RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MGST1P10620 155 aaKnown RBP2.18□□□□□ -2.06
SNHG1-217ENST00000541578 RPL28P46779 137 aaKnown RBP2.18□□□□□ -2.06
SNHG1-217ENST00000541578 UBE2D1P51668 147 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 KLKP1Q107X0 134 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 SS18Q15532 418 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 ATXN8Q156A1 80 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 ARL17AQ8IVW1 177 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 DIRC1Q969H9 104 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 Q96M85 177 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 C20orf166-AS1Q96NR2 134 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 SLC50A1Q9BRV3 221 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 CYSTM1Q9H1C7 97 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 V9GYV3 84 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 FRAS1Q86XX4 4008 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 IGKV1D-43A0A0B4J1Z2 117 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 ODF3BA8MYP8 253 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 H7BZZ5 65 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 H7C2G1 150 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 IGKV1-5P01602 117 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 IFI27P40305 119 aaPredicted RBP2.17□□□□□ -2.06
SNHG1-217ENST00000541578 RBM3P98179 157 aaKnown RBP2.17□□□□□ -2.06
SNHG1-217ENST00000541578 Q1T7F1 81 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 Q6JHZ5 121 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 HCP5Q6MZN7 132 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 ATP11AUNQ6ZP68 121 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 C4orf3Q8WVX3 66 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 ZNF714Q96N38 554 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 TAS2R4Q9NYW5 299 aa2.17□□□□□ -2.06
SNHG1-217ENST00000541578 MRPL35Q9NZE8 188 aaKnown RBP2.17□□□□□ -2.06
SNHG1-217ENST00000541578 TMSB15BA0A087X1C1 80 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 TRBV7-1A0A0A6YYK4 115 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 TRAV13-2A0A0B4J235 113 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 H3BSH0 61 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 M0R135 149 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 CIRBPQ14011 172 aaKnown RBP2.16□□□□□ -2.06
SNHG1-217ENST00000541578 RHOHQ15669 191 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 ZNF826PQ6ZT77 177 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 FAM216BQ8N7L0 139 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 DYNLRB2Q8TF09 96 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 GAFA1Q96PS6 74 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 SCGB3A1Q96QR1 104 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 TTTY10Q9BZA0 68 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 PCLOQ9Y6V0 5065 aa2.16□□□□□ -2.06
SNHG1-217ENST00000541578 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.06
SNHG1-217ENST00000541578 STARD9Q9P2P6 4700 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 IGHV3-64A0A075B6Q5 118 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 TRAV7A0A075B6U4 112 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 IGKV1-9A0A0C4DH69 117 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 TEX49A0A1B0GTD5 131 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 LINC01549A6NIU2 74 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 TMEM14DPA8MWL7 114 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 BUB1B-PAK6H3BSN5 160 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 FUSP35637 526 aaKnown RBP eCLIP2.15□□□□□ -2.07
SNHG1-217ENST00000541578 EDDM3BP56851 147 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 KISS1Q15726 138 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 ESRGQ1W209 222 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 ASB16-AS1Q495Z4 193 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 LINC01554Q52M75 96 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 ATP5EP2Q5VTU8 51 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 LYPD5Q6UWN5 251 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 C2orf82Q6UX34 121 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 NPCDR1Q9BY65 106 aa2.15□□□□□ -2.07
SNHG1-217ENST00000541578 KMT2AQ03164 3969 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 A6NN06 94 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 IGLV1-51P01701 117 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 SAA1P0DJI8 122 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-217ENST00000541578 RNASE4P34096 147 aaKnown RBP2.14□□□□□ -2.07
SNHG1-217ENST00000541578 PRB3Q04118 309 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-217ENST00000541578 PLGLAQ15195 96 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 S100A7L2Q5SY68 101 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 MIR17HGQ75NE6 70 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 FAM223AQ8IWN6 122 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 Q8IYB0 196 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 DYNAPQ8N1N2 210 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 C5orf56Q8N8D9 126 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 TIMM21Q9BVV7 248 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 LINC00474Q9P2X8 69 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 PRO1854Q9UHT4 67 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 LHFPL6Q9Y693 200 aa2.14□□□□□ -2.07
SNHG1-217ENST00000541578 SRRM2Q9UQ35 2752 aaKnown RBP2.14□□□□□ -2.07
SNHG1-217ENST00000541578 HUWE1Q7Z6Z7 4374 aaKnown RBP2.13□□□□□ -2.07
SNHG1-217ENST00000541578 TRGV4A0A0C4DH28 118 aa2.13□□□□□ -2.07
SNHG1-217ENST00000541578 TRBV30A0A0K0K1B3 111 aa2.13□□□□□ -2.07
SNHG1-217ENST00000541578 TRBV10-3A0A0K0K1G6 114 aa2.13□□□□□ -2.07
SNHG1-217ENST00000541578 IGLV3-1P01715 115 aa2.13□□□□□ -2.07
SNHG1-217ENST00000541578 COX6CP09669 75 aa2.13□□□□□ -2.07
SNHG1-217ENST00000541578 CCL3L1P16619 93 aa2.13□□□□□ -2.07
SNHG1-217ENST00000541578 FCER1GP30273 86 aa2.13□□□□□ -2.07
SNHG1-217ENST00000541578 RPS27P42677 84 aaKnown RBP2.13□□□□□ -2.07
SNHG1-217ENST00000541578 DEFB136Q30KP8 78 aa2.13□□□□□ -2.07
SNHG1-217ENST00000541578 C10orf99Q6UWK7 81 aa2.13□□□□□ -2.07
SNHG1-217ENST00000541578 Q9BRP9 147 aa2.13□□□□□ -2.07
SNHG1-217ENST00000541578 PLECQ15149 4684 aaKnown RBP2.13□□□□□ -2.07
SNHG1-217ENST00000541578 TMEM30CPA0ZSE6 113 aa2.12□□□□□ -2.07
SNHG1-217ENST00000541578 FAM223BA6NKX1 122 aa2.12□□□□□ -2.07
SNHG1-217ENST00000541578 ERC2-IT1O76042 136 aa2.12□□□□□ -2.07
SNHG1-217ENST00000541578 PLNP26678 52 aa2.12□□□□□ -2.07
SNHG1-217ENST00000541578 SPANXN1Q5VSR9 72 aa2.12□□□□□ -2.07
SNHG1-217ENST00000541578 LINC00322Q6ZN03 302 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-217ENST00000541578 ZNF818PQ6ZRF7 136 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms