RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 Q6ZSA8 131 aa6.74□□□□□ -1.33
LEMD3-202ENST00000539442 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
LEMD3-202ENST00000539442 C22orf24Q9Y442 160 aa6.74□□□□□ -1.33
LEMD3-202ENST00000539442 RYR3Q15413 4870 aa6.74□□□□□ -1.33
LEMD3-202ENST00000539442 TAX1BP3O14907 124 aa6.73□□□□□ -1.33
LEMD3-202ENST00000539442 TSPAN13O95857 204 aa6.73□□□□□ -1.33
LEMD3-202ENST00000539442 C7orf33Q8WU49 177 aa6.73□□□□□ -1.33
LEMD3-202ENST00000539442 DPH3Q96FX2 82 aa6.73□□□□□ -1.33
LEMD3-202ENST00000539442 PLAC8Q9NZF1 115 aa6.73□□□□□ -1.33
LEMD3-202ENST00000539442 DNAH5Q8TE73 4624 aa6.73□□□□□ -1.33
LEMD3-202ENST00000539442 PKD1P98161 4303 aa6.73□□□□□ -1.33
LEMD3-202ENST00000539442 A0A087WYN8 130 aa6.72□□□□□ -1.33
LEMD3-202ENST00000539442 TRBV10-3A0A0K0K1G6 114 aa6.72□□□□□ -1.33
LEMD3-202ENST00000539442 KRTAP10-1P60331 282 aa6.72□□□□□ -1.33
LEMD3-202ENST00000539442 Q1RN00 199 aa6.72□□□□□ -1.33
LEMD3-202ENST00000539442 C9orf118A6NHY6 69 aa6.71□□□□□ -1.34
LEMD3-202ENST00000539442 H7C2G1 150 aa6.71□□□□□ -1.34
LEMD3-202ENST00000539442 RPL28P46779 137 aaKnown RBP6.71□□□□□ -1.34
LEMD3-202ENST00000539442 LINC00167Q96N53 147 aa6.71□□□□□ -1.34
LEMD3-202ENST00000539442 IGLV1-50A0A075B6I6 118 aa6.7□□□□□ -1.34
LEMD3-202ENST00000539442 TRAV23DV6A0A075B6W5 121 aa6.7□□□□□ -1.34
LEMD3-202ENST00000539442 GAGE10A6NGK3 116 aa6.7□□□□□ -1.34
LEMD3-202ENST00000539442 SMIM11BQ8TCY0 68 aa6.7□□□□□ -1.34
LEMD3-202ENST00000539442 PRYO14603 147 aa6.69□□□□□ -1.34
LEMD3-202ENST00000539442 PSMB2P49721 201 aa6.69□□□□□ -1.34
LEMD3-202ENST00000539442 KCNQ1DNQ9H478 68 aa6.69□□□□□ -1.34
LEMD3-202ENST00000539442 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
LEMD3-202ENST00000539442 DNAH8Q96JB1 4490 aa6.68□□□□□ -1.34
LEMD3-202ENST00000539442 H3BUT2 72 aa6.68□□□□□ -1.34
LEMD3-202ENST00000539442 COX6CP09669 75 aa6.68□□□□□ -1.34
LEMD3-202ENST00000539442 LYRM7Q5U5X0 104 aa6.68□□□□□ -1.34
LEMD3-202ENST00000539442 PHF5AQ7RTV0 110 aaKnown RBP6.68□□□□□ -1.34
LEMD3-202ENST00000539442 RPL37AP8A6NKH3 93 aa6.67□□□□□ -1.34
LEMD3-202ENST00000539442 TRIAP1O43715 76 aa6.67□□□□□ -1.34
LEMD3-202ENST00000539442 ZNF73O43830 326 aaPredicted RBP6.67□□□□□ -1.34
LEMD3-202ENST00000539442 UBE2BP63146 152 aa6.67□□□□□ -1.34
LEMD3-202ENST00000539442 SCXQ7RTU7 201 aa6.67□□□□□ -1.34
LEMD3-202ENST00000539442 CIRBP-AS1Q8TBR5 109 aa6.67□□□□□ -1.34
LEMD3-202ENST00000539442 DIRC1Q969H9 104 aa6.67□□□□□ -1.34
LEMD3-202ENST00000539442 TRBV7-6A0A0J9YX20 115 aa6.66□□□□□ -1.34
LEMD3-202ENST00000539442 A0A1W2PPM0 123 aa6.66□□□□□ -1.34
LEMD3-202ENST00000539442 SPRR1AP35321 89 aa6.66□□□□□ -1.34
LEMD3-202ENST00000539442 C6orf99Q4VX62 202 aa6.66□□□□□ -1.34
LEMD3-202ENST00000539442 NAA38Q9BRA0 125 aaKnown RBP6.66□□□□□ -1.34
LEMD3-202ENST00000539442 H0YGX0 51 aa6.65□□□□□ -1.34
LEMD3-202ENST00000539442 SCGB1C2P0DMR2 95 aa6.65□□□□□ -1.34
LEMD3-202ENST00000539442 FABP2P12104 132 aa6.65□□□□□ -1.34
LEMD3-202ENST00000539442 VAMP3Q15836 100 aa6.65□□□□□ -1.34
LEMD3-202ENST00000539442 DYNC1H1Q14204 4646 aaKnown RBP6.65□□□□□ -1.34
LEMD3-202ENST00000539442 REG3GQ6UW15 175 aa6.64□□□□□ -1.35
LEMD3-202ENST00000539442 LRP1BQ9NZR2 4599 aa6.63□□□□□ -1.35
LEMD3-202ENST00000539442 ELOF1P60002 83 aaKnown RBP6.63□□□□□ -1.35
LEMD3-202ENST00000539442 TRBV20-1A0A075B6N2 111 aa6.62□□□□□ -1.35
LEMD3-202ENST00000539442 ETDCA0A1B0GVM5 59 aa6.62□□□□□ -1.35
LEMD3-202ENST00000539442 KRTAP4-16G5E9R7 235 aaPredicted RBP6.62□□□□□ -1.35
LEMD3-202ENST00000539442 COX7BP24311 80 aa6.62□□□□□ -1.35
LEMD3-202ENST00000539442 KRTAP11-1Q8IUC1 163 aa6.62□□□□□ -1.35
LEMD3-202ENST00000539442 PKHD1P08F94 4074 aa6.62□□□□□ -1.35
LEMD3-202ENST00000539442 A0A1B0GX51 115 aa6.61□□□□□ -1.35
LEMD3-202ENST00000539442 SPCS1Q9Y6A9 102 aa6.61□□□□□ -1.35
LEMD3-202ENST00000539442 B5MCH6 92 aa6.6□□□□□ -1.35
LEMD3-202ENST00000539442 BCE1O60756 84 aa6.6□□□□□ -1.35
LEMD3-202ENST00000539442 XGP55808 180 aa6.6□□□□□ -1.35
LEMD3-202ENST00000539442 Q6ZRX8 168 aa6.6□□□□□ -1.35
LEMD3-202ENST00000539442 H0Y9J4 135 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 K7EP34 96 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 LST1O00453 97 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 SNCGO76070 127 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 TCL1BO95988 128 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 INAFM2P0DMQ5 153 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 ATXN8Q156A1 80 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 LINC00575Q6W349 94 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 FAM19A1Q7Z5A9 133 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 CLEC2BQ92478 149 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 PSORS1C2Q9UIG4 136 aa6.59□□□□□ -1.35
LEMD3-202ENST00000539442 A0A1B0GV90 55 aa6.58□□□□□ -1.36
LEMD3-202ENST00000539442 SLC25A20O43772 301 aa6.58□□□□□ -1.36
LEMD3-202ENST00000539442 HAMPP81172 84 aa6.58□□□□□ -1.36
LEMD3-202ENST00000539442 GTF2H5Q6ZYL4 71 aa6.58□□□□□ -1.36
LEMD3-202ENST00000539442 FAM218AQ96MZ4 157 aa6.58□□□□□ -1.36
LEMD3-202ENST00000539442 DHRS4-AS1Q9P1J3 65 aa6.58□□□□□ -1.36
LEMD3-202ENST00000539442 TRACP01848 142 aa6.57□□□□□ -1.36
LEMD3-202ENST00000539442 UBE2AP49459 152 aa6.57□□□□□ -1.36
LEMD3-202ENST00000539442 hADV29S1A0JD25 119 aa6.56□□□□□ -1.36
LEMD3-202ENST00000539442 CDK2AP2O75956 126 aa6.56□□□□□ -1.36
LEMD3-202ENST00000539442 C1orf137Q5JT78 98 aa6.56□□□□□ -1.36
LEMD3-202ENST00000539442 DNAL4O96015 105 aa6.55□□□□□ -1.36
LEMD3-202ENST00000539442 PRLHP81277 87 aa6.55□□□□□ -1.36
LEMD3-202ENST00000539442 KRTAP13-1Q8IUC0 172 aa6.55□□□□□ -1.36
LEMD3-202ENST00000539442 Q9BRP9 147 aa6.55□□□□□ -1.36
LEMD3-202ENST00000539442 APOBP04114 4563 aaKnown RBP6.55□□□□□ -1.36
LEMD3-202ENST00000539442 H3BMG7 143 aa6.54□□□□□ -1.36
LEMD3-202ENST00000539442 SMCR5Q8TEV8 140 aa6.54□□□□□ -1.36
LEMD3-202ENST00000539442 ZNF861PO60384 105 aa6.53□□□□□ -1.36
LEMD3-202ENST00000539442 IGLV7-43P04211 117 aa6.53□□□□□ -1.36
LEMD3-202ENST00000539442 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.53□□□□□ -1.36
LEMD3-202ENST00000539442 UBE2V1Q13404 147 aa6.52□□□□□ -1.37
LEMD3-202ENST00000539442 OCIAD2Q56VL3 154 aa6.52□□□□□ -1.37
LEMD3-202ENST00000539442 HIGD2AQ9BW72 106 aa6.52□□□□□ -1.37
LEMD3-202ENST00000539442 C9JAW5 83 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms