RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 K7EP34 96 aa7.5□□□□□ -1.21
PRKDC-207ENST00000536483 HERV-K104P63124 156 aa7.5□□□□□ -1.21
PRKDC-207ENST00000536483 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
PRKDC-207ENST00000536483 PRR26Q8N8Z3 221 aa7.5□□□□□ -1.21
PRKDC-207ENST00000536483 SPANXDQ9BXN6 97 aa7.5□□□□□ -1.21
PRKDC-207ENST00000536483 SPANXCQ9NY87 97 aa7.5□□□□□ -1.21
PRKDC-207ENST00000536483 ZNF861PO60384 105 aa7.49□□□□□ -1.21
PRKDC-207ENST00000536483 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
PRKDC-207ENST00000536483 A0A0B4J2C4 111 aa7.48□□□□□ -1.21
PRKDC-207ENST00000536483 RAB37Q96AX2 223 aa7.48□□□□□ -1.21
PRKDC-207ENST00000536483 LINC00167Q96N53 147 aa7.48□□□□□ -1.21
PRKDC-207ENST00000536483 ERG28Q9UKR5 140 aa7.48□□□□□ -1.21
PRKDC-207ENST00000536483 SND1-IT1Q9HBX3 110 aa7.47□□□□□ -1.21
PRKDC-207ENST00000536483 SPCS1Q9Y6A9 102 aa7.47□□□□□ -1.21
PRKDC-207ENST00000536483 MUC2Q02817 5179 aa7.46□□□□□ -1.21
PRKDC-207ENST00000536483 IGLV1-50A0A075B6I6 118 aa7.46□□□□□ -1.22
PRKDC-207ENST00000536483 BCE1O60756 84 aa7.46□□□□□ -1.22
PRKDC-207ENST00000536483 VPREB1P12018 145 aa7.45□□□□□ -1.22
PRKDC-207ENST00000536483 PFN2P35080 140 aa7.45□□□□□ -1.22
PRKDC-207ENST00000536483 PRO1854Q9UHT4 67 aa7.45□□□□□ -1.22
PRKDC-207ENST00000536483 TRBV20-1A0A075B6N2 111 aa7.44□□□□□ -1.22
PRKDC-207ENST00000536483 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
PRKDC-207ENST00000536483 CFC1P0CG37 223 aa7.44□□□□□ -1.22
PRKDC-207ENST00000536483 KRTAP13-1Q8IUC0 172 aa7.44□□□□□ -1.22
PRKDC-207ENST00000536483 MUSTN1Q8IVN3 82 aa7.44□□□□□ -1.22
PRKDC-207ENST00000536483 LITAFQ99732 161 aa7.44□□□□□ -1.22
PRKDC-207ENST00000536483 K7ERJ3 54 aa7.43□□□□□ -1.22
PRKDC-207ENST00000536483 RPL28P46779 137 aaKnown RBP7.43□□□□□ -1.22
PRKDC-207ENST00000536483 NKAPP1Q8N9T2 125 aa7.43□□□□□ -1.22
PRKDC-207ENST00000536483 A4D1N5 150 aa7.42□□□□□ -1.22
PRKDC-207ENST00000536483 F8W1H4 67 aa7.42□□□□□ -1.22
PRKDC-207ENST00000536483 RPL37AP8A6NKH3 93 aa7.41□□□□□ -1.22
PRKDC-207ENST00000536483 RPL13AP40429 203 aaKnown RBP7.41□□□□□ -1.22
PRKDC-207ENST00000536483 TSPAN13O95857 204 aa7.4□□□□□ -1.22
PRKDC-207ENST00000536483 Q8NDZ9 215 aa7.4□□□□□ -1.22
PRKDC-207ENST00000536483 LOC107984156A0A0G2JMH3 177 aa7.39□□□□□ -1.23
PRKDC-207ENST00000536483 LINC00158P58513 81 aa7.39□□□□□ -1.23
PRKDC-207ENST00000536483 PRR4Q16378 134 aa7.39□□□□□ -1.23
PRKDC-207ENST00000536483 ARL17AQ8IVW1 177 aa7.39□□□□□ -1.23
PRKDC-207ENST00000536483 ADAMTSL4-AS1Q5T5F5 129 aa7.38□□□□□ -1.23
PRKDC-207ENST00000536483 K7ERU9 68 aa7.37□□□□□ -1.23
PRKDC-207ENST00000536483 COX6CP09669 75 aa7.37□□□□□ -1.23
PRKDC-207ENST00000536483 MEIG1Q5JSS6 88 aa7.37□□□□□ -1.23
PRKDC-207ENST00000536483 LINC00308Q8TCZ7 52 aa7.37□□□□□ -1.23
PRKDC-207ENST00000536483 NAA38Q9BRA0 125 aaKnown RBP7.37□□□□□ -1.23
PRKDC-207ENST00000536483 TMEM126AQ9H061 195 aa7.37□□□□□ -1.23
PRKDC-207ENST00000536483 IGKV2-28A0A075B6P5 120 aa7.36□□□□□ -1.23
PRKDC-207ENST00000536483 M0R378 163 aa7.36□□□□□ -1.23
PRKDC-207ENST00000536483 IGKV2D-28P01615 120 aa7.36□□□□□ -1.23
PRKDC-207ENST00000536483 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
PRKDC-207ENST00000536483 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
PRKDC-207ENST00000536483 SCGB1C2P0DMR2 95 aa7.35□□□□□ -1.23
PRKDC-207ENST00000536483 MIR7-3HGQ8N6C7 128 aa7.35□□□□□ -1.23
PRKDC-207ENST00000536483 UBE2AP49459 152 aa7.34□□□□□ -1.23
PRKDC-207ENST00000536483 PSMB2P49721 201 aa7.34□□□□□ -1.23
PRKDC-207ENST00000536483 FAM229BQ4G0N7 80 aa7.34□□□□□ -1.23
PRKDC-207ENST00000536483 OCIAD2Q56VL3 154 aa7.34□□□□□ -1.23
PRKDC-207ENST00000536483 A0A087X002 238 aa7.33□□□□□ -1.24
PRKDC-207ENST00000536483 TRAV13-2A0A0B4J235 113 aa7.33□□□□□ -1.24
PRKDC-207ENST00000536483 H3BMG7 143 aa7.33□□□□□ -1.24
PRKDC-207ENST00000536483 J3QR89 54 aa7.33□□□□□ -1.24
PRKDC-207ENST00000536483 CRYGAP11844 174 aa7.33□□□□□ -1.24
PRKDC-207ENST00000536483 SPRR1AP35321 89 aa7.33□□□□□ -1.24
PRKDC-207ENST00000536483 KCNQ1DNQ9H478 68 aa7.33□□□□□ -1.24
PRKDC-207ENST00000536483 A0A0U1RRA0 63 aa7.32□□□□□ -1.24
PRKDC-207ENST00000536483 ATXN8Q156A1 80 aa7.32□□□□□ -1.24
PRKDC-207ENST00000536483 Q1RN00 199 aa7.32□□□□□ -1.24
PRKDC-207ENST00000536483 PRO0461Q9UI25 63 aa7.32□□□□□ -1.24
PRKDC-207ENST00000536483 EIF4EBP3O60516 100 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-207ENST00000536483 FAT4Q6V0I7 4981 aa7.31□□□□□ -1.24
PRKDC-207ENST00000536483 TRBV10-2A0A0K0K1G8 114 aa7.3□□□□□ -1.24
PRKDC-207ENST00000536483 KRTAP4-16G5E9R7 235 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-207ENST00000536483 PRYO14603 147 aa7.3□□□□□ -1.24
PRKDC-207ENST00000536483 PRLHP81277 87 aa7.3□□□□□ -1.24
PRKDC-207ENST00000536483 FAM19A1Q7Z5A9 133 aa7.3□□□□□ -1.24
PRKDC-207ENST00000536483 LINC00337Q8N6G1 96 aa7.3□□□□□ -1.24
PRKDC-207ENST00000536483 NDUFC2O95298 119 aa7.29□□□□□ -1.24
PRKDC-207ENST00000536483 TCL1BO95988 128 aa7.29□□□□□ -1.24
PRKDC-207ENST00000536483 KRTAP13-2Q52LG2 175 aa7.29□□□□□ -1.24
PRKDC-207ENST00000536483 A0A0U1RQV1 116 aa7.28□□□□□ -1.24
PRKDC-207ENST00000536483 SOSTDC1Q6X4U4 206 aa7.28□□□□□ -1.24
PRKDC-207ENST00000536483 CBY1Q9Y3M2 126 aa7.28□□□□□ -1.24
PRKDC-207ENST00000536483 TRIAP1O43715 76 aa7.27□□□□□ -1.25
PRKDC-207ENST00000536483 DAND5Q8N907 189 aa7.27□□□□□ -1.25
PRKDC-207ENST00000536483 TYMSOSQ8TAI1 123 aa7.27□□□□□ -1.25
PRKDC-207ENST00000536483 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.25
PRKDC-207ENST00000536483 TRBV10-3A0A0K0K1G6 114 aa7.26□□□□□ -1.25
PRKDC-207ENST00000536483 KRTAP9-2Q9BYQ4 174 aa7.26□□□□□ -1.25
PRKDC-207ENST00000536483 H3BT86 120 aa7.25□□□□□ -1.25
PRKDC-207ENST00000536483 H7C2G1 150 aa7.25□□□□□ -1.25
PRKDC-207ENST00000536483 LST1O00453 97 aa7.25□□□□□ -1.25
PRKDC-207ENST00000536483 NPC2P61916 151 aa7.25□□□□□ -1.25
PRKDC-207ENST00000536483 H0YGX0 51 aa7.24□□□□□ -1.25
PRKDC-207ENST00000536483 NCR3O14931 201 aa7.24□□□□□ -1.25
PRKDC-207ENST00000536483 SLC25A20O43772 301 aa7.24□□□□□ -1.25
PRKDC-207ENST00000536483 IGLV6-57P01721 117 aa7.24□□□□□ -1.25
PRKDC-207ENST00000536483 TEN1Q86WV5 123 aa7.24□□□□□ -1.25
PRKDC-207ENST00000536483 SPRR4Q96PI1 79 aa7.24□□□□□ -1.25
PRKDC-207ENST00000536483 TRACP01848 142 aa7.23□□□□□ -1.25
PRKDC-207ENST00000536483 ETDBQ3ZM63 59 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms