RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 LINC00528Q8N1L1 170 aa11.49□□□□□ -0.57
CLPB-212ENST00000543042 DNAH2Q9P225 4427 aa11.48□□□□□ -0.57
CLPB-212ENST00000543042 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
CLPB-212ENST00000543042 FAM240AA0A1B0GVK7 77 aa11.47□□□□□ -0.57
CLPB-212ENST00000543042 IGLV5-37A0A075B6J1 123 aa11.47□□□□□ -0.57
CLPB-212ENST00000543042 TRBV7-6A0A0J9YX20 115 aa11.47□□□□□ -0.57
CLPB-212ENST00000543042 A0A1W2PNN7 141 aa11.46□□□□□ -0.57
CLPB-212ENST00000543042 CHTF8P0CG12 524 aa11.46□□□□□ -0.57
CLPB-212ENST00000543042 SMCR5Q8TEV8 140 aa11.46□□□□□ -0.57
CLPB-212ENST00000543042 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
CLPB-212ENST00000543042 C16orf90A8MZG2 172 aa11.44□□□□□ -0.58
CLPB-212ENST00000543042 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLPB-212ENST00000543042 C14orf177Q52M58 125 aa11.42□□□□□ -0.58
CLPB-212ENST00000543042 LAMTOR3Q9UHA4 124 aa11.42□□□□□ -0.58
CLPB-212ENST00000543042 KRTAP21-3Q3LHN1 58 aa11.42□□□□□ -0.58
CLPB-212ENST00000543042 KRTAP4-16G5E9R7 235 aaPredicted RBP11.41□□□□□ -0.58
CLPB-212ENST00000543042 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.41□□□□□ -0.58
CLPB-212ENST00000543042 ACYP1P07311 99 aa11.41□□□□□ -0.58
CLPB-212ENST00000543042 JMJD7-PLA2G4BH0Y9G9 81 aa11.4□□□□□ -0.58
CLPB-212ENST00000543042 C9orf163Q8N9P6 203 aa11.39□□□□□ -0.59
CLPB-212ENST00000543042 Q9BRP9 147 aa11.39□□□□□ -0.59
CLPB-212ENST00000543042 B5MCH6 92 aa11.38□□□□□ -0.59
CLPB-212ENST00000543042 SPRR1AP35321 89 aa11.38□□□□□ -0.59
CLPB-212ENST00000543042 HECTD4Q9Y4D8 3996 aa11.38□□□□□ -0.59
CLPB-212ENST00000543042 PANO1I0J062 215 aa11.38□□□□□ -0.59
CLPB-212ENST00000543042 PRYO14603 147 aa11.38□□□□□ -0.59
CLPB-212ENST00000543042 LINC00846Q9NV44 126 aa11.38□□□□□ -0.59
CLPB-212ENST00000543042 CCKP06307 115 aa11.37□□□□□ -0.59
CLPB-212ENST00000543042 RBM3P98179 157 aaKnown RBP11.37□□□□□ -0.59
CLPB-212ENST00000543042 Q6ZR54 194 aa11.37□□□□□ -0.59
CLPB-212ENST00000543042 Q6ZRX8 168 aa11.37□□□□□ -0.59
CLPB-212ENST00000543042 SDIM1Q6ZPB5 146 aa11.36□□□□□ -0.59
CLPB-212ENST00000543042 DEFB105AQ8NG35 78 aa11.36□□□□□ -0.59
CLPB-212ENST00000543042 ETDCA0A1B0GVM5 59 aa11.36□□□□□ -0.59
CLPB-212ENST00000543042 KRTAP11-1Q8IUC1 163 aa11.35□□□□□ -0.59
CLPB-212ENST00000543042 A0A087WTM6 91 aa11.35□□□□□ -0.59
CLPB-212ENST00000543042 LY6G6CO95867 125 aa11.35□□□□□ -0.59
CLPB-212ENST00000543042 PHF5AQ7RTV0 110 aaKnown RBP11.34□□□□□ -0.59
CLPB-212ENST00000543042 ERC2-IT1O76042 136 aa11.33□□□□□ -0.6
CLPB-212ENST00000543042 REG3GQ6UW15 175 aa11.33□□□□□ -0.6
CLPB-212ENST00000543042 ST20-AS1Q8NBB2 130 aa11.33□□□□□ -0.6
CLPB-212ENST00000543042 SCGB1A1P11684 91 aa11.32□□□□□ -0.6
CLPB-212ENST00000543042 Q6ZQT0 140 aa11.32□□□□□ -0.6
CLPB-212ENST00000543042 NDUFV3P56181 108 aaKnown RBP11.32□□□□□ -0.6
CLPB-212ENST00000543042 SRRM2Q9UQ35 2752 aaKnown RBP11.31□□□□□ -0.6
CLPB-212ENST00000543042 LINC01547P58512 204 aaPredicted RBP11.3□□□□□ -0.6
CLPB-212ENST00000543042 Q8N377 158 aa11.3□□□□□ -0.6
CLPB-212ENST00000543042 LINC00643Q86TS7 51 aa11.3□□□□□ -0.6
CLPB-212ENST00000543042 C3orf22Q8N5N4 141 aa11.3□□□□□ -0.6
CLPB-212ENST00000543042 DHRS4-AS1Q9P1J3 65 aa11.29□□□□□ -0.6
CLPB-212ENST00000543042 UBE2BP63146 152 aa11.29□□□□□ -0.6
CLPB-212ENST00000543042 DSCR8Q96T75 97 aa11.29□□□□□ -0.6
CLPB-212ENST00000543042 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.29□□□□□ -0.6
CLPB-212ENST00000543042 PRLHP81277 87 aa11.28□□□□□ -0.6
CLPB-212ENST00000543042 DPH3Q96FX2 82 aa11.28□□□□□ -0.6
CLPB-212ENST00000543042 H3BQ85 93 aa11.27□□□□□ -0.6
CLPB-212ENST00000543042 DNAH17Q9UFH2 4485 aa11.27□□□□□ -0.61
CLPB-212ENST00000543042 LOC110117498A0A087WWA1 95 aa11.27□□□□□ -0.61
CLPB-212ENST00000543042 WWC2-AS2Q96NR7 200 aa11.26□□□□□ -0.61
CLPB-212ENST00000543042 C1orf134Q5TEV5 83 aa11.26□□□□□ -0.61
CLPB-212ENST00000543042 FAM19A1Q7Z5A9 133 aa11.26□□□□□ -0.61
CLPB-212ENST00000543042 HYDINQ4G0P3 5121 aa11.25□□□□□ -0.61
CLPB-212ENST00000543042 TRBV7-4A0A0J9YYF1 115 aa11.24□□□□□ -0.61
CLPB-212ENST00000543042 GHRHP01286 108 aa11.24□□□□□ -0.61
CLPB-212ENST00000543042 IGKV3D-7A0A0C4DH55 119 aa11.24□□□□□ -0.61
CLPB-212ENST00000543042 TRBV7-7A0A0K0K1E9 115 aa11.23□□□□□ -0.61
CLPB-212ENST00000543042 RTL8CO15255 209 aa11.23□□□□□ -0.61
CLPB-212ENST00000543042 LINC00476Q8WZB0 136 aa11.23□□□□□ -0.61
CLPB-212ENST00000543042 Q6Q795 121 aa11.21□□□□□ -0.61
CLPB-212ENST00000543042 SPACA4Q8TDM5 124 aa11.2□□□□□ -0.62
CLPB-212ENST00000543042 HIGD2AQ9BW72 106 aa11.2□□□□□ -0.62
CLPB-212ENST00000543042 LINC00474Q9P2X8 69 aa11.2□□□□□ -0.62
CLPB-212ENST00000543042 TNP2Q05952 138 aa11.19□□□□□ -0.62
CLPB-212ENST00000543042 DNAH6Q9C0G6 4158 aa11.19□□□□□ -0.62
CLPB-212ENST00000543042 IGLV5-48A0A075B6I7 105 aa11.18□□□□□ -0.62
CLPB-212ENST00000543042 FRAS1Q86XX4 4008 aa11.18□□□□□ -0.62
CLPB-212ENST00000543042 PDE6GP18545 87 aa11.17□□□□□ -0.62
CLPB-212ENST00000543042 EPM2AB3EWF7 344 aa11.16□□□□□ -0.62
CLPB-212ENST00000543042 Q6JHZ5 121 aa11.16□□□□□ -0.62
CLPB-212ENST00000543042 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.62
CLPB-212ENST00000543042 ALMS1Q8TCU4 4167 aa11.15□□□□□ -0.62
CLPB-212ENST00000543042 DNAH8Q96JB1 4490 aa11.14□□□□□ -0.63
CLPB-212ENST00000543042 IGLV5-52A0A0A0MRZ9 124 aa11.14□□□□□ -0.63
CLPB-212ENST00000543042 SMIM29Q86T20 159 aa11.14□□□□□ -0.63
CLPB-212ENST00000543042 UBL5Q9BZL1 73 aa11.14□□□□□ -0.63
CLPB-212ENST00000543042 DNAH11Q96DT5 4516 aa11.14□□□□□ -0.63
CLPB-212ENST00000543042 IMUPQ9GZP8 106 aa11.14□□□□□ -0.63
CLPB-212ENST00000543042 A0A087WVE0 104 aa11.13□□□□□ -0.63
CLPB-212ENST00000543042 A0A0G2JQZ4 141 aa11.13□□□□□ -0.63
CLPB-212ENST00000543042 DNAH5Q8TE73 4624 aa11.12□□□□□ -0.63
CLPB-212ENST00000543042 FAM236AA0A1B0GUQ0 79 aa11.12□□□□□ -0.63
CLPB-212ENST00000543042 FAM236BA0A1B0GV22 79 aa11.12□□□□□ -0.63
CLPB-212ENST00000543042 Q6ZVQ6 151 aa11.12□□□□□ -0.63
CLPB-212ENST00000543042 ANAPC13Q9BS18 74 aa11.11□□□□□ -0.63
CLPB-212ENST00000543042 UBE2AP49459 152 aa11.1□□□□□ -0.63
CLPB-212ENST00000543042 KRTAP10-2P60368 255 aa11.1□□□□□ -0.63
CLPB-212ENST00000543042 C3orf84H3BNL1 204 aa11.09□□□□□ -0.63
CLPB-212ENST00000543042 FAT2Q9NYQ8 4349 aa11.09□□□□□ -0.63
CLPB-212ENST00000543042 C1orf137Q5JT78 98 aa11.09□□□□□ -0.63
CLPB-212ENST00000543042 HAMPP81172 84 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms