RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 LINC00846Q9NV44 126 aa6.08□□□□□ -1.44
DDB1-211ENST00000538280 TLX1NBP0CAT3 122 aa6.07□□□□□ -1.44
DDB1-211ENST00000538280 ELOF1P60002 83 aaKnown RBP6.07□□□□□ -1.44
DDB1-211ENST00000538280 HIST1H4AP62805 103 aaKnown RBP6.07□□□□□ -1.44
DDB1-211ENST00000538280 LOC110117498A0A087WWA1 95 aa6.06□□□□□ -1.44
DDB1-211ENST00000538280 ZNF73O43830 326 aaPredicted RBP6.06□□□□□ -1.44
DDB1-211ENST00000538280 IGKV2D-24A0A075B6R9 120 aa6.05□□□□□ -1.44
DDB1-211ENST00000538280 FAM236AA0A1B0GUQ0 79 aa6.05□□□□□ -1.44
DDB1-211ENST00000538280 FAM236BA0A1B0GV22 79 aa6.05□□□□□ -1.44
DDB1-211ENST00000538280 COX7BP24311 80 aa6.05□□□□□ -1.44
DDB1-211ENST00000538280 SYCNQ0VAF6 134 aa6.05□□□□□ -1.44
DDB1-211ENST00000538280 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.05□□□□□ -1.44
DDB1-211ENST00000538280 Q6ZRP5 223 aa6.05□□□□□ -1.44
DDB1-211ENST00000538280 UPK3BQ9BT76 320 aa6.05□□□□□ -1.44
DDB1-211ENST00000538280 PLA2G2DQ9UNK4 145 aa6.05□□□□□ -1.44
DDB1-211ENST00000538280 LINC00588Q9Y4M8 146 aa6.05□□□□□ -1.44
DDB1-211ENST00000538280 CCDC179H3BU77 68 aa6.04□□□□□ -1.44
DDB1-211ENST00000538280 Q6ZQT0 140 aa6.04□□□□□ -1.44
DDB1-211ENST00000538280 LINC00528Q8N1L1 170 aa6.04□□□□□ -1.44
DDB1-211ENST00000538280 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
DDB1-211ENST00000538280 IGLV5-37A0A075B6J1 123 aa6.03□□□□□ -1.44
DDB1-211ENST00000538280 ATP5EP2Q5VTU8 51 aa6.03□□□□□ -1.44
DDB1-211ENST00000538280 Q6ZQY7 126 aa6.03□□□□□ -1.44
DDB1-211ENST00000538280 RBM3P98179 157 aaKnown RBP6.02□□□□□ -1.45
DDB1-211ENST00000538280 GHRHP01286 108 aa6.01□□□□□ -1.45
DDB1-211ENST00000538280 PDE6GP18545 87 aa6.01□□□□□ -1.45
DDB1-211ENST00000538280 RMI2Q96E14 147 aa6.01□□□□□ -1.45
DDB1-211ENST00000538280 DNAH6Q9C0G6 4158 aa6.01□□□□□ -1.45
DDB1-211ENST00000538280 VPS13DQ5THJ4 4388 aa6□□□□□ -1.45
DDB1-211ENST00000538280 IGKV3D-7A0A0C4DH55 119 aa6□□□□□ -1.45
DDB1-211ENST00000538280 TRBV7-4A0A0J9YYF1 115 aa6□□□□□ -1.45
DDB1-211ENST00000538280 KCNQ1DNQ9H478 68 aa6□□□□□ -1.45
DDB1-211ENST00000538280 USP17L23D6RBM5 183 aa5.99□□□□□ -1.45
DDB1-211ENST00000538280 SERTAD4-AS1Q5TG53 156 aa5.99□□□□□ -1.45
DDB1-211ENST00000538280 C7orf33Q8WU49 177 aa5.99□□□□□ -1.45
DDB1-211ENST00000538280 LAMTOR3Q9UHA4 124 aa5.99□□□□□ -1.45
DDB1-211ENST00000538280 B5MCH6 92 aa5.98□□□□□ -1.45
DDB1-211ENST00000538280 M0R2N4 97 aa5.98□□□□□ -1.45
DDB1-211ENST00000538280 ATOX1O00244 68 aa5.98□□□□□ -1.45
DDB1-211ENST00000538280 KRTAP4-16G5E9R7 235 aaPredicted RBP5.97□□□□□ -1.45
DDB1-211ENST00000538280 PRYO14603 147 aa5.97□□□□□ -1.45
DDB1-211ENST00000538280 SPRR1AP35321 89 aa5.97□□□□□ -1.45
DDB1-211ENST00000538280 NKAPP1Q8N9T2 125 aa5.97□□□□□ -1.45
DDB1-211ENST00000538280 LINC00476Q8WZB0 136 aa5.97□□□□□ -1.45
DDB1-211ENST00000538280 UBL5Q9BZL1 73 aa5.97□□□□□ -1.45
DDB1-211ENST00000538280 DYNC1H1Q14204 4646 aaKnown RBP5.96□□□□□ -1.46
DDB1-211ENST00000538280 UQCRQO14949 82 aa5.96□□□□□ -1.46
DDB1-211ENST00000538280 COX7CP15954 63 aa5.96□□□□□ -1.46
DDB1-211ENST00000538280 KRTAP7-1Q8IUC3 87 aa5.96□□□□□ -1.46
DDB1-211ENST00000538280 C3orf22Q8N5N4 141 aa5.96□□□□□ -1.46
DDB1-211ENST00000538280 DSCR8Q96T75 97 aa5.96□□□□□ -1.46
DDB1-211ENST00000538280 FAT2Q9NYQ8 4349 aa5.95□□□□□ -1.46
DDB1-211ENST00000538280 IGLV1-50A0A075B6I6 118 aa5.95□□□□□ -1.46
DDB1-211ENST00000538280 DNAH2Q9P225 4427 aa5.94□□□□□ -1.46
DDB1-211ENST00000538280 PKHD1P08F94 4074 aa5.94□□□□□ -1.46
DDB1-211ENST00000538280 A0A087WVE0 104 aa5.94□□□□□ -1.46
DDB1-211ENST00000538280 LOC107984640A0A0U1RRK4 108 aa5.94□□□□□ -1.46
DDB1-211ENST00000538280 LINC01547P58512 204 aaPredicted RBP5.94□□□□□ -1.46
DDB1-211ENST00000538280 Q6ZVQ6 151 aa5.94□□□□□ -1.46
DDB1-211ENST00000538280 LY6G6CO95867 125 aa5.93□□□□□ -1.46
DDB1-211ENST00000538280 APLNQ9ULZ1 77 aa5.93□□□□□ -1.46
DDB1-211ENST00000538280 CRYGAP11844 174 aa5.92□□□□□ -1.46
DDB1-211ENST00000538280 CXCL6P80162 114 aa5.92□□□□□ -1.46
DDB1-211ENST00000538280 Q6ZRX8 168 aa5.92□□□□□ -1.46
DDB1-211ENST00000538280 KRTAP1-5Q9BYS1 174 aa5.92□□□□□ -1.46
DDB1-211ENST00000538280 DHRS4-AS1Q9P1J3 65 aa5.92□□□□□ -1.46
DDB1-211ENST00000538280 SS18L2Q9UHA2 77 aa5.92□□□□□ -1.46
DDB1-211ENST00000538280 IGLV5-48A0A075B6I7 105 aa5.91□□□□□ -1.46
DDB1-211ENST00000538280 FAM168BA1KXE4 195 aa5.91□□□□□ -1.46
DDB1-211ENST00000538280 BCE1O60756 84 aa5.91□□□□□ -1.46
DDB1-211ENST00000538280 CNBPP62633 177 aaKnown RBP5.91□□□□□ -1.46
DDB1-211ENST00000538280 C9orf153Q5TBE3 101 aa5.91□□□□□ -1.46
DDB1-211ENST00000538280 FAM19A1Q7Z5A9 133 aa5.91□□□□□ -1.46
DDB1-211ENST00000538280 Q8N377 158 aa5.91□□□□□ -1.46
DDB1-211ENST00000538280 SERP2Q8N6R1 65 aa5.91□□□□□ -1.46
DDB1-211ENST00000538280 DNAH17Q9UFH2 4485 aa5.91□□□□□ -1.46
DDB1-211ENST00000538280 TNP2Q05952 138 aa5.9□□□□□ -1.46
DDB1-211ENST00000538280 MRPL55Q7Z7F7 128 aaKnown RBP5.9□□□□□ -1.46
DDB1-211ENST00000538280 Q9BRP9 147 aa5.9□□□□□ -1.46
DDB1-211ENST00000538280 DNAH11Q96DT5 4516 aa5.89□□□□□ -1.47
DDB1-211ENST00000538280 ETDCA0A1B0GVM5 59 aa5.88□□□□□ -1.47
DDB1-211ENST00000538280 A0A1B0GW54 56 aa5.87□□□□□ -1.47
DDB1-211ENST00000538280 RPL37AP8A6NKH3 93 aa5.87□□□□□ -1.47
DDB1-211ENST00000538280 C16orf90A8MZG2 172 aa5.87□□□□□ -1.47
DDB1-211ENST00000538280 FAM19A5Q7Z5A7 132 aaPredicted RBP5.87□□□□□ -1.47
DDB1-211ENST00000538280 PKD1P98161 4303 aa5.86□□□□□ -1.47
DDB1-211ENST00000538280 A0A096LNI7 61 aa5.86□□□□□ -1.47
DDB1-211ENST00000538280 HAMPP81172 84 aa5.86□□□□□ -1.47
DDB1-211ENST00000538280 C14orf177Q52M58 125 aa5.85□□□□□ -1.47
DDB1-211ENST00000538280 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
DDB1-211ENST00000538280 HSPG2P98160 4391 aa5.84□□□□□ -1.47
DDB1-211ENST00000538280 ERC2-IT1O76042 136 aa5.84□□□□□ -1.47
DDB1-211ENST00000538280 UBE2DNLQ8IWF7 75 aa5.84□□□□□ -1.47
DDB1-211ENST00000538280 TRAV7A0A075B6U4 112 aa5.83□□□□□ -1.48
DDB1-211ENST00000538280 A0A1W2PNM2 257 aa5.83□□□□□ -1.48
DDB1-211ENST00000538280 A0A1W2PNN7 141 aa5.83□□□□□ -1.48
DDB1-211ENST00000538280 NUPR2A6NF83 97 aa5.83□□□□□ -1.48
DDB1-211ENST00000538280 SMIM20Q8N5G0 67 aa5.83□□□□□ -1.48
DDB1-211ENST00000538280 ST20-AS1Q8NBB2 130 aa5.83□□□□□ -1.48
DDB1-211ENST00000538280 DEFB105AQ8NG35 78 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms