RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 LCE2BO14633 110 aa6.38□□□□□ -1.39
CTNNA1-243ENST00000540387 SPTSSBQ8NFR3 76 aa6.38□□□□□ -1.39
CTNNA1-243ENST00000540387 PKD1L1Q8TDX9 2849 aa6.38□□□□□ -1.39
CTNNA1-243ENST00000540387 H3BQ85 93 aa6.38□□□□□ -1.39
CTNNA1-243ENST00000540387 UBE2AP49459 152 aa6.38□□□□□ -1.39
CTNNA1-243ENST00000540387 PRR4Q16378 134 aa6.38□□□□□ -1.39
CTNNA1-243ENST00000540387 TRBV6-8A0A0A6YYG3 113 aa6.37□□□□□ -1.39
CTNNA1-243ENST00000540387 NDUFS5O43920 106 aa6.37□□□□□ -1.39
CTNNA1-243ENST00000540387 C10orf25Q5T742 122 aa6.37□□□□□ -1.39
CTNNA1-243ENST00000540387 ZCCHC13Q8WW36 166 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-243ENST00000540387 CYP4F30PQ9H0H9 118 aa6.37□□□□□ -1.39
CTNNA1-243ENST00000540387 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-243ENST00000540387 SMIM29Q86T20 159 aa6.37□□□□□ -1.39
CTNNA1-243ENST00000540387 Q8IZM0 81 aa6.37□□□□□ -1.39
CTNNA1-243ENST00000540387 TRGV2A0A075B6R0 118 aa6.36□□□□□ -1.39
CTNNA1-243ENST00000540387 CHKB-CPT1BH3BT56 60 aa6.36□□□□□ -1.39
CTNNA1-243ENST00000540387 PRB2P02812 416 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-243ENST00000540387 COX7BP24311 80 aa6.36□□□□□ -1.39
CTNNA1-243ENST00000540387 ODF3L2Q3SX64 289 aa6.36□□□□□ -1.39
CTNNA1-243ENST00000540387 MAP6D1Q9H9H5 199 aa6.36□□□□□ -1.39
CTNNA1-243ENST00000540387 LOC100131303A0A0U1RQF7 123 aa6.35□□□□□ -1.39
CTNNA1-243ENST00000540387 LINC00959A0A1B0GUT2 108 aa6.35□□□□□ -1.39
CTNNA1-243ENST00000540387 ZNF73O43830 326 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-243ENST00000540387 PHF5AQ7RTV0 110 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-243ENST00000540387 A6NN06 94 aa6.34□□□□□ -1.39
CTNNA1-243ENST00000540387 HCG22E2RYF7 251 aa6.34□□□□□ -1.39
CTNNA1-243ENST00000540387 INSP01308 110 aa6.34□□□□□ -1.39
CTNNA1-243ENST00000540387 WFDC10AQ9H1F0 79 aa6.34□□□□□ -1.39
CTNNA1-243ENST00000540387 C9orf116Q5BN46 136 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-243ENST00000540387 ATP11AUNQ6ZP68 121 aa6.34□□□□□ -1.39
CTNNA1-243ENST00000540387 COX17Q14061 63 aa6.33□□□□□ -1.4
CTNNA1-243ENST00000540387 C19orf73Q9NVV2 129 aa6.33□□□□□ -1.4
CTNNA1-243ENST00000540387 ANK2Q01484 3957 aa6.33□□□□□ -1.4
CTNNA1-243ENST00000540387 TRGV4A0A0C4DH28 118 aa6.32□□□□□ -1.4
CTNNA1-243ENST00000540387 LCA10Q71F78 164 aa6.32□□□□□ -1.4
CTNNA1-243ENST00000540387 KLK12Q9UKR0 248 aa6.32□□□□□ -1.4
CTNNA1-243ENST00000540387 MGAM2Q2M2H8 2515 aa6.32□□□□□ -1.4
CTNNA1-243ENST00000540387 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
CTNNA1-243ENST00000540387 DIRC1Q969H9 104 aa6.32□□□□□ -1.4
CTNNA1-243ENST00000540387 IGLV6-57P01721 117 aa6.32□□□□□ -1.4
CTNNA1-243ENST00000540387 NOTCH1P46531 2555 aa6.31□□□□□ -1.4
CTNNA1-243ENST00000540387 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-243ENST00000540387 CMYA5Q8N3K9 4069 aa6.31□□□□□ -1.4
CTNNA1-243ENST00000540387 KIAA0087Q14695 138 aa6.31□□□□□ -1.4
CTNNA1-243ENST00000540387 C3orf84H3BNL1 204 aa6.3□□□□□ -1.4
CTNNA1-243ENST00000540387 CMC4P56277 68 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-243ENST00000540387 Q8N9P0 234 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-243ENST00000540387 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
CTNNA1-243ENST00000540387 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
CTNNA1-243ENST00000540387 KRTAP10-11P60412 298 aa6.29□□□□□ -1.4
CTNNA1-243ENST00000540387 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
CTNNA1-243ENST00000540387 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
CTNNA1-243ENST00000540387 LIMD2Q9BT23 127 aa6.29□□□□□ -1.4
CTNNA1-243ENST00000540387 ETDCA0A1B0GVM5 59 aa6.29□□□□□ -1.4
CTNNA1-243ENST00000540387 CLPSL2Q6UWE3 100 aa6.29□□□□□ -1.4
CTNNA1-243ENST00000540387 NBEAL1Q6ZS30 2694 aa6.28□□□□□ -1.4
CTNNA1-243ENST00000540387 IGHV4-30-4P0DP06 118 aa6.28□□□□□ -1.4
CTNNA1-243ENST00000540387 ST20-AS1Q8NBB2 130 aa6.28□□□□□ -1.4
CTNNA1-243ENST00000540387 IGHV4-28A0A0C4DH34 117 aa6.28□□□□□ -1.4
CTNNA1-243ENST00000540387 NOP10Q9NPE3 64 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-243ENST00000540387 A6NED7 52 aa6.26□□□□□ -1.41
CTNNA1-243ENST00000540387 EGFEM1PQ0D2K5 195 aa6.26□□□□□ -1.41
CTNNA1-243ENST00000540387 B9D2Q9BPU9 175 aa6.26□□□□□ -1.41
CTNNA1-243ENST00000540387 NBEAL2Q6ZNJ1 2754 aa6.26□□□□□ -1.41
CTNNA1-243ENST00000540387 GIG44P09565 113 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-243ENST00000540387 Q75L30 129 aa6.25□□□□□ -1.41
CTNNA1-243ENST00000540387 NDUFB1O75438 58 aa6.25□□□□□ -1.41
CTNNA1-243ENST00000540387 VPREB1P12018 145 aa6.24□□□□□ -1.41
CTNNA1-243ENST00000540387 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-243ENST00000540387 DNHD1Q96M86 4753 aa6.24□□□□□ -1.41
CTNNA1-243ENST00000540387 LINC00208Q96KT6 92 aa6.23□□□□□ -1.41
CTNNA1-243ENST00000540387 CDC42SE1Q9NRR8 79 aa6.23□□□□□ -1.41
CTNNA1-243ENST00000540387 CSNK1G2-AS1Q8NCQ2 148 aa6.22□□□□□ -1.41
CTNNA1-243ENST00000540387 UNQ6190/PRO20217Q6UXQ8 127 aa6.22□□□□□ -1.41
CTNNA1-243ENST00000540387 LOC101927531A0A1B0GV80 90 aa6.21□□□□□ -1.42
CTNNA1-243ENST00000540387 MOBPQ13875 183 aa6.21□□□□□ -1.42
CTNNA1-243ENST00000540387 KRTAP21-3Q3LHN1 58 aa6.21□□□□□ -1.42
CTNNA1-243ENST00000540387 DNAH3Q8TD57 4116 aa6.21□□□□□ -1.42
CTNNA1-243ENST00000540387 A0A1B0GUV1 79 aa6.21□□□□□ -1.42
CTNNA1-243ENST00000540387 IGLV10-54A0A075B6I4 117 aa6.2□□□□□ -1.42
CTNNA1-243ENST00000540387 CHCHD10Q8WYQ3 142 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-243ENST00000540387 Q9BRP9 147 aa6.2□□□□□ -1.42
CTNNA1-243ENST00000540387 DSCR10P59022 87 aa6.19□□□□□ -1.42
CTNNA1-243ENST00000540387 DEFB135Q30KP9 77 aa6.19□□□□□ -1.42
CTNNA1-243ENST00000540387 K7EQZ3 153 aa6.19□□□□□ -1.42
CTNNA1-243ENST00000540387 SERTAD4-AS1Q5TG53 156 aa6.19□□□□□ -1.42
CTNNA1-243ENST00000540387 KPRPQ5T749 579 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-243ENST00000540387 LINC00528Q8N1L1 170 aa6.18□□□□□ -1.42
CTNNA1-243ENST00000540387 NKAPP1Q8N9T2 125 aa6.18□□□□□ -1.42
CTNNA1-243ENST00000540387 K7EIL1 84 aa6.18□□□□□ -1.42
CTNNA1-243ENST00000540387 XAGE1AQ9HD64 81 aa6.18□□□□□ -1.42
CTNNA1-243ENST00000540387 SPANXA2-OT1Q8N9U9 137 aa6.17□□□□□ -1.42
CTNNA1-243ENST00000540387 A0A0J9YWU9 116 aa6.17□□□□□ -1.42
CTNNA1-243ENST00000540387 MP68P56378 58 aa6.17□□□□□ -1.42
CTNNA1-243ENST00000540387 SPAG11BQ08648 103 aa6.17□□□□□ -1.42
CTNNA1-243ENST00000540387 KCNQ1DNQ9H478 68 aa6.17□□□□□ -1.42
CTNNA1-243ENST00000540387 A0A1W2PNM2 257 aa6.16□□□□□ -1.42
CTNNA1-243ENST00000540387 C16orf74Q96GX8 76 aa6.16□□□□□ -1.42
CTNNA1-243ENST00000540387 X6R8D5 127 aa6.16□□□□□ -1.42
CTNNA1-243ENST00000540387 IGLV5-48A0A075B6I7 105 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms