RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 C3orf79P0CE67 100 aa10.05□□□□□ -0.8
LTBR-210ENST00000542830 JOSD1Q15040 202 aaPredicted RBP10.05□□□□□ -0.8
LTBR-210ENST00000542830 GAGE2AQ6NT46 116 aa10.04□□□□□ -0.8
LTBR-210ENST00000542830 SPANXCQ9NY87 97 aa10.04□□□□□ -0.8
LTBR-210ENST00000542830 ZNF815PA8K554 130 aa10.03□□□□□ -0.8
LTBR-210ENST00000542830 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
LTBR-210ENST00000542830 LITAFQ99732 161 aa10.03□□□□□ -0.8
LTBR-210ENST00000542830 Q9BRP9 147 aa10.03□□□□□ -0.8
LTBR-210ENST00000542830 IGLV7-46A0A075B6I9 117 aa10.02□□□□□ -0.81
LTBR-210ENST00000542830 ZNF73O43830 326 aaPredicted RBP10.02□□□□□ -0.81
LTBR-210ENST00000542830 ERC2-IT1O76042 136 aa10.02□□□□□ -0.81
LTBR-210ENST00000542830 HINT1P49773 126 aaPredicted RBP10.02□□□□□ -0.81
LTBR-210ENST00000542830 KRTDAPP60985 99 aa10.02□□□□□ -0.81
LTBR-210ENST00000542830 Q8NBF4 154 aa10.02□□□□□ -0.81
LTBR-210ENST00000542830 LINC00308Q8TCZ7 52 aa10.02□□□□□ -0.81
LTBR-210ENST00000542830 C20orf202A1L168 122 aa10.01□□□□□ -0.81
LTBR-210ENST00000542830 TPRXLQ17RH7 258 aa10.01□□□□□ -0.81
LTBR-210ENST00000542830 SPINK1P00995 79 aa9.99□□□□□ -0.81
LTBR-210ENST00000542830 C5orf52A6NGY3 159 aa9.98□□□□□ -0.81
LTBR-210ENST00000542830 AKR1D1P51857 326 aa9.98□□□□□ -0.81
LTBR-210ENST00000542830 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
LTBR-210ENST00000542830 SSBP3-AS1Q7Z2R9 100 aa9.98□□□□□ -0.81
LTBR-210ENST00000542830 OR13C6PQ8NH95 151 aa9.98□□□□□ -0.81
LTBR-210ENST00000542830 CDIP1Q9H305 208 aa9.98□□□□□ -0.81
LTBR-210ENST00000542830 IGLV9-49A0A0B4J1Y8 123 aa9.97□□□□□ -0.81
LTBR-210ENST00000542830 MOBPQ13875 183 aa9.97□□□□□ -0.81
LTBR-210ENST00000542830 LINC00518Q8N0U6 118 aa9.97□□□□□ -0.81
LTBR-210ENST00000542830 SPANXDQ9BXN6 97 aa9.97□□□□□ -0.81
LTBR-210ENST00000542830 TTTY13Q9BZ97 58 aa9.97□□□□□ -0.81
LTBR-210ENST00000542830 SCGB1D4Q6XE38 83 aa9.95□□□□□ -0.82
LTBR-210ENST00000542830 COPS9Q8WXC6 57 aa9.95□□□□□ -0.82
LTBR-210ENST00000542830 RPS29P62273 56 aaKnown RBP9.93□□□□□ -0.82
LTBR-210ENST00000542830 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
LTBR-210ENST00000542830 ANKRD39Q53RE8 183 aa9.92□□□□□ -0.82
LTBR-210ENST00000542830 DHRS4-AS1Q9P1J3 65 aa9.92□□□□□ -0.82
LTBR-210ENST00000542830 MUC2Q02817 5179 aa9.92□□□□□ -0.82
LTBR-210ENST00000542830 IFITM1P13164 125 aa9.9□□□□□ -0.82
LTBR-210ENST00000542830 C9orf153Q5TBE3 101 aa9.9□□□□□ -0.82
LTBR-210ENST00000542830 Q6ZVH6 145 aa9.9□□□□□ -0.82
LTBR-210ENST00000542830 ATOH7Q8N100 152 aa9.9□□□□□ -0.82
LTBR-210ENST00000542830 ST20-AS1Q8NBB2 130 aa9.9□□□□□ -0.82
LTBR-210ENST00000542830 SNRPEP62304 92 aaKnown RBP9.89□□□□□ -0.83
LTBR-210ENST00000542830 SLC25A34Q6PIV7 304 aa9.89□□□□□ -0.83
LTBR-210ENST00000542830 SPRR1BP22528 89 aa9.87□□□□□ -0.83
LTBR-210ENST00000542830 COX7BP24311 80 aa9.87□□□□□ -0.83
LTBR-210ENST00000542830 ELOF1P60002 83 aaKnown RBP9.87□□□□□ -0.83
LTBR-210ENST00000542830 C6orf99Q4VX62 202 aa9.87□□□□□ -0.83
LTBR-210ENST00000542830 SLC25A20O43772 301 aa9.86□□□□□ -0.83
LTBR-210ENST00000542830 Q8N377 158 aa9.86□□□□□ -0.83
LTBR-210ENST00000542830 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
LTBR-210ENST00000542830 TRBV7-6A0A0J9YX20 115 aa9.85□□□□□ -0.83
LTBR-210ENST00000542830 PCP2Q8IVA1 136 aa9.85□□□□□ -0.83
LTBR-210ENST00000542830 S100A1P23297 94 aa9.84□□□□□ -0.83
LTBR-210ENST00000542830 S100A2P29034 98 aa9.84□□□□□ -0.83
LTBR-210ENST00000542830 KRTAP13-3Q3SY46 172 aa9.83□□□□□ -0.84
LTBR-210ENST00000542830 MUSTN1Q8IVN3 82 aa9.83□□□□□ -0.84
LTBR-210ENST00000542830 HIST3H2BBQ8N257 126 aa9.83□□□□□ -0.84
LTBR-210ENST00000542830 LAMTOR3Q9UHA4 124 aa9.83□□□□□ -0.84
LTBR-210ENST00000542830 A0A1B0GWB2 263 aa9.82□□□□□ -0.84
LTBR-210ENST00000542830 A6NDN8 102 aa9.82□□□□□ -0.84
LTBR-210ENST00000542830 HIST1H2BLQ99880 126 aa9.81□□□□□ -0.84
LTBR-210ENST00000542830 TRAV13-2A0A0B4J235 113 aa9.8□□□□□ -0.84
LTBR-210ENST00000542830 HSBP1L1C9JCN9 74 aa9.8□□□□□ -0.84
LTBR-210ENST00000542830 TAL2Q16559 108 aa9.8□□□□□ -0.84
LTBR-210ENST00000542830 TEX49A0A1B0GTD5 131 aa9.78□□□□□ -0.84
LTBR-210ENST00000542830 A4D1N5 150 aa9.78□□□□□ -0.84
LTBR-210ENST00000542830 S100A6P06703 90 aa9.78□□□□□ -0.84
LTBR-210ENST00000542830 LIMD2Q9BT23 127 aa9.77□□□□□ -0.85
LTBR-210ENST00000542830 DEFB105AQ8NG35 78 aa9.76□□□□□ -0.85
LTBR-210ENST00000542830 NHP2Q9NX24 153 aaKnown RBP9.75□□□□□ -0.85
LTBR-210ENST00000542830 Q1RN00 199 aa9.73□□□□□ -0.85
LTBR-210ENST00000542830 ASB16-AS1Q495Z4 193 aa9.73□□□□□ -0.85
LTBR-210ENST00000542830 SMIM11BQ8TCY0 68 aa9.73□□□□□ -0.85
LTBR-210ENST00000542830 PRO1933Q9H354 126 aa9.73□□□□□ -0.85
LTBR-210ENST00000542830 IGLV5-48A0A075B6I7 105 aa9.72□□□□□ -0.85
LTBR-210ENST00000542830 CD164Q04900 197 aa9.72□□□□□ -0.85
LTBR-210ENST00000542830 HRCT1Q6UXD1 115 aa9.72□□□□□ -0.85
LTBR-210ENST00000542830 SEC61BP60468 96 aaKnown RBP9.71□□□□□ -0.86
LTBR-210ENST00000542830 VAMP3Q15836 100 aa9.7□□□□□ -0.86
LTBR-210ENST00000542830 LINC01547P58512 204 aaPredicted RBP9.69□□□□□ -0.86
LTBR-210ENST00000542830 SMIM29Q86T20 159 aa9.69□□□□□ -0.86
LTBR-210ENST00000542830 FAT4Q6V0I7 4981 aa9.67□□□□□ -0.86
LTBR-210ENST00000542830 H7C2G1 150 aa9.67□□□□□ -0.86
LTBR-210ENST00000542830 SCGB1D1O95968 90 aa9.67□□□□□ -0.86
LTBR-210ENST00000542830 XP32Q5T750 250 aa9.66□□□□□ -0.86
LTBR-210ENST00000542830 Q5XG85 94 aa9.64□□□□□ -0.87
LTBR-210ENST00000542830 LCE2AQ5TA79 106 aaPredicted RBP9.63□□□□□ -0.87
LTBR-210ENST00000542830 LINC00575Q6W349 94 aa9.63□□□□□ -0.87
LTBR-210ENST00000542830 COX8AP10176 69 aa9.62□□□□□ -0.87
LTBR-210ENST00000542830 HIST1H4GQ99525 98 aa9.62□□□□□ -0.87
LTBR-210ENST00000542830 hADV29S1A0JD25 119 aa9.6□□□□□ -0.87
LTBR-210ENST00000542830 F8WEM9 126 aa9.6□□□□□ -0.87
LTBR-210ENST00000542830 DLEU1O43261 78 aa9.6□□□□□ -0.87
LTBR-210ENST00000542830 BVES-AS1Q5T3Y7 98 aa9.58□□□□□ -0.88
LTBR-210ENST00000542830 Q6ZQY7 126 aa9.58□□□□□ -0.88
LTBR-210ENST00000542830 A0A0G2JQZ4 141 aa9.56□□□□□ -0.88
LTBR-210ENST00000542830 C12orf57Q99622 126 aa9.56□□□□□ -0.88
LTBR-210ENST00000542830 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.55□□□□□ -0.88
LTBR-210ENST00000542830 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
LTBR-210ENST00000542830 C9orf92A6NGG3 77 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms