RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PRYO14603 147 aa5.51□□□□□ -1.53
SNHG1-215ENST00000540904 TIMM17BO60830 172 aa5.51□□□□□ -1.53
SNHG1-215ENST00000540904 NDUFC2O95298 119 aa5.51□□□□□ -1.53
SNHG1-215ENST00000540904 SNRPEP62304 92 aaKnown RBP5.51□□□□□ -1.53
SNHG1-215ENST00000540904 SCGB1D4Q6XE38 83 aa5.51□□□□□ -1.53
SNHG1-215ENST00000540904 DDTP30046 118 aa5.5□□□□□ -1.53
SNHG1-215ENST00000540904 RPL13AP40429 203 aaKnown RBP5.5□□□□□ -1.53
SNHG1-215ENST00000540904 S100A12P80511 92 aa5.5□□□□□ -1.53
SNHG1-215ENST00000540904 S100A7L2Q5SY68 101 aa5.5□□□□□ -1.53
SNHG1-215ENST00000540904 LINC00308Q8TCZ7 52 aa5.5□□□□□ -1.53
SNHG1-215ENST00000540904 HIGD2AQ9BW72 106 aa5.5□□□□□ -1.53
SNHG1-215ENST00000540904 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
SNHG1-215ENST00000540904 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
SNHG1-215ENST00000540904 ANAPC11Q9NYG5 84 aa5.5□□□□□ -1.53
SNHG1-215ENST00000540904 ETDCA0A1B0GVM5 59 aa5.49□□□□□ -1.53
SNHG1-215ENST00000540904 PCP2Q8IVA1 136 aa5.49□□□□□ -1.53
SNHG1-215ENST00000540904 A0A087X002 238 aa5.48□□□□□ -1.53
SNHG1-215ENST00000540904 C5orf52A6NGY3 159 aa5.48□□□□□ -1.53
SNHG1-215ENST00000540904 CRYGAP11844 174 aa5.48□□□□□ -1.53
SNHG1-215ENST00000540904 SPRR1AP35321 89 aa5.48□□□□□ -1.53
SNHG1-215ENST00000540904 LINC00337Q8N6G1 96 aa5.48□□□□□ -1.53
SNHG1-215ENST00000540904 SPANXCQ9NY87 97 aa5.48□□□□□ -1.53
SNHG1-215ENST00000540904 HSBP1L1C9JCN9 74 aa5.47□□□□□ -1.53
SNHG1-215ENST00000540904 KRTAP4-16G5E9R7 235 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-215ENST00000540904 IGLV6-57P01721 117 aa5.47□□□□□ -1.53
SNHG1-215ENST00000540904 SPANXDQ9BXN6 97 aa5.47□□□□□ -1.53
SNHG1-215ENST00000540904 TRAV23DV6A0A075B6W5 121 aa5.46□□□□□ -1.54
SNHG1-215ENST00000540904 SCGB1D1O95968 90 aa5.46□□□□□ -1.54
SNHG1-215ENST00000540904 OR13C6PQ8NH95 151 aa5.46□□□□□ -1.54
SNHG1-215ENST00000540904 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
SNHG1-215ENST00000540904 B5MCH6 92 aa5.45□□□□□ -1.54
SNHG1-215ENST00000540904 FAM229BQ4G0N7 80 aa5.45□□□□□ -1.54
SNHG1-215ENST00000540904 SMCR5Q8TEV8 140 aa5.45□□□□□ -1.54
SNHG1-215ENST00000540904 ZNF73O43830 326 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-215ENST00000540904 SMIM6P0DI80 62 aa5.44□□□□□ -1.54
SNHG1-215ENST00000540904 IFITM1P13164 125 aa5.44□□□□□ -1.54
SNHG1-215ENST00000540904 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
SNHG1-215ENST00000540904 Q6ZRX8 168 aa5.44□□□□□ -1.54
SNHG1-215ENST00000540904 COPS9Q8WXC6 57 aa5.44□□□□□ -1.54
SNHG1-215ENST00000540904 SPRR4Q96PI1 79 aa5.44□□□□□ -1.54
SNHG1-215ENST00000540904 CBY1Q9Y3M2 126 aa5.44□□□□□ -1.54
SNHG1-215ENST00000540904 Q6ZVH6 145 aa5.43□□□□□ -1.54
SNHG1-215ENST00000540904 MUSTN1Q8IVN3 82 aa5.43□□□□□ -1.54
SNHG1-215ENST00000540904 LINC00518Q8N0U6 118 aa5.43□□□□□ -1.54
SNHG1-215ENST00000540904 Q9BRP9 147 aa5.43□□□□□ -1.54
SNHG1-215ENST00000540904 ZNF706Q9Y5V0 76 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-215ENST00000540904 TNXBP22105 4242 aa5.42□□□□□ -1.54
SNHG1-215ENST00000540904 ERC2-IT1O76042 136 aa5.42□□□□□ -1.54
SNHG1-215ENST00000540904 TSPAN13O95857 204 aa5.42□□□□□ -1.54
SNHG1-215ENST00000540904 HINT1P49773 126 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-215ENST00000540904 PPDPFQ9H3Y8 114 aa5.42□□□□□ -1.54
SNHG1-215ENST00000540904 JOSD1Q15040 202 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-215ENST00000540904 GAGE2AQ6NT46 116 aa5.41□□□□□ -1.54
SNHG1-215ENST00000540904 C3orf22Q8N5N4 141 aa5.41□□□□□ -1.54
SNHG1-215ENST00000540904 C12orf57Q99622 126 aa5.41□□□□□ -1.54
SNHG1-215ENST00000540904 A6NDN8 102 aa5.4□□□□□ -1.54
SNHG1-215ENST00000540904 C6orf99Q4VX62 202 aa5.39□□□□□ -1.55
SNHG1-215ENST00000540904 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
SNHG1-215ENST00000540904 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
SNHG1-215ENST00000540904 COX8AP10176 69 aa5.38□□□□□ -1.55
SNHG1-215ENST00000540904 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
SNHG1-215ENST00000540904 PAM16Q9Y3D7 125 aa5.38□□□□□ -1.55
SNHG1-215ENST00000540904 TRAV13-2A0A0B4J235 113 aa5.37□□□□□ -1.55
SNHG1-215ENST00000540904 COX7BP24311 80 aa5.37□□□□□ -1.55
SNHG1-215ENST00000540904 PRR4Q16378 134 aa5.37□□□□□ -1.55
SNHG1-215ENST00000540904 SPATA45Q537H7 98 aa5.37□□□□□ -1.55
SNHG1-215ENST00000540904 ST20-AS1Q8NBB2 130 aa5.37□□□□□ -1.55
SNHG1-215ENST00000540904 C14orf144Q96I85 54 aa5.37□□□□□ -1.55
SNHG1-215ENST00000540904 VAMP8Q9BV40 100 aa5.37□□□□□ -1.55
SNHG1-215ENST00000540904 HMCN2Q8NDA2 5059 aa5.36□□□□□ -1.55
SNHG1-215ENST00000540904 IGLV9-49A0A0B4J1Y8 123 aa5.36□□□□□ -1.55
SNHG1-215ENST00000540904 A4D1N5 150 aa5.36□□□□□ -1.55
SNHG1-215ENST00000540904 ELOF1P60002 83 aaKnown RBP5.36□□□□□ -1.55
SNHG1-215ENST00000540904 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
SNHG1-215ENST00000540904 HIST1H4GQ99525 98 aa5.36□□□□□ -1.55
SNHG1-215ENST00000540904 DHRS4-AS1Q9P1J3 65 aa5.36□□□□□ -1.55
SNHG1-215ENST00000540904 DLEU1O43261 78 aa5.35□□□□□ -1.55
SNHG1-215ENST00000540904 MOBPQ13875 183 aa5.35□□□□□ -1.55
SNHG1-215ENST00000540904 Q8NBF4 154 aa5.35□□□□□ -1.55
SNHG1-215ENST00000540904 SMIM11BQ8TCY0 68 aa5.35□□□□□ -1.55
SNHG1-215ENST00000540904 TRBV7-6A0A0J9YX20 115 aa5.34□□□□□ -1.55
SNHG1-215ENST00000540904 A0A1B0GWB2 263 aa5.33□□□□□ -1.56
SNHG1-215ENST00000540904 PCP4L1A6NKN8 68 aa5.33□□□□□ -1.56
SNHG1-215ENST00000540904 PYY3Q5JQD4 70 aa5.33□□□□□ -1.56
SNHG1-215ENST00000540904 SPAG11AQ6PDA7 123 aa5.33□□□□□ -1.56
SNHG1-215ENST00000540904 SLC25A34Q6PIV7 304 aa5.33□□□□□ -1.56
SNHG1-215ENST00000540904 RETNLBQ9BQ08 111 aa5.33□□□□□ -1.56
SNHG1-215ENST00000540904 C9orf153Q5TBE3 101 aa5.32□□□□□ -1.56
SNHG1-215ENST00000540904 DEFB105AQ8NG35 78 aa5.32□□□□□ -1.56
SNHG1-215ENST00000540904 TSTD3H0UI37 97 aa5.31□□□□□ -1.56
SNHG1-215ENST00000540904 CTAG1AP78358 180 aa5.31□□□□□ -1.56
SNHG1-215ENST00000540904 TAL2Q16559 108 aa5.31□□□□□ -1.56
SNHG1-215ENST00000540904 SSBP3-AS1Q7Z2R9 100 aa5.31□□□□□ -1.56
SNHG1-215ENST00000540904 SPRR1BP22528 89 aa5.3□□□□□ -1.56
SNHG1-215ENST00000540904 VAMP3Q15836 100 aa5.3□□□□□ -1.56
SNHG1-215ENST00000540904 C2orf91Q6ZV80 131 aa5.3□□□□□ -1.56
SNHG1-215ENST00000540904 HIGD1BQ9P298 99 aa5.3□□□□□ -1.56
SNHG1-215ENST00000540904 SPINK1P00995 79 aa5.29□□□□□ -1.56
SNHG1-215ENST00000540904 Q1RN00 199 aa5.29□□□□□ -1.56
SNHG1-215ENST00000540904 LAMTOR3Q9UHA4 124 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms