RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 CDIP1Q9H305 208 aa11.97□□□□□ -0.49
CHFR-217ENST00000540537 TRAV23DV6A0A075B6W5 121 aa11.96□□□□□ -0.49
CHFR-217ENST00000540537 A0A0U1RQV1 116 aa11.96□□□□□ -0.49
CHFR-217ENST00000540537 EIF4EBP3O60516 100 aaPredicted RBP11.96□□□□□ -0.49
CHFR-217ENST00000540537 NPC2P61916 151 aa11.96□□□□□ -0.49
CHFR-217ENST00000540537 LINC01545Q5VT33 79 aa11.96□□□□□ -0.49
CHFR-217ENST00000540537 FP248Q71RG6 208 aaPredicted RBP11.95□□□□□ -0.5
CHFR-217ENST00000540537 MUC17Q685J3 4493 aa11.95□□□□□ -0.5
CHFR-217ENST00000540537 SPINK1P00995 79 aa11.94□□□□□ -0.5
CHFR-217ENST00000540537 JOSD1Q15040 202 aaPredicted RBP11.94□□□□□ -0.5
CHFR-217ENST00000540537 PET117Q6UWS5 81 aa11.94□□□□□ -0.5
CHFR-217ENST00000540537 ZNF73O43830 326 aaPredicted RBP11.93□□□□□ -0.5
CHFR-217ENST00000540537 TIMM17BO60830 172 aa11.92□□□□□ -0.5
CHFR-217ENST00000540537 LITAFQ99732 161 aa11.92□□□□□ -0.5
CHFR-217ENST00000540537 CBY1Q9Y3M2 126 aa11.92□□□□□ -0.5
CHFR-217ENST00000540537 IGLV9-49A0A0B4J1Y8 123 aa11.91□□□□□ -0.5
CHFR-217ENST00000540537 MOBPQ13875 183 aa11.91□□□□□ -0.5
CHFR-217ENST00000540537 SSBP3-AS1Q7Z2R9 100 aa11.91□□□□□ -0.5
CHFR-217ENST00000540537 LINC00308Q8TCZ7 52 aa11.9□□□□□ -0.5
CHFR-217ENST00000540537 SPANXCQ9NY87 97 aa11.9□□□□□ -0.5
CHFR-217ENST00000540537 ZNF815PA8K554 130 aa11.87□□□□□ -0.51
CHFR-217ENST00000540537 C3orf79P0CE67 100 aa11.87□□□□□ -0.51
CHFR-217ENST00000540537 RPS29P62273 56 aaKnown RBP11.87□□□□□ -0.51
CHFR-217ENST00000540537 C5orf52A6NGY3 159 aa11.86□□□□□ -0.51
CHFR-217ENST00000540537 HINT1P49773 126 aaPredicted RBP11.86□□□□□ -0.51
CHFR-217ENST00000540537 COA6Q5JTJ3 125 aaKnown RBP11.86□□□□□ -0.51
CHFR-217ENST00000540537 OR13C6PQ8NH95 151 aa11.84□□□□□ -0.51
CHFR-217ENST00000540537 TTTY13Q9BZ97 58 aa11.84□□□□□ -0.51
CHFR-217ENST00000540537 SPANXDQ9BXN6 97 aa11.83□□□□□ -0.52
CHFR-217ENST00000540537 FAT4Q6V0I7 4981 aa11.83□□□□□ -0.52
CHFR-217ENST00000540537 KRTAP13-3Q3SY46 172 aa11.82□□□□□ -0.52
CHFR-217ENST00000540537 ST20-AS1Q8NBB2 130 aa11.82□□□□□ -0.52
CHFR-217ENST00000540537 KRTDAPP60985 99 aa11.81□□□□□ -0.52
CHFR-217ENST00000540537 C9orf153Q5TBE3 101 aa11.81□□□□□ -0.52
CHFR-217ENST00000540537 Q8N377 158 aa11.81□□□□□ -0.52
CHFR-217ENST00000540537 LINC00518Q8N0U6 118 aa11.8□□□□□ -0.52
CHFR-217ENST00000540537 DHRS4-AS1Q9P1J3 65 aa11.79□□□□□ -0.52
CHFR-217ENST00000540537 C20orf202A1L168 122 aa11.78□□□□□ -0.52
CHFR-217ENST00000540537 SLC25A20O43772 301 aa11.78□□□□□ -0.52
CHFR-217ENST00000540537 SPRR1BP22528 89 aa11.77□□□□□ -0.53
CHFR-217ENST00000540537 SLC25A34Q6PIV7 304 aa11.75□□□□□ -0.53
CHFR-217ENST00000540537 SCGB1D4Q6XE38 83 aa11.75□□□□□ -0.53
CHFR-217ENST00000540537 COX7BP24311 80 aa11.74□□□□□ -0.53
CHFR-217ENST00000540537 ELOF1P60002 83 aaKnown RBP11.74□□□□□ -0.53
CHFR-217ENST00000540537 COPS9Q8WXC6 57 aa11.74□□□□□ -0.53
CHFR-217ENST00000540537 ANKRD39Q53RE8 183 aa11.73□□□□□ -0.53
CHFR-217ENST00000540537 IFITM1P13164 125 aa11.72□□□□□ -0.53
CHFR-217ENST00000540537 AKR1D1P51857 326 aa11.72□□□□□ -0.53
CHFR-217ENST00000540537 C6orf99Q4VX62 202 aa11.72□□□□□ -0.53
CHFR-217ENST00000540537 LCE2AQ5TA79 106 aaPredicted RBP11.71□□□□□ -0.53
CHFR-217ENST00000540537 ASB16-AS1Q495Z4 193 aa11.7□□□□□ -0.54
CHFR-217ENST00000540537 Q6ZVH6 145 aa11.7□□□□□ -0.54
CHFR-217ENST00000540537 TRBV7-6A0A0J9YX20 115 aa11.69□□□□□ -0.54
CHFR-217ENST00000540537 ATOH7Q8N100 152 aa11.69□□□□□ -0.54
CHFR-217ENST00000540537 LAMTOR3Q9UHA4 124 aa11.69□□□□□ -0.54
CHFR-217ENST00000540537 PCP2Q8IVA1 136 aa11.66□□□□□ -0.54
CHFR-217ENST00000540537 SEC61BP60468 96 aaKnown RBP11.65□□□□□ -0.54
CHFR-217ENST00000540537 A0A1B0GWB2 263 aa11.64□□□□□ -0.55
CHFR-217ENST00000540537 SNRPEP62304 92 aaKnown RBP11.64□□□□□ -0.55
CHFR-217ENST00000540537 TAL2Q16559 108 aa11.64□□□□□ -0.55
CHFR-217ENST00000540537 MUSTN1Q8IVN3 82 aa11.64□□□□□ -0.55
CHFR-217ENST00000540537 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
CHFR-217ENST00000540537 A6NDN8 102 aa11.63□□□□□ -0.55
CHFR-217ENST00000540537 TEX49A0A1B0GTD5 131 aa11.62□□□□□ -0.55
CHFR-217ENST00000540537 XP32Q5T750 250 aa11.61□□□□□ -0.55
CHFR-217ENST00000540537 HRCT1Q6UXD1 115 aa11.61□□□□□ -0.55
CHFR-217ENST00000540537 DEFB105AQ8NG35 78 aa11.61□□□□□ -0.55
CHFR-217ENST00000540537 Q1RN00 199 aa11.6□□□□□ -0.55
CHFR-217ENST00000540537 TRAV13-2A0A0B4J235 113 aa11.59□□□□□ -0.55
CHFR-217ENST00000540537 A4D1N5 150 aa11.58□□□□□ -0.56
CHFR-217ENST00000540537 CD164Q04900 197 aa11.58□□□□□ -0.56
CHFR-217ENST00000540537 PRO1933Q9H354 126 aa11.58□□□□□ -0.56
CHFR-217ENST00000540537 IGLV5-48A0A075B6I7 105 aa11.57□□□□□ -0.56
CHFR-217ENST00000540537 HIST3H2BBQ8N257 126 aa11.57□□□□□ -0.56
CHFR-217ENST00000540537 LINC01547P58512 204 aaPredicted RBP11.56□□□□□ -0.56
CHFR-217ENST00000540537 SMIM29Q86T20 159 aa11.56□□□□□ -0.56
CHFR-217ENST00000540537 HIST1H2BLQ99880 126 aa11.56□□□□□ -0.56
CHFR-217ENST00000540537 S100A2P29034 98 aa11.55□□□□□ -0.56
CHFR-217ENST00000540537 KRTAP4-1Q9BYQ7 146 aa11.55□□□□□ -0.56
CHFR-217ENST00000540537 SMIM11BQ8TCY0 68 aa11.54□□□□□ -0.56
CHFR-217ENST00000540537 NHP2Q9NX24 153 aaKnown RBP11.54□□□□□ -0.56
CHFR-217ENST00000540537 H7C2G1 150 aa11.52□□□□□ -0.57
CHFR-217ENST00000540537 HSBP1L1C9JCN9 74 aa11.51□□□□□ -0.57
CHFR-217ENST00000540537 Q5XG85 94 aa11.5□□□□□ -0.57
CHFR-217ENST00000540537 KRTAP9-2Q9BYQ4 174 aa11.49□□□□□ -0.57
CHFR-217ENST00000540537 S100A1P23297 94 aa11.47□□□□□ -0.57
CHFR-217ENST00000540537 S100A6P06703 90 aa11.46□□□□□ -0.57
CHFR-217ENST00000540537 VAMP3Q15836 100 aa11.46□□□□□ -0.57
CHFR-217ENST00000540537 C9orf92A6NGG3 77 aa11.44□□□□□ -0.58
CHFR-217ENST00000540537 LINC00575Q6W349 94 aa11.43□□□□□ -0.58
CHFR-217ENST00000540537 A0A0G2JQZ4 141 aa11.42□□□□□ -0.58
CHFR-217ENST00000540537 C1orf195Q5TG92 126 aa11.41□□□□□ -0.58
CHFR-217ENST00000540537 hADV29S1A0JD25 119 aa11.39□□□□□ -0.59
CHFR-217ENST00000540537 F8WEM9 126 aa11.39□□□□□ -0.59
CHFR-217ENST00000540537 SCGB1D1O95968 90 aa11.37□□□□□ -0.59
CHFR-217ENST00000540537 PCOTHQ58A44 107 aa11.37□□□□□ -0.59
CHFR-217ENST00000540537 Q6ZQY7 126 aa11.37□□□□□ -0.59
CHFR-217ENST00000540537 TCL1BO95988 128 aa11.35□□□□□ -0.59
CHFR-217ENST00000540537 HIST1H4GQ99525 98 aa11.35□□□□□ -0.59
CHFR-217ENST00000540537 COX8AP10176 69 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms