RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 JOSD1Q15040 202 aaPredicted RBP7.48□□□□□ -1.21
RTN3-213ENST00000543552 GAGE2AQ6NT46 116 aa7.48□□□□□ -1.21
RTN3-213ENST00000543552 Q6ZRX8 168 aa7.48□□□□□ -1.21
RTN3-213ENST00000543552 FABP4P15090 132 aa7.47□□□□□ -1.21
RTN3-213ENST00000543552 C14orf144Q96I85 54 aa7.47□□□□□ -1.21
RTN3-213ENST00000543552 LINC00310P59036 64 aa7.46□□□□□ -1.22
RTN3-213ENST00000543552 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
RTN3-213ENST00000543552 MOBPQ13875 183 aa7.46□□□□□ -1.22
RTN3-213ENST00000543552 TRAV23DV6A0A075B6W5 121 aa7.45□□□□□ -1.22
RTN3-213ENST00000543552 IGLV9-49A0A0B4J1Y8 123 aa7.45□□□□□ -1.22
RTN3-213ENST00000543552 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
RTN3-213ENST00000543552 SSBP3-AS1Q7Z2R9 100 aa7.45□□□□□ -1.22
RTN3-213ENST00000543552 HSBP1L1C9JCN9 74 aa7.44□□□□□ -1.22
RTN3-213ENST00000543552 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
RTN3-213ENST00000543552 Q9BRP9 147 aa7.44□□□□□ -1.22
RTN3-213ENST00000543552 HINT1P49773 126 aaPredicted RBP7.43□□□□□ -1.22
RTN3-213ENST00000543552 KRTAP13-3Q3SY46 172 aa7.43□□□□□ -1.22
RTN3-213ENST00000543552 E9PLD3 99 aa7.42□□□□□ -1.22
RTN3-213ENST00000543552 SLC25A20O43772 301 aa7.42□□□□□ -1.22
RTN3-213ENST00000543552 ZNF73O43830 326 aaPredicted RBP7.42□□□□□ -1.22
RTN3-213ENST00000543552 ERC2-IT1O76042 136 aa7.42□□□□□ -1.22
RTN3-213ENST00000543552 SNRPEP62304 92 aaKnown RBP7.42□□□□□ -1.22
RTN3-213ENST00000543552 A0A0J9YXY3 114 aa7.41□□□□□ -1.22
RTN3-213ENST00000543552 TSTD3H0UI37 97 aa7.41□□□□□ -1.22
RTN3-213ENST00000543552 LCE2AQ5TA79 106 aaPredicted RBP7.41□□□□□ -1.22
RTN3-213ENST00000543552 C9orf153Q5TBE3 101 aa7.4□□□□□ -1.22
RTN3-213ENST00000543552 COLCA2A8K830 154 aa7.39□□□□□ -1.23
RTN3-213ENST00000543552 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
RTN3-213ENST00000543552 NPC2P61916 151 aa7.39□□□□□ -1.23
RTN3-213ENST00000543552 Q8N377 158 aa7.39□□□□□ -1.23
RTN3-213ENST00000543552 ASB16-AS1Q495Z4 193 aa7.38□□□□□ -1.23
RTN3-213ENST00000543552 ADAMTSL4-AS1Q5T5F5 129 aa7.38□□□□□ -1.23
RTN3-213ENST00000543552 SLC25A34Q6PIV7 304 aa7.38□□□□□ -1.23
RTN3-213ENST00000543552 SOSTDC1Q6X4U4 206 aa7.38□□□□□ -1.23
RTN3-213ENST00000543552 SPANXCQ9NY87 97 aa7.38□□□□□ -1.23
RTN3-213ENST00000543552 SYS1-DBNDD2H3BUS1 97 aa7.37□□□□□ -1.23
RTN3-213ENST00000543552 TIMM17BO60830 172 aa7.37□□□□□ -1.23
RTN3-213ENST00000543552 S100A2P29034 98 aa7.36□□□□□ -1.23
RTN3-213ENST00000543552 OR13C6PQ8NH95 151 aa7.36□□□□□ -1.23
RTN3-213ENST00000543552 DHRS4-AS1Q9P1J3 65 aa7.36□□□□□ -1.23
RTN3-213ENST00000543552 DLEU1O43261 78 aa7.35□□□□□ -1.23
RTN3-213ENST00000543552 LINC00308Q8TCZ7 52 aa7.35□□□□□ -1.23
RTN3-213ENST00000543552 KRTAP9-2Q9BYQ4 174 aa7.35□□□□□ -1.23
RTN3-213ENST00000543552 EIF4EBP3O60516 100 aaPredicted RBP7.34□□□□□ -1.23
RTN3-213ENST00000543552 PET117Q6UWS5 81 aa7.34□□□□□ -1.23
RTN3-213ENST00000543552 SPANXDQ9BXN6 97 aa7.34□□□□□ -1.23
RTN3-213ENST00000543552 ZNF815PA8K554 130 aa7.33□□□□□ -1.24
RTN3-213ENST00000543552 LINC01545Q5VT33 79 aa7.33□□□□□ -1.24
RTN3-213ENST00000543552 ST20-AS1Q8NBB2 130 aa7.33□□□□□ -1.24
RTN3-213ENST00000543552 LITAFQ99732 161 aa7.33□□□□□ -1.24
RTN3-213ENST00000543552 LIMD2Q9BT23 127 aa7.33□□□□□ -1.24
RTN3-213ENST00000543552 HIST1H2BKO60814 126 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 HIST1H2BJP06899 126 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 HIST1H2BOP23527 126 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 HIST1H2BBP33778 126 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 HIST1H2BDP58876 126 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 HIST1H2BCP62807 126 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 HIST2H2BEQ16778 126 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.32□□□□□ -1.24
RTN3-213ENST00000543552 COPS9Q8WXC6 57 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 HIST1H2BHQ93079 126 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 HIST1H2BNQ99877 126 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 HIST1H2BMQ99879 126 aa7.32□□□□□ -1.24
RTN3-213ENST00000543552 SPRR1BP22528 89 aa7.31□□□□□ -1.24
RTN3-213ENST00000543552 LINC01547P58512 204 aaPredicted RBP7.31□□□□□ -1.24
RTN3-213ENST00000543552 PYY3Q5JQD4 70 aa7.31□□□□□ -1.24
RTN3-213ENST00000543552 LAMTOR3Q9UHA4 124 aa7.31□□□□□ -1.24
RTN3-213ENST00000543552 COX7BP24311 80 aa7.29□□□□□ -1.24
RTN3-213ENST00000543552 ELOF1P60002 83 aaKnown RBP7.29□□□□□ -1.24
RTN3-213ENST00000543552 XP32Q5T750 250 aa7.29□□□□□ -1.24
RTN3-213ENST00000543552 C20orf202A1L168 122 aa7.28□□□□□ -1.24
RTN3-213ENST00000543552 C6orf99Q4VX62 202 aa7.28□□□□□ -1.24
RTN3-213ENST00000543552 SCGB1D4Q6XE38 83 aa7.28□□□□□ -1.24
RTN3-213ENST00000543552 TRBV7-6A0A0J9YX20 115 aa7.27□□□□□ -1.25
RTN3-213ENST00000543552 M0R143 59 aa7.27□□□□□ -1.25
RTN3-213ENST00000543552 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
RTN3-213ENST00000543552 KRTDAPP60985 99 aa7.26□□□□□ -1.25
RTN3-213ENST00000543552 TAL2Q16559 108 aa7.26□□□□□ -1.25
RTN3-213ENST00000543552 Q6ZVH6 145 aa7.25□□□□□ -1.25
RTN3-213ENST00000543552 TEX49A0A1B0GTD5 131 aa7.24□□□□□ -1.25
RTN3-213ENST00000543552 A0A1B0GWB2 263 aa7.24□□□□□ -1.25
RTN3-213ENST00000543552 IFITM1P13164 125 aa7.24□□□□□ -1.25
RTN3-213ENST00000543552 CD164Q04900 197 aa7.24□□□□□ -1.25
RTN3-213ENST00000543552 HRCT1Q6UXD1 115 aa7.24□□□□□ -1.25
RTN3-213ENST00000543552 TTTY13Q9BZ97 58 aa7.24□□□□□ -1.25
RTN3-213ENST00000543552 PRO1933Q9H354 126 aa7.24□□□□□ -1.25
RTN3-213ENST00000543552 COA6Q5JTJ3 125 aaKnown RBP7.23□□□□□ -1.25
RTN3-213ENST00000543552 DEFB105AQ8NG35 78 aa7.23□□□□□ -1.25
RTN3-213ENST00000543552 A4D1N5 150 aa7.22□□□□□ -1.25
RTN3-213ENST00000543552 A6NDN8 102 aa7.22□□□□□ -1.25
RTN3-213ENST00000543552 Q1RN00 199 aa7.22□□□□□ -1.25
RTN3-213ENST00000543552 H7C2G1 150 aa7.21□□□□□ -1.26
RTN3-213ENST00000543552 SNHG12Q9BXW3 62 aa7.21□□□□□ -1.26
RTN3-213ENST00000543552 KRTAP4-1Q9BYQ7 146 aa7.21□□□□□ -1.26
RTN3-213ENST00000543552 NHP2Q9NX24 153 aaKnown RBP7.21□□□□□ -1.26
RTN3-213ENST00000543552 HIST3H2BBQ8N257 126 aa7.2□□□□□ -1.26
RTN3-213ENST00000543552 IGLV5-48A0A075B6I7 105 aa7.18□□□□□ -1.26
RTN3-213ENST00000543552 TRAV13-2A0A0B4J235 113 aa7.18□□□□□ -1.26
RTN3-213ENST00000543552 Q5XG85 94 aa7.18□□□□□ -1.26
RTN3-213ENST00000543552 C9orf92A6NGG3 77 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms