RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 Q6ZUT4 128 aa3.73□□□□□ -1.81
CPSF7-214ENST00000535222 FAM19A1Q7Z5A9 133 aa3.73□□□□□ -1.81
CPSF7-214ENST00000535222 SCGB1C1Q8TD33 95 aa3.73□□□□□ -1.81
CPSF7-214ENST00000535222 FAM104AQ969W3 186 aa3.73□□□□□ -1.81
CPSF7-214ENST00000535222 TRBV27A0A0K0K1C4 114 aa3.72□□□□□ -1.81
CPSF7-214ENST00000535222 F2Z2F3 143 aa3.72□□□□□ -1.81
CPSF7-214ENST00000535222 H0YIZ8 118 aa3.72□□□□□ -1.81
CPSF7-214ENST00000535222 M0R378 163 aa3.72□□□□□ -1.81
CPSF7-214ENST00000535222 FABP2P12104 132 aa3.72□□□□□ -1.81
CPSF7-214ENST00000535222 IFITM1P13164 125 aa3.72□□□□□ -1.81
CPSF7-214ENST00000535222 POLR2KP53803 58 aaKnown RBP3.72□□□□□ -1.81
CPSF7-214ENST00000535222 RNASE13Q5GAN3 156 aaKnown RBP3.72□□□□□ -1.81
CPSF7-214ENST00000535222 MEIG1Q5JSS6 88 aa3.72□□□□□ -1.81
CPSF7-214ENST00000535222 Q6ZVH6 145 aa3.72□□□□□ -1.81
CPSF7-214ENST00000535222 TIMM21Q9BVV7 248 aa3.72□□□□□ -1.81
CPSF7-214ENST00000535222 CNFNQ9BYD5 112 aa3.72□□□□□ -1.81
CPSF7-214ENST00000535222 RNASE7Q9H1E1 156 aaKnown RBP3.72□□□□□ -1.81
CPSF7-214ENST00000535222 ZNF706Q9Y5V0 76 aaPredicted RBP3.72□□□□□ -1.81
CPSF7-214ENST00000535222 TRAV9-1A0A075B6T8 112 aa3.71□□□□□ -1.82
CPSF7-214ENST00000535222 C1orf195Q5TG92 126 aa3.71□□□□□ -1.82
CPSF7-214ENST00000535222 FAM231DQ6ZW35 169 aa3.71□□□□□ -1.82
CPSF7-214ENST00000535222 LINC01561Q8N1V8 128 aa3.71□□□□□ -1.82
CPSF7-214ENST00000535222 PPP1R1CQ8WVI7 109 aa3.71□□□□□ -1.82
CPSF7-214ENST00000535222 BORCS7Q96B45 105 aa3.71□□□□□ -1.82
CPSF7-214ENST00000535222 SPCS1Q9Y6A9 102 aa3.71□□□□□ -1.82
CPSF7-214ENST00000535222 IGKV2-28A0A075B6P5 120 aa3.7□□□□□ -1.82
CPSF7-214ENST00000535222 A0A1B0GV50 99 aa3.7□□□□□ -1.82
CPSF7-214ENST00000535222 A0A1W2PPM0 123 aa3.7□□□□□ -1.82
CPSF7-214ENST00000535222 CCDC179H3BU77 68 aa3.7□□□□□ -1.82
CPSF7-214ENST00000535222 IGKV2D-28P01615 120 aa3.7□□□□□ -1.82
CPSF7-214ENST00000535222 SRP19P09132 144 aaKnown RBP3.7□□□□□ -1.82
CPSF7-214ENST00000535222 C18orf32Q8TCD1 76 aa3.7□□□□□ -1.82
CPSF7-214ENST00000535222 TMEM191AQ9H0A3 160 aa3.7□□□□□ -1.82
CPSF7-214ENST00000535222 ATP5LO75964 103 aa3.69□□□□□ -1.82
CPSF7-214ENST00000535222 VPREB1P12018 145 aa3.69□□□□□ -1.82
CPSF7-214ENST00000535222 CD164Q04900 197 aa3.69□□□□□ -1.82
CPSF7-214ENST00000535222 C4orf26Q17RF5 130 aa3.69□□□□□ -1.82
CPSF7-214ENST00000535222 SLC25A34Q6PIV7 304 aa3.69□□□□□ -1.82
CPSF7-214ENST00000535222 SPRR2EP22531 72 aa3.68□□□□□ -1.82
CPSF7-214ENST00000535222 SPRR2BP35325 72 aa3.68□□□□□ -1.82
CPSF7-214ENST00000535222 SPRR2AP35326 72 aa3.68□□□□□ -1.82
CPSF7-214ENST00000535222 KIAA1644Q3SXP7 199 aa3.68□□□□□ -1.82
CPSF7-214ENST00000535222 HIGD2AQ9BW72 106 aa3.68□□□□□ -1.82
CPSF7-214ENST00000535222 MANBALQ9NQG1 85 aa3.68□□□□□ -1.82
CPSF7-214ENST00000535222 NDUFC2O95298 119 aa3.67□□□□□ -1.82
CPSF7-214ENST00000535222 MT-ATP8P03928 68 aa3.67□□□□□ -1.82
CPSF7-214ENST00000535222 KRTDAPP60985 99 aa3.67□□□□□ -1.82
CPSF7-214ENST00000535222 SERF2P84101 59 aa3.67□□□□□ -1.82
CPSF7-214ENST00000535222 MOBPQ13875 183 aa3.67□□□□□ -1.82
CPSF7-214ENST00000535222 TRAPPC1Q9Y5R8 145 aa3.67□□□□□ -1.82
CPSF7-214ENST00000535222 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
CPSF7-214ENST00000535222 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
CPSF7-214ENST00000535222 H3BMG7 143 aa3.66□□□□□ -1.82
CPSF7-214ENST00000535222 DPM2O94777 84 aa3.66□□□□□ -1.82
CPSF7-214ENST00000535222 BAGE2Q86Y30 109 aa3.66□□□□□ -1.82
CPSF7-214ENST00000535222 ATOH7Q8N100 152 aa3.66□□□□□ -1.82
CPSF7-214ENST00000535222 NKAPP1Q8N9T2 125 aa3.66□□□□□ -1.82
CPSF7-214ENST00000535222 RAB37Q96AX2 223 aa3.66□□□□□ -1.82
CPSF7-214ENST00000535222 C20orf166-AS1Q96NR2 134 aa3.66□□□□□ -1.82
CPSF7-214ENST00000535222 NAA38Q9BRA0 125 aaKnown RBP3.66□□□□□ -1.82
CPSF7-214ENST00000535222 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
CPSF7-214ENST00000535222 A6NN06 94 aa3.65□□□□□ -1.83
CPSF7-214ENST00000535222 SYS1-DBNDD2H3BUS1 97 aa3.65□□□□□ -1.83
CPSF7-214ENST00000535222 H3BUT2 72 aa3.65□□□□□ -1.83
CPSF7-214ENST00000535222 UQCRQO14949 82 aa3.65□□□□□ -1.83
CPSF7-214ENST00000535222 SNCGO76070 127 aa3.65□□□□□ -1.83
CPSF7-214ENST00000535222 TMEM258P61165 79 aa3.65□□□□□ -1.83
CPSF7-214ENST00000535222 MRPS36P82909 103 aaKnown RBP3.65□□□□□ -1.83
CPSF7-214ENST00000535222 ZNF726P1Q15940 193 aa3.65□□□□□ -1.83
CPSF7-214ENST00000535222 RPL7L1Q6DKI1 246 aaKnown RBP3.65□□□□□ -1.83
CPSF7-214ENST00000535222 Q8IZM0 81 aa3.65□□□□□ -1.83
CPSF7-214ENST00000535222 PPDPFLQ8WWR9 84 aa3.65□□□□□ -1.83
CPSF7-214ENST00000535222 KRTAP3-1Q9BYR8 98 aa3.65□□□□□ -1.83
CPSF7-214ENST00000535222 F8VRH5 84 aa3.64□□□□□ -1.83
CPSF7-214ENST00000535222 SERF1AO75920 110 aa3.64□□□□□ -1.83
CPSF7-214ENST00000535222 C3orf79P0CE67 100 aa3.64□□□□□ -1.83
CPSF7-214ENST00000535222 TWIST1Q15672 202 aa3.64□□□□□ -1.83
CPSF7-214ENST00000535222 C6orf99Q4VX62 202 aa3.64□□□□□ -1.83
CPSF7-214ENST00000535222 BAGE3Q86Y29 109 aa3.64□□□□□ -1.83
CPSF7-214ENST00000535222 NRACQ8N912 160 aa3.64□□□□□ -1.83
CPSF7-214ENST00000535222 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
CPSF7-214ENST00000535222 IGLV9-49A0A0B4J1Y8 123 aa3.63□□□□□ -1.83
CPSF7-214ENST00000535222 VCYO14598 125 aa3.63□□□□□ -1.83
CPSF7-214ENST00000535222 NMUP48645 174 aa3.63□□□□□ -1.83
CPSF7-214ENST00000535222 HERVK_113P63121 156 aa3.63□□□□□ -1.83
CPSF7-214ENST00000535222 C9orf153Q5TBE3 101 aa3.63□□□□□ -1.83
CPSF7-214ENST00000535222 Q5XG85 94 aa3.63□□□□□ -1.83
CPSF7-214ENST00000535222 FAM19A3Q7Z5A8 133 aa3.63□□□□□ -1.83
CPSF7-214ENST00000535222 IMUPQ9GZP8 106 aa3.63□□□□□ -1.83
CPSF7-214ENST00000535222 LAMTOR3Q9UHA4 124 aa3.63□□□□□ -1.83
CPSF7-214ENST00000535222 CTXND1A0A1B0GTU2 59 aa3.62□□□□□ -1.83
CPSF7-214ENST00000535222 SMIM13P0DJ93 91 aa3.62□□□□□ -1.83
CPSF7-214ENST00000535222 COX8AP10176 69 aa3.62□□□□□ -1.83
CPSF7-214ENST00000535222 HBBP68871 147 aa3.62□□□□□ -1.83
CPSF7-214ENST00000535222 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
CPSF7-214ENST00000535222 HRCT1Q6UXD1 115 aa3.62□□□□□ -1.83
CPSF7-214ENST00000535222 TMEM136Q6ZRR5 245 aa3.62□□□□□ -1.83
CPSF7-214ENST00000535222 PRELID3AQ96N28 172 aa3.62□□□□□ -1.83
CPSF7-214ENST00000535222 C20orf78Q9BR46 151 aa3.62□□□□□ -1.83
CPSF7-214ENST00000535222 LIMD2Q9BT23 127 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms