RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 RICTORQ6R327 1708 aa0.41□□□□□ -2.34
SNHG1-210ENST00000539303 UNC79Q9P2D8 2635 aa0.41□□□□□ -2.34
SNHG1-210ENST00000539303 PLCH1Q4KWH8 1693 aa0.41□□□□□ -2.34
SNHG1-210ENST00000539303 LCE6AA0A183 80 aa0.41□□□□□ -2.34
SNHG1-210ENST00000539303 NDUFA4O00483 81 aa0.41□□□□□ -2.34
SNHG1-210ENST00000539303 NDUFA3O95167 84 aa0.41□□□□□ -2.34
SNHG1-210ENST00000539303 HMGA1P17096 107 aaKnown RBP0.41□□□□□ -2.34
SNHG1-210ENST00000539303 COX6B2Q6YFQ2 88 aa0.41□□□□□ -2.34
SNHG1-210ENST00000539303 WFDC13Q8IUB5 93 aa0.41□□□□□ -2.34
SNHG1-210ENST00000539303 DUOX2Q9NRD8 1548 aa0.41□□□□□ -2.34
SNHG1-210ENST00000539303 NESP48681 1621 aa0.41□□□□□ -2.34
SNHG1-210ENST00000539303 LOC730098B7Z3J9 87 aa0.4□□□□□ -2.35
SNHG1-210ENST00000539303 GPR98Q8WXG9 6306 aa0.4□□□□□ -2.35
SNHG1-210ENST00000539303 ANK2Q01484 3957 aa0.4□□□□□ -2.35
SNHG1-210ENST00000539303 TENM4Q6N022 2769 aa0.4□□□□□ -2.35
SNHG1-210ENST00000539303 DDX60LQ5H9U9 1706 aaKnown RBP0.39□□□□□ -2.35
SNHG1-210ENST00000539303 HILPDAQ9Y5L2 63 aa0.39□□□□□ -2.35
SNHG1-210ENST00000539303 CD163L1Q9NR16 1453 aa0.39□□□□□ -2.35
SNHG1-210ENST00000539303 CNOT1A5YKK6 2376 aaKnown RBP0.39□□□□□ -2.35
SNHG1-210ENST00000539303 ANKRD50Q9ULJ7 1429 aa0.38□□□□□ -2.35
SNHG1-210ENST00000539303 CSPG4Q6UVK1 2322 aa0.38□□□□□ -2.35
SNHG1-210ENST00000539303 C4AP0C0L4 1744 aa0.38□□□□□ -2.35
SNHG1-210ENST00000539303 C4BP0C0L5 1744 aa0.38□□□□□ -2.35
SNHG1-210ENST00000539303 LMTK2Q8IWU2 1503 aa0.38□□□□□ -2.35
SNHG1-210ENST00000539303 CHD6Q8TD26 2715 aa0.37□□□□□ -2.35
SNHG1-210ENST00000539303 GNG13Q9P2W3 67 aa0.37□□□□□ -2.35
SNHG1-210ENST00000539303 DNMBPQ6XZF7 1577 aa0.36□□□□□ -2.35
SNHG1-210ENST00000539303 ATXN8Q156A1 80 aa0.36□□□□□ -2.35
SNHG1-210ENST00000539303 PRO3102Q9H379 93 aa0.36□□□□□ -2.35
SNHG1-210ENST00000539303 WNK2Q9Y3S1 2297 aa0.36□□□□□ -2.35
SNHG1-210ENST00000539303 ZC3H13Q5T200 1668 aaKnown RBP0.36□□□□□ -2.35
SNHG1-210ENST00000539303 PARP4Q9UKK3 1724 aaKnown RBP0.35□□□□□ -2.35
SNHG1-210ENST00000539303 EIF2AK4Q9P2K8 1649 aaKnown RBP0.35□□□□□ -2.35
SNHG1-210ENST00000539303 WIZO95785 1651 aa0.35□□□□□ -2.35
SNHG1-210ENST00000539303 ATRQ13535 2644 aa0.35□□□□□ -2.35
SNHG1-210ENST00000539303 RALGAPBQ86X10 1494 aa0.35□□□□□ -2.35
SNHG1-210ENST00000539303 NCOR2Q9Y618 2525 aa0.34□□□□□ -2.35
SNHG1-210ENST00000539303 PKD1L1Q8TDX9 2849 aa0.34□□□□□ -2.35
SNHG1-210ENST00000539303 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
SNHG1-210ENST00000539303 C3orf79P0CE67 100 aa0.34□□□□□ -2.36
SNHG1-210ENST00000539303 LINC00158P58513 81 aa0.34□□□□□ -2.36
SNHG1-210ENST00000539303 TJP1Q07157 1748 aa0.34□□□□□ -2.36
SNHG1-210ENST00000539303 ITSN1Q15811 1721 aa0.34□□□□□ -2.36
SNHG1-210ENST00000539303 CDC42BPGQ6DT37 1551 aa0.34□□□□□ -2.36
SNHG1-210ENST00000539303 ENHOQ6UWT2 76 aa0.34□□□□□ -2.36
SNHG1-210ENST00000539303 NRAPQ86VF7 1730 aa0.34□□□□□ -2.36
SNHG1-210ENST00000539303 CSMD3Q7Z407 3707 aa0.34□□□□□ -2.36
SNHG1-210ENST00000539303 CICQ96RK0 1608 aaPredicted RBP0.34□□□□□ -2.36
SNHG1-210ENST00000539303 ASXL1Q8IXJ9 1541 aa0.33□□□□□ -2.36
SNHG1-210ENST00000539303 DIP2AQ14689 1571 aa0.33□□□□□ -2.36
SNHG1-210ENST00000539303 SYNE1Q8NF91 8797 aaKnown RBP0.33□□□□□ -2.36
SNHG1-210ENST00000539303 UBL5Q9BZL1 73 aa0.33□□□□□ -2.36
SNHG1-210ENST00000539303 ABCA9Q8IUA7 1624 aa0.33□□□□□ -2.36
SNHG1-210ENST00000539303 SPTA1P02549 2419 aa0.33□□□□□ -2.36
SNHG1-210ENST00000539303 ADAMTS12P58397 1594 aa0.32□□□□□ -2.36
SNHG1-210ENST00000539303 UBR5O95071 2799 aaPredicted RBP0.32□□□□□ -2.36
SNHG1-210ENST00000539303 MAST4O15021 2626 aa0.32□□□□□ -2.36
SNHG1-210ENST00000539303 M0R2T5 61 aa0.32□□□□□ -2.36
SNHG1-210ENST00000539303 PRM1P04553 51 aa0.32□□□□□ -2.36
SNHG1-210ENST00000539303 CELSR1Q9NYQ6 3014 aa0.32□□□□□ -2.36
SNHG1-210ENST00000539303 ABCA2Q9BZC7 2435 aa0.32□□□□□ -2.36
SNHG1-210ENST00000539303 HFM1A2PYH4 1435 aa0.31□□□□□ -2.36
SNHG1-210ENST00000539303 IGSF10Q6WRI0 2623 aa0.31□□□□□ -2.36
SNHG1-210ENST00000539303 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
SNHG1-210ENST00000539303 MRPL33O75394 65 aaKnown RBP0.31□□□□□ -2.36
SNHG1-210ENST00000539303 KNL1Q8NG31 2342 aa0.31□□□□□ -2.36
SNHG1-210ENST00000539303 MROH1Q8NDA8 1641 aa0.31□□□□□ -2.36
SNHG1-210ENST00000539303 MADDQ8WXG6 1647 aa0.31□□□□□ -2.36
SNHG1-210ENST00000539303 PTPN13Q12923 2485 aa0.3□□□□□ -2.36
SNHG1-210ENST00000539303 DEFB131BA0A096LNP1 70 aa0.3□□□□□ -2.36
SNHG1-210ENST00000539303 KCNQ1DNQ9H478 68 aa0.3□□□□□ -2.36
SNHG1-210ENST00000539303 MUC5ACP98088 5654 aa0.3□□□□□ -2.36
SNHG1-210ENST00000539303 NHSQ6T4R5 1651 aa0.3□□□□□ -2.36
SNHG1-210ENST00000539303 DEFB135Q30KP9 77 aa0.29□□□□□ -2.36
SNHG1-210ENST00000539303 FAT4Q6V0I7 4981 aa0.28□□□□□ -2.36
SNHG1-210ENST00000539303 EFCAB5A4FU69 1503 aa0.28□□□□□ -2.36
SNHG1-210ENST00000539303 HIVEP3Q5T1R4 2406 aa0.28□□□□□ -2.36
SNHG1-210ENST00000539303 SMIM31A0A1B0GVY4 71 aa0.28□□□□□ -2.36
SNHG1-210ENST00000539303 LRP1Q07954 4544 aaKnown RBP0.27□□□□□ -2.37
SNHG1-210ENST00000539303 ETDCA0A1B0GVM5 59 aa0.27□□□□□ -2.37
SNHG1-210ENST00000539303 H0YAA0 97 aa0.27□□□□□ -2.37
SNHG1-210ENST00000539303 CRIP1P50238 77 aa0.27□□□□□ -2.37
SNHG1-210ENST00000539303 CHD8Q9HCK8 2581 aa0.27□□□□□ -2.37
SNHG1-210ENST00000539303 DEPDC5O75140 1603 aa0.27□□□□□ -2.37
SNHG1-210ENST00000539303 PLXNC1O60486 1568 aa0.26□□□□□ -2.37
SNHG1-210ENST00000539303 TNXBP22105 4242 aa0.26□□□□□ -2.37
SNHG1-210ENST00000539303 PDE4DIPQ5VU43 2346 aa0.25□□□□□ -2.37
SNHG1-210ENST00000539303 RNF17Q9BXT8 1623 aaKnown RBP0.25□□□□□ -2.37
SNHG1-210ENST00000539303 A0A087WWC5 75 aa0.25□□□□□ -2.37
SNHG1-210ENST00000539303 LINC01549A6NIU2 74 aa0.25□□□□□ -2.37
SNHG1-210ENST00000539303 THOC2Q8NI27 1593 aaKnown RBP0.24□□□□□ -2.37
SNHG1-210ENST00000539303 INO80Q9ULG1 1556 aaPredicted RBP0.24□□□□□ -2.37
SNHG1-210ENST00000539303 H0YGG7 62 aa0.24□□□□□ -2.37
SNHG1-210ENST00000539303 SPRR2DP22532 72 aa0.24□□□□□ -2.37
SNHG1-210ENST00000539303 WNK1Q9H4A3 2382 aa0.24□□□□□ -2.37
SNHG1-210ENST00000539303 CCDC180Q9P1Z9 1646 aa0.24□□□□□ -2.37
SNHG1-210ENST00000539303 EP300Q09472 2414 aaPredicted RBP0.23□□□□□ -2.37
SNHG1-210ENST00000539303 LYNX1G3V0Z9 82 aa0.23□□□□□ -2.37
SNHG1-210ENST00000539303 DEFB130BP0DP73 79 aa0.23□□□□□ -2.37
SNHG1-210ENST00000539303 DEFB130AP0DP74 79 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms