RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 H3BRM9 83 aa7.9□□□□□ -1.14
SMARCA4-206ENST00000538456 DDTP30046 118 aa7.9□□□□□ -1.14
SMARCA4-206ENST00000538456 DAND5Q8N907 189 aa7.9□□□□□ -1.14
SMARCA4-206ENST00000538456 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
SMARCA4-206ENST00000538456 BOD1L2Q8IYS8 172 aa7.89□□□□□ -1.15
SMARCA4-206ENST00000538456 Q8NBF4 154 aa7.89□□□□□ -1.15
SMARCA4-206ENST00000538456 Q8NDZ9 215 aa7.89□□□□□ -1.15
SMARCA4-206ENST00000538456 SPRR4Q96PI1 79 aa7.89□□□□□ -1.15
SMARCA4-206ENST00000538456 LEPROTO15243 131 aa7.88□□□□□ -1.15
SMARCA4-206ENST00000538456 RPL24P83731 157 aaKnown RBP7.88□□□□□ -1.15
SMARCA4-206ENST00000538456 PCP2Q8IVA1 136 aa7.88□□□□□ -1.15
SMARCA4-206ENST00000538456 ERG28Q9UKR5 140 aa7.88□□□□□ -1.15
SMARCA4-206ENST00000538456 IGLV5-39A0A0G2JS06 123 aa7.86□□□□□ -1.15
SMARCA4-206ENST00000538456 J3QQQ9 107 aa7.86□□□□□ -1.15
SMARCA4-206ENST00000538456 ZNF625Q96I27 306 aaPredicted RBP7.86□□□□□ -1.15
SMARCA4-206ENST00000538456 LGALS3P17931 250 aaKnown RBP7.85□□□□□ -1.15
SMARCA4-206ENST00000538456 TSPEAR-AS2P59090 65 aa7.85□□□□□ -1.15
SMARCA4-206ENST00000538456 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
SMARCA4-206ENST00000538456 MYMXA0A1B0GTQ4 84 aa7.84□□□□□ -1.15
SMARCA4-206ENST00000538456 LINC00587B1AMM8 73 aa7.84□□□□□ -1.15
SMARCA4-206ENST00000538456 C2orf91Q6ZV80 131 aa7.84□□□□□ -1.15
SMARCA4-206ENST00000538456 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.15
SMARCA4-206ENST00000538456 HIGD1BQ9P298 99 aa7.84□□□□□ -1.15
SMARCA4-206ENST00000538456 ZNF815PA8K554 130 aa7.83□□□□□ -1.16
SMARCA4-206ENST00000538456 SPINK1P00995 79 aa7.82□□□□□ -1.16
SMARCA4-206ENST00000538456 COX17Q14061 63 aa7.82□□□□□ -1.16
SMARCA4-206ENST00000538456 NDUFA12Q9UI09 145 aa7.82□□□□□ -1.16
SMARCA4-206ENST00000538456 LCE2CQ5TA81 110 aa7.8□□□□□ -1.16
SMARCA4-206ENST00000538456 SCGB1D4Q6XE38 83 aa7.79□□□□□ -1.16
SMARCA4-206ENST00000538456 A0A0U1RRA0 63 aa7.78□□□□□ -1.16
SMARCA4-206ENST00000538456 HSD52Q0P140 79 aa7.78□□□□□ -1.16
SMARCA4-206ENST00000538456 SFTA2Q6UW10 78 aa7.78□□□□□ -1.16
SMARCA4-206ENST00000538456 SMCR5Q8TEV8 140 aa7.78□□□□□ -1.16
SMARCA4-206ENST00000538456 IGLV9-49A0A0B4J1Y8 123 aa7.77□□□□□ -1.17
SMARCA4-206ENST00000538456 A0A0J9YXY3 114 aa7.77□□□□□ -1.17
SMARCA4-206ENST00000538456 LINC00158P58513 81 aa7.77□□□□□ -1.17
SMARCA4-206ENST00000538456 HERV-K104P63124 156 aa7.77□□□□□ -1.17
SMARCA4-206ENST00000538456 MOBPQ13875 183 aa7.77□□□□□ -1.17
SMARCA4-206ENST00000538456 TAL2Q16559 108 aa7.77□□□□□ -1.17
SMARCA4-206ENST00000538456 Q8N377 158 aa7.77□□□□□ -1.17
SMARCA4-206ENST00000538456 SPANXB1Q9NS25 103 aaPredicted RBP7.77□□□□□ -1.17
SMARCA4-206ENST00000538456 M0R143 59 aa7.76□□□□□ -1.17
SMARCA4-206ENST00000538456 PRYO14603 147 aa7.76□□□□□ -1.17
SMARCA4-206ENST00000538456 NCR3O14931 201 aa7.76□□□□□ -1.17
SMARCA4-206ENST00000538456 XP32Q5T750 250 aa7.76□□□□□ -1.17
SMARCA4-206ENST00000538456 GAGE2AQ6NT46 116 aa7.76□□□□□ -1.17
SMARCA4-206ENST00000538456 ETDCA0A1B0GVM5 59 aa7.75□□□□□ -1.17
SMARCA4-206ENST00000538456 TIMM17BO60830 172 aa7.75□□□□□ -1.17
SMARCA4-206ENST00000538456 SLC25A20O43772 301 aa7.74□□□□□ -1.17
SMARCA4-206ENST00000538456 MT1HP80294 61 aa7.74□□□□□ -1.17
SMARCA4-206ENST00000538456 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
SMARCA4-206ENST00000538456 SNHG12Q9BXW3 62 aa7.74□□□□□ -1.17
SMARCA4-206ENST00000538456 SPRR1AP35321 89 aa7.73□□□□□ -1.17
SMARCA4-206ENST00000538456 HINT1P49773 126 aaPredicted RBP7.73□□□□□ -1.17
SMARCA4-206ENST00000538456 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
SMARCA4-206ENST00000538456 KRTAP19-2Q3LHN2 52 aa7.73□□□□□ -1.17
SMARCA4-206ENST00000538456 BVES-AS1Q5T3Y7 98 aa7.73□□□□□ -1.17
SMARCA4-206ENST00000538456 HIST1H4GQ99525 98 aa7.73□□□□□ -1.17
SMARCA4-206ENST00000538456 LITAFQ99732 161 aa7.73□□□□□ -1.17
SMARCA4-206ENST00000538456 Q6ZVH6 145 aa7.72□□□□□ -1.17
SMARCA4-206ENST00000538456 CEND1Q8N111 149 aa7.72□□□□□ -1.17
SMARCA4-206ENST00000538456 SPANXDQ9BXN6 97 aa7.72□□□□□ -1.17
SMARCA4-206ENST00000538456 KCNQ1DNQ9H478 68 aa7.72□□□□□ -1.17
SMARCA4-206ENST00000538456 SPANXCQ9NY87 97 aa7.72□□□□□ -1.17
SMARCA4-206ENST00000538456 KRTAP4-16G5E9R7 235 aaPredicted RBP7.71□□□□□ -1.18
SMARCA4-206ENST00000538456 ERC2-IT1O76042 136 aa7.7□□□□□ -1.18
SMARCA4-206ENST00000538456 CFC1BP0CG36 223 aa7.7□□□□□ -1.18
SMARCA4-206ENST00000538456 BATFQ16520 125 aa7.7□□□□□ -1.18
SMARCA4-206ENST00000538456 MEIG1Q5JSS6 88 aa7.7□□□□□ -1.18
SMARCA4-206ENST00000538456 TRBV10-3A0A0K0K1G6 114 aa7.69□□□□□ -1.18
SMARCA4-206ENST00000538456 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
SMARCA4-206ENST00000538456 SSBP3-AS1Q7Z2R9 100 aa7.69□□□□□ -1.18
SMARCA4-206ENST00000538456 IFITM1P13164 125 aa7.68□□□□□ -1.18
SMARCA4-206ENST00000538456 FXYD2P54710 66 aa7.68□□□□□ -1.18
SMARCA4-206ENST00000538456 ADAMTSL4-AS1Q5T5F5 129 aa7.68□□□□□ -1.18
SMARCA4-206ENST00000538456 IGLV8-61A0A075B6I0 122 aa7.67□□□□□ -1.18
SMARCA4-206ENST00000538456 TMEM238LA0A1B0GVL6 79 aa7.67□□□□□ -1.18
SMARCA4-206ENST00000538456 A6NDN8 102 aa7.67□□□□□ -1.18
SMARCA4-206ENST00000538456 A6NJY4 79 aa7.67□□□□□ -1.18
SMARCA4-206ENST00000538456 B5MCH6 92 aa7.67□□□□□ -1.18
SMARCA4-206ENST00000538456 PCOTHQ58A44 107 aa7.67□□□□□ -1.18
SMARCA4-206ENST00000538456 COL5A1-AS1Q5SY13 56 aa7.67□□□□□ -1.18
SMARCA4-206ENST00000538456 C9orf153Q5TBE3 101 aa7.67□□□□□ -1.18
SMARCA4-206ENST00000538456 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
SMARCA4-206ENST00000538456 COPS9Q8WXC6 57 aa7.66□□□□□ -1.18
SMARCA4-206ENST00000538456 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
SMARCA4-206ENST00000538456 MUSTN1Q8IVN3 82 aa7.65□□□□□ -1.18
SMARCA4-206ENST00000538456 Q9BRP9 147 aa7.65□□□□□ -1.18
SMARCA4-206ENST00000538456 A0A1B0GWB2 263 aa7.64□□□□□ -1.19
SMARCA4-206ENST00000538456 KRTAP10-6P60371 365 aaPredicted RBP7.64□□□□□ -1.19
SMARCA4-206ENST00000538456 LINC00308Q8TCZ7 52 aa7.64□□□□□ -1.19
SMARCA4-206ENST00000538456 NHP2Q9NX24 153 aaKnown RBP7.63□□□□□ -1.19
SMARCA4-206ENST00000538456 A4D1N5 150 aa7.62□□□□□ -1.19
SMARCA4-206ENST00000538456 C9orf92A6NGG3 77 aa7.62□□□□□ -1.19
SMARCA4-206ENST00000538456 SOSTDC1Q6X4U4 206 aa7.62□□□□□ -1.19
SMARCA4-206ENST00000538456 Q6ZRX8 168 aa7.62□□□□□ -1.19
SMARCA4-206ENST00000538456 M0R2T5 61 aa7.61□□□□□ -1.19
SMARCA4-206ENST00000538456 NPC2P61916 151 aa7.61□□□□□ -1.19
SMARCA4-206ENST00000538456 A0A0B4J2C4 111 aa7.6□□□□□ -1.19
SMARCA4-206ENST00000538456 LOC107984156A0A0G2JMH3 177 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms