RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 M0R143 59 aa8.02□□□□□ -1.13
SNHG1-213ENST00000540725 HERV-K104P63124 156 aa8.02□□□□□ -1.13
SNHG1-213ENST00000540725 SMCR5Q8TEV8 140 aa8.02□□□□□ -1.13
SNHG1-213ENST00000540725 UQCR10Q9UDW1 63 aa8.02□□□□□ -1.13
SNHG1-213ENST00000540725 PAM16Q9Y3D7 125 aa8.02□□□□□ -1.13
SNHG1-213ENST00000540725 KRTAP4-16G5E9R7 235 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-213ENST00000540725 SPATA45Q537H7 98 aa8.01□□□□□ -1.13
SNHG1-213ENST00000540725 MAP1LC3CQ9BXW4 147 aa8.01□□□□□ -1.13
SNHG1-213ENST00000540725 TRBV10-3A0A0K0K1G6 114 aa8□□□□□ -1.13
SNHG1-213ENST00000540725 NDUFA12Q9UI09 145 aa8□□□□□ -1.13
SNHG1-213ENST00000540725 KRTAP13-3Q3SY46 172 aa7.99□□□□□ -1.13
SNHG1-213ENST00000540725 SNHG12Q9BXW3 62 aa7.99□□□□□ -1.13
SNHG1-213ENST00000540725 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
SNHG1-213ENST00000540725 LINC01545Q5VT33 79 aa7.98□□□□□ -1.13
SNHG1-213ENST00000540725 MYMXA0A1B0GTQ4 84 aa7.97□□□□□ -1.13
SNHG1-213ENST00000540725 SPINK1P00995 79 aa7.97□□□□□ -1.13
SNHG1-213ENST00000540725 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
SNHG1-213ENST00000540725 B5MCH6 92 aa7.96□□□□□ -1.14
SNHG1-213ENST00000540725 H0Y8G0 127 aa7.96□□□□□ -1.14
SNHG1-213ENST00000540725 TSPEAR-AS2P59090 65 aa7.96□□□□□ -1.14
SNHG1-213ENST00000540725 HSBP1L1C9JCN9 74 aa7.95□□□□□ -1.14
SNHG1-213ENST00000540725 ERC2-IT1O76042 136 aa7.95□□□□□ -1.14
SNHG1-213ENST00000540725 MOBPQ13875 183 aa7.95□□□□□ -1.14
SNHG1-213ENST00000540725 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
SNHG1-213ENST00000540725 IGLV9-49A0A0B4J1Y8 123 aa7.94□□□□□ -1.14
SNHG1-213ENST00000540725 LOC107984156A0A0G2JMH3 177 aa7.94□□□□□ -1.14
SNHG1-213ENST00000540725 ARL17AQ8IVW1 177 aa7.94□□□□□ -1.14
SNHG1-213ENST00000540725 PMCHL2Q9BQD1 86 aa7.94□□□□□ -1.14
SNHG1-213ENST00000540725 TRBV10-2A0A0K0K1G8 114 aa7.93□□□□□ -1.14
SNHG1-213ENST00000540725 A0A1B0GV90 55 aa7.93□□□□□ -1.14
SNHG1-213ENST00000540725 LEPROTO15243 131 aa7.93□□□□□ -1.14
SNHG1-213ENST00000540725 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
SNHG1-213ENST00000540725 Q6ZRX8 168 aa7.92□□□□□ -1.14
SNHG1-213ENST00000540725 SSBP3-AS1Q7Z2R9 100 aa7.92□□□□□ -1.14
SNHG1-213ENST00000540725 ATOH7Q8N100 152 aa7.92□□□□□ -1.14
SNHG1-213ENST00000540725 Q9BRP9 147 aa7.92□□□□□ -1.14
SNHG1-213ENST00000540725 COL5A1-AS1Q5SY13 56 aa7.91□□□□□ -1.14
SNHG1-213ENST00000540725 Q8N377 158 aa7.91□□□□□ -1.14
SNHG1-213ENST00000540725 SPANXB1Q9NS25 103 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-213ENST00000540725 J3QQQ9 107 aa7.9□□□□□ -1.14
SNHG1-213ENST00000540725 PLNP26678 52 aa7.9□□□□□ -1.14
SNHG1-213ENST00000540725 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.14
SNHG1-213ENST00000540725 KRTAP9-6A0A140TA67 174 aa7.89□□□□□ -1.15
SNHG1-213ENST00000540725 SLC25A34Q6PIV7 304 aa7.89□□□□□ -1.15
SNHG1-213ENST00000540725 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
SNHG1-213ENST00000540725 DLEU1O43261 78 aa7.88□□□□□ -1.15
SNHG1-213ENST00000540725 SLC25A20O43772 301 aa7.88□□□□□ -1.15
SNHG1-213ENST00000540725 IGLV6-57P01721 117 aa7.88□□□□□ -1.15
SNHG1-213ENST00000540725 COX8AP10176 69 aa7.88□□□□□ -1.15
SNHG1-213ENST00000540725 NMUP48645 174 aa7.88□□□□□ -1.15
SNHG1-213ENST00000540725 HERVK_113P61574 105 aa7.88□□□□□ -1.15
SNHG1-213ENST00000540725 S100A7L2Q5SY68 101 aa7.88□□□□□ -1.15
SNHG1-213ENST00000540725 DPM2O94777 84 aa7.87□□□□□ -1.15
SNHG1-213ENST00000540725 NDUFC2O95298 119 aa7.87□□□□□ -1.15
SNHG1-213ENST00000540725 LGALS3P17931 250 aaKnown RBP7.87□□□□□ -1.15
SNHG1-213ENST00000540725 TRAV23DV6A0A075B6W5 121 aa7.86□□□□□ -1.15
SNHG1-213ENST00000540725 LINC01547P58512 204 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-213ENST00000540725 C9orf153Q5TBE3 101 aa7.85□□□□□ -1.15
SNHG1-213ENST00000540725 IGKCP01834 107 aa7.84□□□□□ -1.15
SNHG1-213ENST00000540725 NPC2P61916 151 aa7.84□□□□□ -1.15
SNHG1-213ENST00000540725 SOSTDC1Q6X4U4 206 aa7.84□□□□□ -1.15
SNHG1-213ENST00000540725 ZNF73O43830 326 aaPredicted RBP7.84□□□□□ -1.16
SNHG1-213ENST00000540725 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.16
SNHG1-213ENST00000540725 XP32Q5T750 250 aa7.84□□□□□ -1.16
SNHG1-213ENST00000540725 ST20-AS1Q8NBB2 130 aa7.83□□□□□ -1.16
SNHG1-213ENST00000540725 A0A0J9YXY3 114 aa7.82□□□□□ -1.16
SNHG1-213ENST00000540725 ADAMTSL4-AS1Q5T5F5 129 aa7.82□□□□□ -1.16
SNHG1-213ENST00000540725 HINT1P49773 126 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-213ENST00000540725 BATFQ16520 125 aa7.81□□□□□ -1.16
SNHG1-213ENST00000540725 ANKRD39Q53RE8 183 aa7.81□□□□□ -1.16
SNHG1-213ENST00000540725 BVES-AS1Q5T3Y7 98 aa7.81□□□□□ -1.16
SNHG1-213ENST00000540725 C2orf91Q6ZV80 131 aa7.8□□□□□ -1.16
SNHG1-213ENST00000540725 HIGD1BQ9P298 99 aa7.8□□□□□ -1.16
SNHG1-213ENST00000540725 CBY1Q9Y3M2 126 aa7.79□□□□□ -1.16
SNHG1-213ENST00000540725 E9PLD3 99 aa7.78□□□□□ -1.16
SNHG1-213ENST00000540725 HSD52Q0P140 79 aa7.77□□□□□ -1.17
SNHG1-213ENST00000540725 SPRR1BP22528 89 aa7.76□□□□□ -1.17
SNHG1-213ENST00000540725 SPANXCQ9NY87 97 aa7.76□□□□□ -1.17
SNHG1-213ENST00000540725 OR13C6PQ8NH95 151 aa7.75□□□□□ -1.17
SNHG1-213ENST00000540725 LINC00308Q8TCZ7 52 aa7.75□□□□□ -1.17
SNHG1-213ENST00000540725 LITAFQ99732 161 aa7.75□□□□□ -1.17
SNHG1-213ENST00000540725 LIMD2Q9BT23 127 aa7.75□□□□□ -1.17
SNHG1-213ENST00000540725 HRCT1Q6UXD1 115 aa7.74□□□□□ -1.17
SNHG1-213ENST00000540725 DHRS4-AS1Q9P1J3 65 aa7.74□□□□□ -1.17
SNHG1-213ENST00000540725 A6NDN8 102 aa7.73□□□□□ -1.17
SNHG1-213ENST00000540725 TAX1BP3O14907 124 aa7.73□□□□□ -1.17
SNHG1-213ENST00000540725 TAL2Q16559 108 aa7.73□□□□□ -1.17
SNHG1-213ENST00000540725 TIMM17BO60830 172 aa7.72□□□□□ -1.17
SNHG1-213ENST00000540725 UBE2V1Q13404 147 aa7.72□□□□□ -1.17
SNHG1-213ENST00000540725 LCE2CQ5TA81 110 aa7.72□□□□□ -1.17
SNHG1-213ENST00000540725 PCP2Q8IVA1 136 aa7.72□□□□□ -1.17
SNHG1-213ENST00000540725 SPANXDQ9BXN6 97 aa7.72□□□□□ -1.17
SNHG1-213ENST00000540725 LAMTOR3Q9UHA4 124 aa7.72□□□□□ -1.17
SNHG1-213ENST00000540725 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
SNHG1-213ENST00000540725 ZNF815PA8K554 130 aa7.7□□□□□ -1.18
SNHG1-213ENST00000540725 COX7BP24311 80 aa7.7□□□□□ -1.18
SNHG1-213ENST00000540725 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
SNHG1-213ENST00000540725 PCOTHQ58A44 107 aa7.7□□□□□ -1.18
SNHG1-213ENST00000540725 KRTAP19-2Q3LHN2 52 aa7.69□□□□□ -1.18
SNHG1-213ENST00000540725 C6orf99Q4VX62 202 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms