RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 COL7A1Q02388 2944 aa8.97□□□□□ -0.97
BNIP3-202ENST00000540159 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
BNIP3-202ENST00000540159 EGFEM1PQ0D2K5 195 aa8.97□□□□□ -0.97
BNIP3-202ENST00000540159 TRAV10A0A0B4J240 114 aa8.96□□□□□ -0.97
BNIP3-202ENST00000540159 NKAPP1Q8N9T2 125 aa8.96□□□□□ -0.97
BNIP3-202ENST00000540159 M0R378 163 aa8.96□□□□□ -0.98
BNIP3-202ENST00000540159 CRYGAP11844 174 aa8.94□□□□□ -0.98
BNIP3-202ENST00000540159 SNURFQ9Y675 71 aa8.94□□□□□ -0.98
BNIP3-202ENST00000540159 WIPF1O43516 503 aa8.92□□□□□ -0.98
BNIP3-202ENST00000540159 FAM19A5Q7Z5A7 132 aaPredicted RBP8.92□□□□□ -0.98
BNIP3-202ENST00000540159 C7orf33Q8WU49 177 aa8.92□□□□□ -0.98
BNIP3-202ENST00000540159 LINC00528Q8N1L1 170 aa8.91□□□□□ -0.98
BNIP3-202ENST00000540159 LOC110117498A0A087WWA1 95 aa8.91□□□□□ -0.98
BNIP3-202ENST00000540159 LINC00588Q9Y4M8 146 aa8.91□□□□□ -0.98
BNIP3-202ENST00000540159 LINC01556Q5JQF7 62 aa8.91□□□□□ -0.98
BNIP3-202ENST00000540159 A0A0G2JQZ4 141 aa8.9□□□□□ -0.98
BNIP3-202ENST00000540159 A0A1W2PNN7 141 aa8.9□□□□□ -0.98
BNIP3-202ENST00000540159 ST20-AS1Q8NBB2 130 aa8.9□□□□□ -0.98
BNIP3-202ENST00000540159 TRBV7-4A0A0J9YYF1 115 aa8.88□□□□□ -0.99
BNIP3-202ENST00000540159 BPY2O14599 106 aa8.88□□□□□ -0.99
BNIP3-202ENST00000540159 ATP5EP2Q5VTU8 51 aa8.88□□□□□ -0.99
BNIP3-202ENST00000540159 IGKV2-24A0A0C4DH68 120 aa8.88□□□□□ -0.99
BNIP3-202ENST00000540159 H3BNG1 76 aa8.87□□□□□ -0.99
BNIP3-202ENST00000540159 TM2D3Q9BRN9 247 aa8.86□□□□□ -0.99
BNIP3-202ENST00000540159 HUWE1Q7Z6Z7 4374 aaKnown RBP8.86□□□□□ -0.99
BNIP3-202ENST00000540159 RMI2Q96E14 147 aa8.86□□□□□ -0.99
BNIP3-202ENST00000540159 OXTP01178 125 aa8.85□□□□□ -0.99
BNIP3-202ENST00000540159 Q8N377 158 aa8.84□□□□□ -0.99
BNIP3-202ENST00000540159 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.84□□□□□ -0.99
BNIP3-202ENST00000540159 ERC2-IT1O76042 136 aa8.84□□□□□ -0.99
BNIP3-202ENST00000540159 Q9BRP9 147 aa8.84□□□□□ -0.99
BNIP3-202ENST00000540159 J3KT08 172 aa8.83□□□□□ -1
BNIP3-202ENST00000540159 UBE2BP63146 152 aa8.83□□□□□ -1
BNIP3-202ENST00000540159 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
BNIP3-202ENST00000540159 NREPQ16612 68 aa8.83□□□□□ -1
BNIP3-202ENST00000540159 DPH3Q96FX2 82 aa8.83□□□□□ -1
BNIP3-202ENST00000540159 KRTAP7-1Q8IUC3 87 aa8.82□□□□□ -1
BNIP3-202ENST00000540159 DNAH10OSP0CZ25 163 aa8.82□□□□□ -1
BNIP3-202ENST00000540159 PDE6GP18545 87 aa8.81□□□□□ -1
BNIP3-202ENST00000540159 DNAH9Q9NYC9 4486 aa8.8□□□□□ -1
BNIP3-202ENST00000540159 TMEM258P61165 79 aa8.8□□□□□ -1
BNIP3-202ENST00000540159 KCNQ1DNQ9H478 68 aa8.79□□□□□ -1
BNIP3-202ENST00000540159 DNAH7Q8WXX0 4024 aa8.79□□□□□ -1
BNIP3-202ENST00000540159 DEFB116Q30KQ4 102 aa8.79□□□□□ -1
BNIP3-202ENST00000540159 K7EIL1 84 aa8.79□□□□□ -1
BNIP3-202ENST00000540159 PRLHP81277 87 aa8.78□□□□□ -1
BNIP3-202ENST00000540159 TRBV7-6A0A0J9YX20 115 aa8.78□□□□□ -1
BNIP3-202ENST00000540159 Q6ZRX8 168 aa8.78□□□□□ -1
BNIP3-202ENST00000540159 CXCL6P80162 114 aa8.77□□□□□ -1
BNIP3-202ENST00000540159 KRTAP1-5Q9BYS1 174 aa8.77□□□□□ -1
BNIP3-202ENST00000540159 DNAH3Q8TD57 4116 aa8.77□□□□□ -1.01
BNIP3-202ENST00000540159 TRAV7A0A075B6U4 112 aa8.77□□□□□ -1.01
BNIP3-202ENST00000540159 F8WEM9 126 aa8.77□□□□□ -1.01
BNIP3-202ENST00000540159 IGLV1-50A0A075B6I6 118 aa8.76□□□□□ -1.01
BNIP3-202ENST00000540159 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
BNIP3-202ENST00000540159 PSCAO43653 123 aa8.75□□□□□ -1.01
BNIP3-202ENST00000540159 CHTF8P0CG12 524 aa8.75□□□□□ -1.01
BNIP3-202ENST00000540159 HIGD2AQ9BW72 106 aa8.75□□□□□ -1.01
BNIP3-202ENST00000540159 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
BNIP3-202ENST00000540159 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
BNIP3-202ENST00000540159 H7BZZ5 65 aa8.74□□□□□ -1.01
BNIP3-202ENST00000540159 IGKV4-1P06312 121 aa8.74□□□□□ -1.01
BNIP3-202ENST00000540159 DNAH1Q9P2D7 4330 aa8.73□□□□□ -1.01
BNIP3-202ENST00000540159 C4orf26Q17RF5 130 aa8.73□□□□□ -1.01
BNIP3-202ENST00000540159 A0A096LNI7 61 aa8.73□□□□□ -1.01
BNIP3-202ENST00000540159 FAM236DA0A1B0GTK5 79 aa8.73□□□□□ -1.01
BNIP3-202ENST00000540159 FAM236CP0DP71 79 aa8.73□□□□□ -1.01
BNIP3-202ENST00000540159 H3BQ85 93 aa8.72□□□□□ -1.01
BNIP3-202ENST00000540159 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.018e-9■■■■■ 30
BNIP3-202ENST00000540159 FAM30AQ9NZY2 134 aa8.72□□□□□ -1.01
BNIP3-202ENST00000540159 UBE2DNLQ8IWF7 75 aa8.71□□□□□ -1.02
BNIP3-202ENST00000540159 KRTAP4-16G5E9R7 235 aaPredicted RBP8.7□□□□□ -1.02
BNIP3-202ENST00000540159 DHRS4-AS1Q9P1J3 65 aa8.69□□□□□ -1.02
BNIP3-202ENST00000540159 SMIM29Q86T20 159 aa8.69□□□□□ -1.02
BNIP3-202ENST00000540159 REG3GQ6UW15 175 aa8.69□□□□□ -1.02
BNIP3-202ENST00000540159 HRCT1Q6UXD1 115 aa8.69□□□□□ -1.02
BNIP3-202ENST00000540159 PRYO14603 147 aa8.67□□□□□ -1.02
BNIP3-202ENST00000540159 TLX1NBP0CAT3 122 aa8.67□□□□□ -1.02
BNIP3-202ENST00000540159 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
BNIP3-202ENST00000540159 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
BNIP3-202ENST00000540159 TGP01266 2768 aa8.67□□□□□ -1.02
BNIP3-202ENST00000540159 PHF5AQ7RTV0 110 aaKnown RBP8.66□□□□□ -1.02
BNIP3-202ENST00000540159 KRTAP11-1Q8IUC1 163 aa8.66□□□□□ -1.02
BNIP3-202ENST00000540159 K7EQZ3 153 aa8.65□□□□□ -1.02
BNIP3-202ENST00000540159 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.02
BNIP3-202ENST00000540159 KLKP1Q107X0 134 aa8.65□□□□□ -1.03
BNIP3-202ENST00000540159 SPRR1AP35321 89 aa8.64□□□□□ -1.03
BNIP3-202ENST00000540159 PLECQ15149 4684 aaKnown RBP8.64□□□□□ -1.03
BNIP3-202ENST00000540159 RPS28P62857 69 aaKnown RBP8.64□□□□□ -1.03
BNIP3-202ENST00000540159 Q8NBF4 154 aa8.63□□□□□ -1.03
BNIP3-202ENST00000540159 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
BNIP3-202ENST00000540159 A0A087WSZ3 146 aa8.62□□□□□ -1.03
BNIP3-202ENST00000540159 F8WDY8 70 aa8.62□□□□□ -1.03
BNIP3-202ENST00000540159 TNP2Q05952 138 aa8.62□□□□□ -1.03
BNIP3-202ENST00000540159 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
BNIP3-202ENST00000540159 LINC00474Q9P2X8 69 aa8.61□□□□□ -1.03
BNIP3-202ENST00000540159 PRR4Q16378 134 aa8.61□□□□□ -1.03
BNIP3-202ENST00000540159 PLA2G2DQ9UNK4 145 aa8.61□□□□□ -1.03
BNIP3-202ENST00000540159 Q5XG85 94 aa8.6□□□□□ -1.03
BNIP3-202ENST00000540159 OCR1Q9BZK8 76 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms