RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 LINC01556Q5JQF7 62 aa3.54□□□□□ -1.84
PTPRD-213ENST00000537002 OXLD1Q5BKU9 147 aa3.54□□□□□ -1.84
PTPRD-213ENST00000537002 KRTAP21-3Q3LHN1 58 aa3.54□□□□□ -1.84
PTPRD-213ENST00000537002 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
PTPRD-213ENST00000537002 IGFL1Q6UW32 110 aa3.54□□□□□ -1.84
PTPRD-213ENST00000537002 Q8N377 158 aa3.53□□□□□ -1.84
PTPRD-213ENST00000537002 H3BS24 57 aa3.53□□□□□ -1.84
PTPRD-213ENST00000537002 CCDC168Q8NDH2 2452 aa3.53□□□□□ -1.84
PTPRD-213ENST00000537002 A6NN06 94 aa3.53□□□□□ -1.84
PTPRD-213ENST00000537002 ABCA2Q9BZC7 2435 aa3.53□□□□□ -1.84
PTPRD-213ENST00000537002 A0A1W2PNM2 257 aa3.53□□□□□ -1.84
PTPRD-213ENST00000537002 C16orf90A8MZG2 172 aa3.53□□□□□ -1.84
PTPRD-213ENST00000537002 LY6G6CO95867 125 aa3.53□□□□□ -1.84
PTPRD-213ENST00000537002 JMJD1CQ15652 2540 aa3.53□□□□□ -1.84
PTPRD-213ENST00000537002 H3BNG1 76 aa3.53□□□□□ -1.85
PTPRD-213ENST00000537002 IGLV1-50A0A075B6I6 118 aa3.52□□□□□ -1.85
PTPRD-213ENST00000537002 IGLV7-46A0A075B6I9 117 aa3.52□□□□□ -1.85
PTPRD-213ENST00000537002 CSNK1G2-AS1Q8NCQ2 148 aa3.52□□□□□ -1.85
PTPRD-213ENST00000537002 MYO18BQ8IUG5 2567 aa3.52□□□□□ -1.85
PTPRD-213ENST00000537002 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
PTPRD-213ENST00000537002 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
PTPRD-213ENST00000537002 IGLV5-37A0A075B6J1 123 aa3.51□□□□□ -1.85
PTPRD-213ENST00000537002 NBEAQ8NFP9 2946 aa3.51□□□□□ -1.85
PTPRD-213ENST00000537002 DOPEY1Q5JWR5 2465 aa3.51□□□□□ -1.85
PTPRD-213ENST00000537002 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
PTPRD-213ENST00000537002 TNP2Q05952 138 aa3.51□□□□□ -1.85
PTPRD-213ENST00000537002 MOBPQ13875 183 aa3.51□□□□□ -1.85
PTPRD-213ENST00000537002 LRRK2Q5S007 2527 aa3.51□□□□□ -1.85
PTPRD-213ENST00000537002 DSCR10P59022 87 aa3.51□□□□□ -1.85
PTPRD-213ENST00000537002 WWC2-AS2Q96NR7 200 aa3.51□□□□□ -1.85
PTPRD-213ENST00000537002 TLX1NBP0CAT3 122 aa3.5□□□□□ -1.85
PTPRD-213ENST00000537002 RYR1P21817 5038 aa3.5□□□□□ -1.85
PTPRD-213ENST00000537002 UQCR11O14957 56 aa3.5□□□□□ -1.85
PTPRD-213ENST00000537002 SSBP3-AS1Q7Z2R9 100 aa3.49□□□□□ -1.85
PTPRD-213ENST00000537002 MRPL34Q9BQ48 92 aaKnown RBP3.49□□□□□ -1.85
PTPRD-213ENST00000537002 GIG44P09565 113 aaPredicted RBP3.49□□□□□ -1.85
PTPRD-213ENST00000537002 C8orf17Q9NRJ1 99 aa3.48□□□□□ -1.85
PTPRD-213ENST00000537002 FASNP49327 2511 aaKnown RBP3.48□□□□□ -1.85
PTPRD-213ENST00000537002 FN1P02751 2386 aaKnown RBP3.48□□□□□ -1.85
PTPRD-213ENST00000537002 C15orf56Q8N910 161 aa3.48□□□□□ -1.85
PTPRD-213ENST00000537002 SPRR1AP35321 89 aa3.48□□□□□ -1.85
PTPRD-213ENST00000537002 UTRNP46939 3433 aa3.48□□□□□ -1.85
PTPRD-213ENST00000537002 CNBPP62633 177 aaKnown RBP3.48□□□□□ -1.85
PTPRD-213ENST00000537002 KRTAP1-3Q8IUG1 177 aa3.48□□□□□ -1.85
PTPRD-213ENST00000537002 LINC01554Q52M75 96 aa3.48□□□□□ -1.85
PTPRD-213ENST00000537002 C9orf163Q8N9P6 203 aa3.48□□□□□ -1.85
PTPRD-213ENST00000537002 Q8NDZ9 215 aa3.48□□□□□ -1.85
PTPRD-213ENST00000537002 ZFYVE26Q68DK2 2539 aa3.47□□□□□ -1.85
PTPRD-213ENST00000537002 SPTBN4Q9H254 2564 aa3.47□□□□□ -1.85
PTPRD-213ENST00000537002 Q8NAQ8 132 aa3.47□□□□□ -1.85
PTPRD-213ENST00000537002 CHTF8P0CG12 524 aa3.47□□□□□ -1.85
PTPRD-213ENST00000537002 KRTAP1-1Q07627 177 aa3.46□□□□□ -1.86
PTPRD-213ENST00000537002 C19orf73Q9NVV2 129 aa3.46□□□□□ -1.86
PTPRD-213ENST00000537002 KRTAP29-1A8MX34 341 aaPredicted RBP3.46□□□□□ -1.86
PTPRD-213ENST00000537002 LINC00313P59037 77 aa3.45□□□□□ -1.86
PTPRD-213ENST00000537002 DSPP15924 2871 aaKnown RBP3.45□□□□□ -1.86
PTPRD-213ENST00000537002 PRR26Q8N8Z3 221 aa3.45□□□□□ -1.86
PTPRD-213ENST00000537002 C1orf134Q5TEV5 83 aa3.45□□□□□ -1.86
PTPRD-213ENST00000537002 IGLV5-52A0A0A0MRZ9 124 aa3.44□□□□□ -1.86
PTPRD-213ENST00000537002 PLA2G1BP04054 148 aaKnown RBP3.44□□□□□ -1.86
PTPRD-213ENST00000537002 C5orf42Q9H799 3197 aa3.44□□□□□ -1.86
PTPRD-213ENST00000537002 A0A1B0GVX0 72 aa3.44□□□□□ -1.86
PTPRD-213ENST00000537002 SPACA4Q8TDM5 124 aa3.44□□□□□ -1.86
PTPRD-213ENST00000537002 SPINK7P58062 85 aa3.44□□□□□ -1.86
PTPRD-213ENST00000537002 PLAC8Q9NZF1 115 aa3.44□□□□□ -1.86
PTPRD-213ENST00000537002 ANKRD17O75179 2603 aaKnown RBP3.43□□□□□ -1.86
PTPRD-213ENST00000537002 SETD2Q9BYW2 2564 aaPredicted RBP3.42□□□□□ -1.86
PTPRD-213ENST00000537002 FAM229AH3BQW9 127 aa3.42□□□□□ -1.86
PTPRD-213ENST00000537002 SPRR1BP22528 89 aa3.42□□□□□ -1.86
PTPRD-213ENST00000537002 KRTAP4-16G5E9R7 235 aaPredicted RBP3.42□□□□□ -1.86
PTPRD-213ENST00000537002 MTORP42345 2549 aa3.42□□□□□ -1.86
PTPRD-213ENST00000537002 FLNBO75369 2602 aaKnown RBP3.41□□□□□ -1.86
PTPRD-213ENST00000537002 Q6ZR54 194 aa3.41□□□□□ -1.86
PTPRD-213ENST00000537002 CASC10Q5T4H9 136 aa3.41□□□□□ -1.86
PTPRD-213ENST00000537002 LAMA2P24043 3122 aaKnown RBP3.41□□□□□ -1.86
PTPRD-213ENST00000537002 ZNF292O60281 2723 aa3.4□□□□□ -1.86
PTPRD-213ENST00000537002 RANBP2P49792 3224 aaKnown RBP3.4□□□□□ -1.87
PTPRD-213ENST00000537002 HECTD1Q9ULT8 2610 aa3.4□□□□□ -1.87
PTPRD-213ENST00000537002 HRES1P13985 223 aa3.4□□□□□ -1.87
PTPRD-213ENST00000537002 Q96NJ1 140 aa3.4□□□□□ -1.87
PTPRD-213ENST00000537002 TNRC18O15417 2968 aaPredicted RBP3.39□□□□□ -1.87
PTPRD-213ENST00000537002 CSAG1Q6PB30 78 aa3.39□□□□□ -1.87
PTPRD-213ENST00000537002 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
PTPRD-213ENST00000537002 J3QL48 77 aa3.39□□□□□ -1.87
PTPRD-213ENST00000537002 DNAH10OSP0CZ25 163 aa3.39□□□□□ -1.87
PTPRD-213ENST00000537002 LINC00472Q9H8W2 130 aa3.39□□□□□ -1.87
PTPRD-213ENST00000537002 ABCA12Q86UK0 2595 aa3.38□□□□□ -1.87
PTPRD-213ENST00000537002 MMP24-AS1A0A0U1RRL7 71 aa3.37□□□□□ -1.87
PTPRD-213ENST00000537002 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
PTPRD-213ENST00000537002 A8MU10 97 aa3.37□□□□□ -1.87
PTPRD-213ENST00000537002 APLNQ9ULZ1 77 aa3.37□□□□□ -1.87
PTPRD-213ENST00000537002 K7EIL1 84 aa3.37□□□□□ -1.87
PTPRD-213ENST00000537002 CR1P17927 2039 aa3.37□□□□□ -1.87
PTPRD-213ENST00000537002 RTL8CO15255 209 aa3.36□□□□□ -1.87
PTPRD-213ENST00000537002 Q8N1X5 172 aa3.36□□□□□ -1.87
PTPRD-213ENST00000537002 MAP1AP78559 2803 aaPredicted RBP3.36□□□□□ -1.87
PTPRD-213ENST00000537002 USP24Q9UPU5 2620 aa3.36□□□□□ -1.87
PTPRD-213ENST00000537002 KRTAP26-1Q6PEX3 210 aa3.36□□□□□ -1.87
PTPRD-213ENST00000537002 CFAP54Q96N23 3096 aa3.35□□□□□ -1.87
PTPRD-213ENST00000537002 F8P00451 2351 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms