RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 C1orf158Q8N1D5 194 aa4.48□□□□□ -1.69
USP28-202ENST00000535607 TMEM254Q8TBM7 123 aa4.48□□□□□ -1.69
USP28-202ENST00000535607 NOP10Q9NPE3 64 aaKnown RBP4.48□□□□□ -1.69
USP28-202ENST00000535607 RPL35AP18077 110 aaKnown RBP4.47□□□□□ -1.69
USP28-202ENST00000535607 ESRGQ1W209 222 aa4.47□□□□□ -1.69
USP28-202ENST00000535607 CD164L2Q6UWJ8 174 aa4.47□□□□□ -1.69
USP28-202ENST00000535607 DIRC1Q969H9 104 aa4.47□□□□□ -1.69
USP28-202ENST00000535607 RMI2Q96E14 147 aa4.47□□□□□ -1.69
USP28-202ENST00000535607 PKIGQ9Y2B9 76 aa4.47□□□□□ -1.69
USP28-202ENST00000535607 SNURFQ9Y675 71 aa4.47□□□□□ -1.69
USP28-202ENST00000535607 TEP1Q99973 2627 aaKnown RBP4.46□□□□□ -1.69
USP28-202ENST00000535607 IGLV4-60A0A075B6I1 120 aa4.46□□□□□ -1.7
USP28-202ENST00000535607 TRBV7-4A0A0J9YYF1 115 aa4.46□□□□□ -1.7
USP28-202ENST00000535607 C10orf99Q6UWK7 81 aa4.46□□□□□ -1.7
USP28-202ENST00000535607 ANK2Q01484 3957 aa4.45□□□□□ -1.7
USP28-202ENST00000535607 TRAV10A0A0B4J240 114 aa4.45□□□□□ -1.7
USP28-202ENST00000535607 PLAC8L1A1L4L8 177 aa4.45□□□□□ -1.7
USP28-202ENST00000535607 PRM2P04554 102 aa4.45□□□□□ -1.7
USP28-202ENST00000535607 COX7BP24311 80 aa4.45□□□□□ -1.7
USP28-202ENST00000535607 SEC61GP60059 68 aa4.45□□□□□ -1.7
USP28-202ENST00000535607 KRTAP24-1Q3LI83 254 aa4.45□□□□□ -1.7
USP28-202ENST00000535607 Q6ZTC4 211 aa4.45□□□□□ -1.7
USP28-202ENST00000535607 FP248Q71RG6 208 aaPredicted RBP4.45□□□□□ -1.7
USP28-202ENST00000535607 ATRQ13535 2644 aa4.45□□□□□ -1.7
USP28-202ENST00000535607 JMJD1CQ15652 2540 aa4.44□□□□□ -1.7
USP28-202ENST00000535607 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
USP28-202ENST00000535607 MT3P25713 68 aa4.44□□□□□ -1.7
USP28-202ENST00000535607 HIGD2BQ4VC39 106 aa4.44□□□□□ -1.7
USP28-202ENST00000535607 SPATA3Q8NHX4 192 aa4.44□□□□□ -1.7
USP28-202ENST00000535607 KRTAP1-5Q9BYS1 174 aa4.44□□□□□ -1.7
USP28-202ENST00000535607 LYRM9A8MSI8 78 aa4.43□□□□□ -1.7
USP28-202ENST00000535607 Q6ZQY7 126 aa4.43□□□□□ -1.7
USP28-202ENST00000535607 FBN1P35555 2871 aaKnown RBP4.43□□□□□ -1.7
USP28-202ENST00000535607 SETD2Q9BYW2 2564 aaPredicted RBP4.42□□□□□ -1.7
USP28-202ENST00000535607 A0A0U1RQV1 116 aa4.42□□□□□ -1.7
USP28-202ENST00000535607 NDUFB1O75438 58 aa4.42□□□□□ -1.7
USP28-202ENST00000535607 DEFB136Q30KP8 78 aa4.42□□□□□ -1.7
USP28-202ENST00000535607 PRR15Q8IV56 129 aa4.42□□□□□ -1.7
USP28-202ENST00000535607 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
USP28-202ENST00000535607 TM2D3Q9BRN9 247 aa4.42□□□□□ -1.7
USP28-202ENST00000535607 PRO0255Q9UI72 69 aa4.42□□□□□ -1.7
USP28-202ENST00000535607 TENM1Q9UKZ4 2725 aa4.41□□□□□ -1.7
USP28-202ENST00000535607 GVQW2A0A096LPI5 108 aaPredicted RBP4.41□□□□□ -1.7
USP28-202ENST00000535607 A0A0J9YWU9 116 aa4.41□□□□□ -1.7
USP28-202ENST00000535607 LOC100131303A0A0U1RQF7 123 aa4.41□□□□□ -1.7
USP28-202ENST00000535607 SPAG11BQ08648 103 aa4.41□□□□□ -1.7
USP28-202ENST00000535607 KRTAP21-3Q3LHN1 58 aa4.41□□□□□ -1.7
USP28-202ENST00000535607 CHCHD10Q8WYQ3 142 aaPredicted RBP4.41□□□□□ -1.7
USP28-202ENST00000535607 ZNF73O43830 326 aaPredicted RBP4.4□□□□□ -1.71
USP28-202ENST00000535607 ELOF1P60002 83 aaKnown RBP4.4□□□□□ -1.71
USP28-202ENST00000535607 KRTAP10-3P60369 221 aa4.4□□□□□ -1.71
USP28-202ENST00000535607 PRR3P79522 188 aaKnown RBP4.4□□□□□ -1.71
USP28-202ENST00000535607 REG3AQ06141 175 aa4.4□□□□□ -1.71
USP28-202ENST00000535607 KIAA0087Q14695 138 aa4.4□□□□□ -1.71
USP28-202ENST00000535607 Q1T7F1 81 aa4.4□□□□□ -1.71
USP28-202ENST00000535607 M0R378 163 aa4.39□□□□□ -1.71
USP28-202ENST00000535607 ANGP03950 147 aaKnown RBP4.39□□□□□ -1.71
USP28-202ENST00000535607 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
USP28-202ENST00000535607 LINC00269Q8N2A0 174 aa4.39□□□□□ -1.71
USP28-202ENST00000535607 OCR1Q9BZK8 76 aa4.39□□□□□ -1.71
USP28-202ENST00000535607 LINC00474Q9P2X8 69 aa4.39□□□□□ -1.71
USP28-202ENST00000535607 IGLV7-46A0A075B6I9 117 aa4.38□□□□□ -1.71
USP28-202ENST00000535607 IGLV1-51P01701 117 aa4.38□□□□□ -1.71
USP28-202ENST00000535607 DAD1P61803 113 aa4.38□□□□□ -1.71
USP28-202ENST00000535607 LINC00612Q8N6U2 182 aa4.38□□□□□ -1.71
USP28-202ENST00000535607 COL6A5A8TX70 2615 aa4.37□□□□□ -1.71
USP28-202ENST00000535607 IGKV4-1P06312 121 aa4.37□□□□□ -1.71
USP28-202ENST00000535607 DEFB130BP0DP73 79 aa4.37□□□□□ -1.71
USP28-202ENST00000535607 DEFB130AP0DP74 79 aa4.37□□□□□ -1.71
USP28-202ENST00000535607 Q6ZRU5 148 aa4.37□□□□□ -1.71
USP28-202ENST00000535607 VWFP04275 2813 aa4.37□□□□□ -1.71
USP28-202ENST00000535607 hDV103S1A0JD37 113 aa4.36□□□□□ -1.71
USP28-202ENST00000535607 CLPSL2Q6UWE3 100 aa4.36□□□□□ -1.71
USP28-202ENST00000535607 SCXQ7RTU7 201 aa4.36□□□□□ -1.71
USP28-202ENST00000535607 CSNK1G2-AS1Q8NCQ2 148 aa4.36□□□□□ -1.71
USP28-202ENST00000535607 STAB1Q9NY15 2570 aa4.35□□□□□ -1.71
USP28-202ENST00000535607 ETDCA0A1B0GVM5 59 aa4.35□□□□□ -1.71
USP28-202ENST00000535607 EGFEM1PQ0D2K5 195 aa4.35□□□□□ -1.71
USP28-202ENST00000535607 CYP4F30PQ9H0H9 118 aa4.35□□□□□ -1.71
USP28-202ENST00000535607 DHRS4-AS1Q9P1J3 65 aa4.35□□□□□ -1.71
USP28-202ENST00000535607 LCE6AA0A183 80 aa4.34□□□□□ -1.71
USP28-202ENST00000535607 GIG44P09565 113 aaPredicted RBP4.34□□□□□ -1.71
USP28-202ENST00000535607 MP68P56378 58 aa4.34□□□□□ -1.71
USP28-202ENST00000535607 UBE2BP63146 152 aa4.34□□□□□ -1.71
USP28-202ENST00000535607 C9orf116Q5BN46 136 aaPredicted RBP4.34□□□□□ -1.71
USP28-202ENST00000535607 LELP1Q5T871 98 aa4.34□□□□□ -1.71
USP28-202ENST00000535607 UNQ6190/PRO20217Q6UXQ8 127 aa4.34□□□□□ -1.71
USP28-202ENST00000535607 CELA1Q9UNI1 258 aa4.34□□□□□ -1.71
USP28-202ENST00000535607 TRRAPQ9Y4A5 3859 aa4.34□□□□□ -1.72
USP28-202ENST00000535607 H3BPC8 53 aa4.33□□□□□ -1.72
USP28-202ENST00000535607 M0R2N4 97 aa4.33□□□□□ -1.72
USP28-202ENST00000535607 CD164Q04900 197 aa4.33□□□□□ -1.72
USP28-202ENST00000535607 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
USP28-202ENST00000535607 LIMD2Q9BT23 127 aa4.33□□□□□ -1.72
USP28-202ENST00000535607 HIGD2AQ9BW72 106 aa4.33□□□□□ -1.72
USP28-202ENST00000535607 WNK1Q9H4A3 2382 aa4.33□□□□□ -1.72
USP28-202ENST00000535607 IGLV10-54A0A075B6I4 117 aa4.32□□□□□ -1.72
USP28-202ENST00000535607 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
USP28-202ENST00000535607 UBE2AP49459 152 aa4.32□□□□□ -1.72
USP28-202ENST00000535607 MRPL55Q7Z7F7 128 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms