RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 HSPB8Q9UJY1 196 aa4.69□□□□□ -1.66
CPSF7-217ENST00000537162 VCYO14598 125 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 PRYO14603 147 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 SCGB1D1O95968 90 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 HBDP02042 147 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 PRSS2P07478 247 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 SPRR2EP22531 72 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 SPRR2BP35325 72 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 SPRR2AP35326 72 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 C6orf226Q5I0X4 101 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 GAGE2AQ6NT46 116 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 SMCR5Q8TEV8 140 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 URB1-AS1Q96HZ7 61 aa4.68□□□□□ -1.66
CPSF7-217ENST00000537162 IFI27P40305 119 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-217ENST00000537162 SMAGPQ0VAQ4 97 aa4.67□□□□□ -1.66
CPSF7-217ENST00000537162 TIMM17AQ99595 171 aa4.67□□□□□ -1.66
CPSF7-217ENST00000537162 A0A096LNJ9 63 aa4.66□□□□□ -1.66
CPSF7-217ENST00000537162 F8VRH5 84 aa4.66□□□□□ -1.66
CPSF7-217ENST00000537162 ATP5LO75964 103 aa4.66□□□□□ -1.66
CPSF7-217ENST00000537162 LEPROTL1O95214 131 aa4.66□□□□□ -1.66
CPSF7-217ENST00000537162 Q8NDZ9 215 aa4.66□□□□□ -1.66
CPSF7-217ENST00000537162 VAMP8Q9BV40 100 aa4.66□□□□□ -1.66
CPSF7-217ENST00000537162 SMKR1H3BMG3 65 aa4.65□□□□□ -1.67
CPSF7-217ENST00000537162 VPREB1P12018 145 aa4.65□□□□□ -1.67
CPSF7-217ENST00000537162 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
CPSF7-217ENST00000537162 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
CPSF7-217ENST00000537162 Q8IZM0 81 aa4.65□□□□□ -1.67
CPSF7-217ENST00000537162 TOMM6Q96B49 74 aa4.65□□□□□ -1.67
CPSF7-217ENST00000537162 MRPS36P82909 103 aaKnown RBP4.64□□□□□ -1.67
CPSF7-217ENST00000537162 PMCHL1Q16048 86 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 PAPPA-AS1Q5QFB9 102 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 PET117Q6UWS5 81 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 HRCT1Q6UXD1 115 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 TEX43Q6ZNM6 134 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 ERASQ7Z444 233 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 FAM19A3Q7Z5A8 133 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 MAP1LC3CQ9BXW4 147 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 PRO1933Q9H354 126 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 CYSLTR1Q9Y271 337 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 PYGO1Q9Y3Y4 419 aa4.64□□□□□ -1.67
CPSF7-217ENST00000537162 TRAV12-1A0A0B4J245 112 aa4.63□□□□□ -1.67
CPSF7-217ENST00000537162 LOC389332A0A1B0GUA5 103 aa4.63□□□□□ -1.67
CPSF7-217ENST00000537162 SYS1-DBNDD2H3BUS1 97 aa4.63□□□□□ -1.67
CPSF7-217ENST00000537162 KRTDAPP60985 99 aa4.63□□□□□ -1.67
CPSF7-217ENST00000537162 LINC01545Q5VT33 79 aa4.63□□□□□ -1.67
CPSF7-217ENST00000537162 LINC01561Q8N1V8 128 aa4.63□□□□□ -1.67
CPSF7-217ENST00000537162 Q8N9P0 234 aaPredicted RBP4.63□□□□□ -1.67
CPSF7-217ENST00000537162 IFI27L1Q96BM0 104 aa4.63□□□□□ -1.67
CPSF7-217ENST00000537162 TMEM141Q96I45 108 aa4.63□□□□□ -1.67
CPSF7-217ENST00000537162 C14orf144Q96I85 54 aa4.63□□□□□ -1.67
CPSF7-217ENST00000537162 SPANXA1Q9NS26 97 aa4.63□□□□□ -1.67
CPSF7-217ENST00000537162 IGIPA6NJ69 53 aa4.62□□□□□ -1.67
CPSF7-217ENST00000537162 A6NN06 94 aa4.62□□□□□ -1.67
CPSF7-217ENST00000537162 C3orf79P0CE67 100 aa4.62□□□□□ -1.67
CPSF7-217ENST00000537162 ZC2HC1BQ5TFG8 222 aa4.62□□□□□ -1.67
CPSF7-217ENST00000537162 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
CPSF7-217ENST00000537162 Q6ZN92 141 aa4.62□□□□□ -1.67
CPSF7-217ENST00000537162 M0R143 59 aa4.61□□□□□ -1.67
CPSF7-217ENST00000537162 ERC2-IT1O76042 136 aa4.61□□□□□ -1.67
CPSF7-217ENST00000537162 MIEN1Q9BRT3 115 aa4.61□□□□□ -1.67
CPSF7-217ENST00000537162 C2orf88Q9BSF0 95 aa4.61□□□□□ -1.67
CPSF7-217ENST00000537162 HSBP1L1C9JCN9 74 aa4.6□□□□□ -1.67
CPSF7-217ENST00000537162 PLNP26678 52 aa4.6□□□□□ -1.67
CPSF7-217ENST00000537162 C9orf153Q5TBE3 101 aa4.6□□□□□ -1.67
CPSF7-217ENST00000537162 UQCR10Q9UDW1 63 aa4.6□□□□□ -1.67
CPSF7-217ENST00000537162 PAM16Q9Y3D7 125 aa4.6□□□□□ -1.67
CPSF7-217ENST00000537162 SPATA45Q537H7 98 aa4.59□□□□□ -1.67
CPSF7-217ENST00000537162 SCGB3A1Q96QR1 104 aa4.59□□□□□ -1.67
CPSF7-217ENST00000537162 LIMD2Q9BT23 127 aa4.59□□□□□ -1.67
CPSF7-217ENST00000537162 IGLV4-3A0A075B6K6 122 aa4.58□□□□□ -1.68
CPSF7-217ENST00000537162 SEC11AP67812 179 aa4.58□□□□□ -1.68
CPSF7-217ENST00000537162 PMVKQ15126 192 aa4.58□□□□□ -1.68
CPSF7-217ENST00000537162 AMELXQ99217 191 aa4.58□□□□□ -1.68
CPSF7-217ENST00000537162 DPM2O94777 84 aa4.56□□□□□ -1.68
CPSF7-217ENST00000537162 COL5A1-AS1Q5SY13 56 aa4.56□□□□□ -1.68
CPSF7-217ENST00000537162 C1orf195Q5TG92 126 aa4.56□□□□□ -1.68
CPSF7-217ENST00000537162 ATP11AUNQ6ZP68 121 aa4.56□□□□□ -1.68
CPSF7-217ENST00000537162 PMCHL2Q9BQD1 86 aa4.56□□□□□ -1.68
CPSF7-217ENST00000537162 CST9LQ9H4G1 147 aa4.56□□□□□ -1.68
CPSF7-217ENST00000537162 A0A1B0GV90 55 aa4.55□□□□□ -1.68
CPSF7-217ENST00000537162 IGKCP01834 107 aa4.55□□□□□ -1.68
CPSF7-217ENST00000537162 IGLC3P0DOY3 106 aa4.55□□□□□ -1.68
CPSF7-217ENST00000537162 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
CPSF7-217ENST00000537162 SNHG12Q9BXW3 62 aa4.55□□□□□ -1.68
CPSF7-217ENST00000537162 VCX2Q9H322 139 aa4.55□□□□□ -1.68
CPSF7-217ENST00000537162 CDKN2A-AS1Q9UH64 79 aa4.55□□□□□ -1.68
CPSF7-217ENST00000537162 TRBV20-1A0A075B6N2 111 aa4.54□□□□□ -1.68
CPSF7-217ENST00000537162 IGLV5-45A0A087WSX0 123 aa4.54□□□□□ -1.68
CPSF7-217ENST00000537162 C11orf86A6NJI1 115 aa4.54□□□□□ -1.68
CPSF7-217ENST00000537162 DLEU1O43261 78 aa4.54□□□□□ -1.68
CPSF7-217ENST00000537162 SND1-IT1Q9HBX3 110 aa4.54□□□□□ -1.68
CPSF7-217ENST00000537162 FAM236DA0A1B0GTK5 79 aa4.53□□□□□ -1.68
CPSF7-217ENST00000537162 TINCRA0A1B0GVN0 87 aa4.53□□□□□ -1.68
CPSF7-217ENST00000537162 FAM236CP0DP71 79 aa4.53□□□□□ -1.68
CPSF7-217ENST00000537162 SPRR1AP35321 89 aa4.53□□□□□ -1.68
CPSF7-217ENST00000537162 CXCL5P42830 114 aa4.53□□□□□ -1.68
CPSF7-217ENST00000537162 HERVK_113P61574 105 aa4.53□□□□□ -1.68
CPSF7-217ENST00000537162 HERVK_113P63121 156 aa4.53□□□□□ -1.68
CPSF7-217ENST00000537162 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
CPSF7-217ENST00000537162 E9PLD3 99 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms