA1 136 aa6.94□□□□□ -1.3
YBX3-217ENST00000546164 ZNF73O43830 326 aaPredicted RBP6.93□□□□□ -1.3
YBX3-217ENST00000546164 CTAG1AP78358 180 aa6.93□□□□□ -1.3
YBX3-217ENST00000546164 LINC00518Q8N0U6 118 aa6.93□□□□□ -1.3
YBX3-217ENST00000546164 IFITM1P13164 125 aa6.92□□□□□ -1.3
YBX3-217ENST00000546164 JOSD1Q15040 202 aaPredicted RBP6.92□□□□□ -1.3
YBX3-217ENST00000546164 LINC00483Q53H64 154 aa6.92□□□□□ -1.3
YBX3-217ENST00000546164 LINC00304Q8N9R0 145 aa6.92□□□□□ -1.3
YBX3-217ENST00000546164 COPS9Q8WXC6 57 aa6.92□□□□□ -1.3
YBX3-217ENST00000546164 Q9BRP9 147 aa6.92□□□□□ -1.3
YBX3-217ENST00000546164 C5orf52A6NGY3 159 aa6.91□□□□□ -1.3
YBX3-217ENST00000546164 ERC2-IT1O76042 136 aa6.9□□□□□ -1.3
YBX3-217ENST00000546164 C3orf22Q8N5N4 141 aa6.9□□□□□ -1.3
YBX3-217ENST00000546164 RNF213Q63HN8 5207 aa6.9□□□□□ -1.31
YBX3-217ENST00000546164 HSBP1L1C9JCN9 74 aa6.89□□□□□ -1.31
YBX3-217ENST00000546164 TSPAN13O95857 204 aa6.89□□□□□ -1.31
YBX3-217ENST00000546164 HINT1P49773 126 aaPredicted RBP6.89□□□□□ -1.31
YBX3-217ENST00000546164 OR13C6PQ8NH95 151 aa6.89□□□□□ -1.31
YBX3-217ENST00000546164 GAGE2AQ6NT46 116 aa6.87□□□□□ -1.31
YBX3-217ENST00000546164 SPAG11AQ6PDA7 123 aa6.87□□□□□ -1.31
YBX3-217ENST00000546164 MUSTN1Q8IVN3 82 aa6.87□□□□□ -1.31
YBX3-217ENST00000546164 PRR4Q16378 134 aa6.86□□□□□ -1.31
YBX3-217ENST00000546164 SCGB1D1O95968 90 aa6.85□□□□□ -1.31
YBX3-217ENST00000546164 ELOF1P60002 83 aaKnown RBP6.85□□□□□ -1.31
YBX3-217ENST00000546164 TRBV7-6A0A0J9YX20 115 aa6.84□□□□□ -1.31
YBX3-217ENST00000546164 C6orf99Q4VX62 202 aa6.84□□□□□ -1.31
YBX3-217ENST00000546164 DHRS4-AS1Q9P1J3 65 aa6.84□□□□□ -1.31
YBX3-217ENST00000546164 COX7BP24311 80 aa6.83□□□□□ -1.32
YBX3-217ENST00000546164 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
YBX3-217ENST00000546164 SSBP3-AS1Q7Z2R9 100 aa6.83□□□□□ -1.32
YBX3-217ENST00000546164 Q8NBF4 154 aa6.83□□□□□ -1.32
YBX3-217ENST00000546164 TRAV13-2A0A0B4J235 113 aa6.82□□□□□ -1.32
YBX3-217ENST00000546164 A6NDN8 102 aa6.82□□□□□ -1.32
YBX3-217ENST00000546164 SPRR1BP22528 89 aa6.82□□□□□ -1.32
YBX3-217ENST00000546164 ST20-AS1Q8NBB2 130 aa6.82□□□□□ -1.32
YBX3-217ENST00000546164 DLEU1O43261 78 aa6.81□□□□□ -1.32
YBX3-217ENST00000546164 SPINK1P00995 79 aa6.81□□□□□ -1.32
YBX3-217ENST00000546164 COX8AP10176 69 aa6.81□□□□□ -1.32
YBX3-217ENST00000546164 MOBPQ13875 183 aa6.81□□□□□ -1.32
YBX3-217ENST00000546164 A0A1B0GWB2 263 aa6.8□□□□□ -1.32
YBX3-217ENST00000546164 IGLV9-49A0A0B4J1Y8 123 aa6.79□□□□□ -1.32
YBX3-217ENST00000546164 A4D1N5 150 aa6.79□□□□□ -1.32
YBX3-217ENST00000546164 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
YBX3-217ENST00000546164 RETNLBQ9BQ08 111 aa6.79□□□□□ -1.32
YBX3-217ENST00000546164 SLC25A34Q6PIV7 304 aa6.78□□□□□ -1.32
YBX3-217ENST00000546164 SMIM11BQ8TCY0 68 aa6.78□□□□□ -1.32
YBX3-217ENST00000546164 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
YBX3-217ENST00000546164 TPRXLQ17RH7 258 aa6.76□□□□□ -1.33
YBX3-217ENST00000546164 KRTAP5-3Q6L8H2 238 aa6.76□□□□□ -1.33
YBX3-217ENST00000546164 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
YBX3-217ENST00000546164 IGLV5-48A0A075B6I7 105 aa6.75□□□□□ -1.33
YBX3-217ENST00000546164 SPATA45Q537H7 98 aa6.75□□□□□ -1.33
YBX3-217ENST00000546164 C9orf153Q5TBE3 101 aa6.75□□□□□ -1.33
YBX3-217ENST00000546164 HIST1H4GQ99525 98 aa6.75□□□□□ -1.33
YBX3-217ENST00000546164 VAMP8Q9BV40 100 aa6.75□□□□□ -1.33
YBX3-217ENST00000546164 NHP2Q9NX24 153 aaKnown RBP6.75□□□□□ -1.33
YBX3-217ENST00000546164 PAM16Q9Y3D7 125 aa6.75□□□□□ -1.33
YBX3-217ENST00000546164 MUC17Q685J3 4493 aa6.74□□□□□ -1.33
YBX3-217ENST00000546164 TEX49A0A1B0GTD5 131 aa6.74□□□□□ -1.33
YBX3-217ENST00000546164 C14orf144Q96I85 54 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms