RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 JMJD7-PLA2G4BH0Y9G9 81 aa9.64□□□□□ -0.87
SFSWAP-210ENST00000541286 KIAA0087Q14695 138 aa9.64□□□□□ -0.87
SFSWAP-210ENST00000541286 SERP1Q9Y6X1 66 aa9.63□□□□□ -0.87
SFSWAP-210ENST00000541286 FAM229BQ4G0N7 80 aa9.63□□□□□ -0.87
SFSWAP-210ENST00000541286 MIFP14174 115 aa9.62□□□□□ -0.87
SFSWAP-210ENST00000541286 TRBV7-6A0A0J9YX20 115 aa9.62□□□□□ -0.87
SFSWAP-210ENST00000541286 HIGD2BQ4VC39 106 aa9.62□□□□□ -0.87
SFSWAP-210ENST00000541286 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.62□□□□□ -0.87
SFSWAP-210ENST00000541286 Q6ZVQ6 151 aa9.61□□□□□ -0.87
SFSWAP-210ENST00000541286 C11orf45Q8TAV5 145 aa9.61□□□□□ -0.87
SFSWAP-210ENST00000541286 LYRM9A8MSI8 78 aa9.6□□□□□ -0.87
SFSWAP-210ENST00000541286 B9D2Q9BPU9 175 aa9.6□□□□□ -0.87
SFSWAP-210ENST00000541286 SPART-AS1P0CW21 52 aa9.6□□□□□ -0.87
SFSWAP-210ENST00000541286 Q6ZQY7 126 aa9.6□□□□□ -0.87
SFSWAP-210ENST00000541286 TRAV7A0A075B6U4 112 aa9.6□□□□□ -0.87
SFSWAP-210ENST00000541286 LINC00612Q8N6U2 182 aa9.6□□□□□ -0.87
SFSWAP-210ENST00000541286 Q6ZQT0 140 aa9.58□□□□□ -0.88
SFSWAP-210ENST00000541286 V9GYY9 64 aa9.58□□□□□ -0.88
SFSWAP-210ENST00000541286 KMT2AQ03164 3969 aa9.58□□□□□ -0.88
SFSWAP-210ENST00000541286 DNAH10Q8IVF4 4471 aa9.56□□□□□ -0.88
SFSWAP-210ENST00000541286 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
SFSWAP-210ENST00000541286 SMIM26A0A096LP01 95 aa9.55□□□□□ -0.88
SFSWAP-210ENST00000541286 DEFB131BA0A096LNP1 70 aa9.55□□□□□ -0.88
SFSWAP-210ENST00000541286 TRBV10-3A0A0K0K1G6 114 aa9.55□□□□□ -0.88
SFSWAP-210ENST00000541286 COX17Q14061 63 aa9.55□□□□□ -0.88
SFSWAP-210ENST00000541286 ATP5EP2Q5VTU8 51 aa9.55□□□□□ -0.88
SFSWAP-210ENST00000541286 ZNF561-AS1K7EIQ3 104 aa9.54□□□□□ -0.88
SFSWAP-210ENST00000541286 LINC00575Q6W349 94 aa9.54□□□□□ -0.88
SFSWAP-210ENST00000541286 LELP1Q5T871 98 aa9.52□□□□□ -0.89
SFSWAP-210ENST00000541286 WFDC10BQ8IUB3 73 aa9.52□□□□□ -0.89
SFSWAP-210ENST00000541286 CAMK2N2Q96S95 79 aa9.52□□□□□ -0.89
SFSWAP-210ENST00000541286 DNAH1Q9P2D7 4330 aa9.52□□□□□ -0.89
SFSWAP-210ENST00000541286 BPY2O14599 106 aa9.52□□□□□ -0.89
SFSWAP-210ENST00000541286 KLKP1Q107X0 134 aa9.52□□□□□ -0.89
SFSWAP-210ENST00000541286 C6orf48Q9UBA6 75 aa9.5□□□□□ -0.89
SFSWAP-210ENST00000541286 PRR4Q16378 134 aa9.5□□□□□ -0.89
SFSWAP-210ENST00000541286 NREPQ16612 68 aa9.5□□□□□ -0.89
SFSWAP-210ENST00000541286 C1orf195Q5TG92 126 aa9.5□□□□□ -0.89
SFSWAP-210ENST00000541286 HYDINQ4G0P3 5121 aa9.49□□□□□ -0.89
SFSWAP-210ENST00000541286 C3orf84H3BNL1 204 aa9.49□□□□□ -0.89
SFSWAP-210ENST00000541286 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
SFSWAP-210ENST00000541286 LINC00167Q96N53 147 aa9.49□□□□□ -0.89
SFSWAP-210ENST00000541286 HIGD2AQ9BW72 106 aa9.48□□□□□ -0.89
SFSWAP-210ENST00000541286 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
SFSWAP-210ENST00000541286 MUC7Q8TAX7 377 aa9.47□□□□□ -0.89
SFSWAP-210ENST00000541286 KMT2CQ8NEZ4 4911 aaKnown RBP9.46□□□□□ -0.89
SFSWAP-210ENST00000541286 DEFB105AQ8NG35 78 aa9.46□□□□□ -0.89
SFSWAP-210ENST00000541286 IGKV2D-24A0A075B6R9 120 aa9.46□□□□□ -0.9
SFSWAP-210ENST00000541286 EPM2AB3EWF7 344 aa9.46□□□□□ -0.9
SFSWAP-210ENST00000541286 ZNF73O43830 326 aaPredicted RBP9.45□□□□□ -0.9
SFSWAP-210ENST00000541286 TRBV7-4A0A0J9YYF1 115 aa9.44□□□□□ -0.9
SFSWAP-210ENST00000541286 COX7BP24311 80 aa9.44□□□□□ -0.9
SFSWAP-210ENST00000541286 ESRGQ1W209 222 aa9.44□□□□□ -0.9
SFSWAP-210ENST00000541286 Q6ZRU5 148 aa9.44□□□□□ -0.9
SFSWAP-210ENST00000541286 FAM30AQ9NZY2 134 aa9.44□□□□□ -0.9
SFSWAP-210ENST00000541286 IGLV6-57P01721 117 aa9.43□□□□□ -0.9
SFSWAP-210ENST00000541286 PSPHP1O15172 72 aa9.42□□□□□ -0.9
SFSWAP-210ENST00000541286 PRR34Q9NV39 138 aa9.42□□□□□ -0.9
SFSWAP-210ENST00000541286 DYNC2H1Q8NCM8 4307 aaKnown RBP9.4□□□□□ -0.9
SFSWAP-210ENST00000541286 VPS13DQ5THJ4 4388 aa9.4□□□□□ -0.9
SFSWAP-210ENST00000541286 FUSP35637 526 aaKnown RBP eCLIP9.4□□□□□ -0.9
SFSWAP-210ENST00000541286 LOC110117498A0A087WWA1 95 aa9.39□□□□□ -0.91
SFSWAP-210ENST00000541286 FRAS1Q86XX4 4008 aa9.39□□□□□ -0.91
SFSWAP-210ENST00000541286 CXCL6P80162 114 aa9.37□□□□□ -0.91
SFSWAP-210ENST00000541286 PRYO14603 147 aa9.37□□□□□ -0.91
SFSWAP-210ENST00000541286 LINC00588Q9Y4M8 146 aa9.37□□□□□ -0.91
SFSWAP-210ENST00000541286 RPL37AP8A6NKH3 93 aa9.35□□□□□ -0.91
SFSWAP-210ENST00000541286 DNAH2Q9P225 4427 aa9.35□□□□□ -0.91
SFSWAP-210ENST00000541286 VPREB1P12018 145 aa9.35□□□□□ -0.91
SFSWAP-210ENST00000541286 Q6ZRP5 223 aa9.35□□□□□ -0.91
SFSWAP-210ENST00000541286 NKAPP1Q8N9T2 125 aa9.35□□□□□ -0.91
SFSWAP-210ENST00000541286 A8MU10 97 aa9.34□□□□□ -0.91
SFSWAP-210ENST00000541286 M0R378 163 aa9.33□□□□□ -0.92
SFSWAP-210ENST00000541286 C15orf56Q8N910 161 aa9.33□□□□□ -0.92
SFSWAP-210ENST00000541286 ELOF1P60002 83 aaKnown RBP9.33□□□□□ -0.92
SFSWAP-210ENST00000541286 IGKV4-1P06312 121 aa9.32□□□□□ -0.92
SFSWAP-210ENST00000541286 SMIM29Q86T20 159 aa9.32□□□□□ -0.92
SFSWAP-210ENST00000541286 NDUFC1O43677 76 aa9.32□□□□□ -0.92
SFSWAP-210ENST00000541286 DEFB116Q30KQ4 102 aa9.32□□□□□ -0.92
SFSWAP-210ENST00000541286 APLNQ9ULZ1 77 aa9.32□□□□□ -0.92
SFSWAP-210ENST00000541286 GVQW2A0A096LPI5 108 aaPredicted RBP9.31□□□□□ -0.92
SFSWAP-210ENST00000541286 KRTAP1-5Q9BYS1 174 aa9.31□□□□□ -0.92
SFSWAP-210ENST00000541286 SYCNQ0VAF6 134 aa9.31□□□□□ -0.92
SFSWAP-210ENST00000541286 SACSQ9NZJ4 4579 aa9.31□□□□□ -0.92
SFSWAP-210ENST00000541286 PDE6GP18545 87 aa9.29□□□□□ -0.92
SFSWAP-210ENST00000541286 SERTAD4-AS1Q5TG53 156 aa9.29□□□□□ -0.92
SFSWAP-210ENST00000541286 OCR1Q9BZK8 76 aa9.29□□□□□ -0.92
SFSWAP-210ENST00000541286 A0A0G2JQZ4 141 aa9.28□□□□□ -0.92
SFSWAP-210ENST00000541286 A0A1W2PNN7 141 aa9.28□□□□□ -0.92
SFSWAP-210ENST00000541286 CASC10Q5T4H9 136 aa9.28□□□□□ -0.92
SFSWAP-210ENST00000541286 UBE2DNLQ8IWF7 75 aa9.28□□□□□ -0.92
SFSWAP-210ENST00000541286 FAM168BA1KXE4 195 aa9.27□□□□□ -0.92
SFSWAP-210ENST00000541286 SRRM2Q9UQ35 2752 aaKnown RBP9.27□□□□□ -0.92
SFSWAP-210ENST00000541286 BCE1O60756 84 aa9.27□□□□□ -0.93
SFSWAP-210ENST00000541286 LY6G6CO95867 125 aa9.27□□□□□ -0.93
SFSWAP-210ENST00000541286 C1orf64Q8NEQ6 169 aa9.26□□□□□ -0.93
SFSWAP-210ENST00000541286 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
SFSWAP-210ENST00000541286 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
SFSWAP-210ENST00000541286 C7orf33Q8WU49 177 aa9.26□□□□□ -0.93
SFSWAP-210ENST00000541286 KRTAP26-1Q6PEX3 210 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms