RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 Q8N377 158 aa3.09□□□□□ -1.91
SNHG1-201ENST00000535076 LINC00304Q8N9R0 145 aa3.09□□□□□ -1.91
SNHG1-201ENST00000535076 DOPEY2Q9Y3R5 2298 aa3.08□□□□□ -1.92
SNHG1-201ENST00000535076 A0A1W2PNU3 283 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-201ENST00000535076 DEFB131AP59861 70 aa3.08□□□□□ -1.92
SNHG1-201ENST00000535076 WFDC13Q8IUB5 93 aa3.08□□□□□ -1.92
SNHG1-201ENST00000535076 USMG5Q96IX5 58 aa3.08□□□□□ -1.92
SNHG1-201ENST00000535076 CCL19Q99731 98 aa3.08□□□□□ -1.92
SNHG1-201ENST00000535076 MINOS1-NBL1R4GNA1 71 aa3.08□□□□□ -1.92
SNHG1-201ENST00000535076 REV3LO60673 3130 aa3.08□□□□□ -1.92
SNHG1-201ENST00000535076 LINC01565O15544 149 aa3.07□□□□□ -1.92
SNHG1-201ENST00000535076 LY6G6CO95867 125 aa3.07□□□□□ -1.92
SNHG1-201ENST00000535076 INSP01308 110 aa3.07□□□□□ -1.92
SNHG1-201ENST00000535076 WFDC10BQ8IUB3 73 aa3.07□□□□□ -1.92
SNHG1-201ENST00000535076 DEFB108BQ8NET1 73 aa3.07□□□□□ -1.92
SNHG1-201ENST00000535076 KRTAP11-1Q8IUC1 163 aa3.06□□□□□ -1.92
SNHG1-201ENST00000535076 Q96NJ1 140 aa3.06□□□□□ -1.92
SNHG1-201ENST00000535076 C6orf48Q9UBA6 75 aa3.06□□□□□ -1.92
SNHG1-201ENST00000535076 TRIOO75962 3097 aa3.06□□□□□ -1.92
SNHG1-201ENST00000535076 PRUNE2Q8WUY3 3088 aa3.06□□□□□ -1.92
SNHG1-201ENST00000535076 COL6A3P12111 3177 aa3.05□□□□□ -1.92
SNHG1-201ENST00000535076 A0A1B0GU33 70 aa3.05□□□□□ -1.92
SNHG1-201ENST00000535076 FAM168BA1KXE4 195 aa3.05□□□□□ -1.92
SNHG1-201ENST00000535076 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-201ENST00000535076 RHPN1-AS1Q9BWJ2 59 aa3.05□□□□□ -1.92
SNHG1-201ENST00000535076 NBDYA0A0U1RRE5 68 aa3.04□□□□□ -1.92
SNHG1-201ENST00000535076 PCOTHQ58A44 107 aa3.04□□□□□ -1.92
SNHG1-201ENST00000535076 ICE1Q9Y2F5 2266 aa3.04□□□□□ -1.92
SNHG1-201ENST00000535076 MMP24-AS1A0A0U1RRL7 71 aa3.03□□□□□ -1.92
SNHG1-201ENST00000535076 TECTAO75443 2155 aa3.02□□□□□ -1.93
SNHG1-201ENST00000535076 AHCTF1Q8WYP5 2266 aa3.02□□□□□ -1.93
SNHG1-201ENST00000535076 WNK2Q9Y3S1 2297 aa3.02□□□□□ -1.93
SNHG1-201ENST00000535076 SPINK13Q1W4C9 94 aa3.02□□□□□ -1.93
SNHG1-201ENST00000535076 CDH23Q9H251 3354 aa3.01□□□□□ -1.93
SNHG1-201ENST00000535076 A0A0G2JQZ4 141 aa3.01□□□□□ -1.93
SNHG1-201ENST00000535076 DEFB1P60022 68 aa3.01□□□□□ -1.93
SNHG1-201ENST00000535076 DEFB116Q30KQ4 102 aa3.01□□□□□ -1.93
SNHG1-201ENST00000535076 EYSQ5T1H1 3165 aa3□□□□□ -1.93
SNHG1-201ENST00000535076 SPTBN5Q9NRC6 3674 aaKnown RBP3□□□□□ -1.93
SNHG1-201ENST00000535076 A0A1W2PNN7 141 aa3□□□□□ -1.93
SNHG1-201ENST00000535076 CLPSL2Q6UWE3 100 aa3□□□□□ -1.93
SNHG1-201ENST00000535076 C5orf42Q9H799 3197 aa3□□□□□ -1.93
SNHG1-201ENST00000535076 UNC80Q8N2C7 3258 aa3□□□□□ -1.93
SNHG1-201ENST00000535076 ANKRD17O75179 2603 aaKnown RBP3□□□□□ -1.93
SNHG1-201ENST00000535076 Q6ZRX8 168 aa2.99□□□□□ -1.93
SNHG1-201ENST00000535076 C5orf56Q8N8D9 126 aa2.99□□□□□ -1.93
SNHG1-201ENST00000535076 ALMS1Q8TCU4 4167 aa2.98□□□□□ -1.93
SNHG1-201ENST00000535076 SPRR1AP35321 89 aa2.98□□□□□ -1.93
SNHG1-201ENST00000535076 DEFB109BQ30KR1 87 aa2.98□□□□□ -1.93
SNHG1-201ENST00000535076 VCANP13611 3396 aa2.98□□□□□ -1.93
SNHG1-201ENST00000535076 CACNA1HO95180 2353 aa2.97□□□□□ -1.93
SNHG1-201ENST00000535076 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
SNHG1-201ENST00000535076 SSBP3-AS1Q7Z2R9 100 aa2.97□□□□□ -1.93
SNHG1-201ENST00000535076 ZDBF2Q9HCK1 2354 aa2.97□□□□□ -1.93
SNHG1-201ENST00000535076 RIF1Q5UIP0 2472 aaKnown RBP2.96□□□□□ -1.94
SNHG1-201ENST00000535076 RPL37AP61513 92 aaKnown RBP2.96□□□□□ -1.94
SNHG1-201ENST00000535076 DEFB103AP81534 67 aa2.96□□□□□ -1.94
SNHG1-201ENST00000535076 KRTAP24-1Q3LI83 254 aa2.96□□□□□ -1.94
SNHG1-201ENST00000535076 IGFL1Q6UW32 110 aa2.96□□□□□ -1.94
SNHG1-201ENST00000535076 COX6B2Q6YFQ2 88 aa2.96□□□□□ -1.94
SNHG1-201ENST00000535076 XIRP2A4UGR9 3374 aa2.96□□□□□ -1.94
SNHG1-201ENST00000535076 CACNA1GO43497 2377 aa2.96□□□□□ -1.94
SNHG1-201ENST00000535076 ZNF292O60281 2723 aa2.96□□□□□ -1.94
SNHG1-201ENST00000535076 PIEZO1Q92508 2521 aa2.95□□□□□ -1.94
SNHG1-201ENST00000535076 SPTBN1Q01082 2364 aaKnown RBP2.95□□□□□ -1.94
SNHG1-201ENST00000535076 SPTBN4Q9H254 2564 aa2.95□□□□□ -1.94
SNHG1-201ENST00000535076 DEFB133Q30KQ1 61 aa2.95□□□□□ -1.94
SNHG1-201ENST00000535076 UNQ6190/PRO20217Q6UXQ8 127 aa2.95□□□□□ -1.94
SNHG1-201ENST00000535076 MRPL34Q9BQ48 92 aaKnown RBP2.95□□□□□ -1.94
SNHG1-201ENST00000535076 PSORS1C2Q9UIG4 136 aa2.95□□□□□ -1.94
SNHG1-201ENST00000535076 MUC6Q6W4X9 2439 aa2.95□□□□□ -1.94
SNHG1-201ENST00000535076 MUC3AQ02505 3323 aa2.95□□□□□ -1.94
SNHG1-201ENST00000535076 G3V318 75 aa2.94□□□□□ -1.94
SNHG1-201ENST00000535076 KRTAP13-3Q3SY46 172 aa2.94□□□□□ -1.94
SNHG1-201ENST00000535076 DEFB105AQ8NG35 78 aa2.94□□□□□ -1.94
SNHG1-201ENST00000535076 PRO2289Q9P1D8 64 aa2.94□□□□□ -1.94
SNHG1-201ENST00000535076 ZFHX2Q9C0A1 2572 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-201ENST00000535076 H3BUX3 64 aa2.93□□□□□ -1.94
SNHG1-201ENST00000535076 MT3P25713 68 aa2.93□□□□□ -1.94
SNHG1-201ENST00000535076 DEFB123Q8N688 67 aa2.93□□□□□ -1.94
SNHG1-201ENST00000535076 EP300Q09472 2414 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-201ENST00000535076 CNOT1A5YKK6 2376 aaKnown RBP2.93□□□□□ -1.94
SNHG1-201ENST00000535076 WNK1Q9H4A3 2382 aa2.93□□□□□ -1.94
SNHG1-201ENST00000535076 H0YAA0 97 aa2.92□□□□□ -1.94
SNHG1-201ENST00000535076 C16orf74Q96GX8 76 aa2.92□□□□□ -1.94
SNHG1-201ENST00000535076 PTPRZ1P23471 2315 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-201ENST00000535076 FRYLO94915 3013 aa2.91□□□□□ -1.94
SNHG1-201ENST00000535076 HTN1P15515 57 aa2.91□□□□□ -1.94
SNHG1-201ENST00000535076 SPRR1BP22528 89 aa2.91□□□□□ -1.94
SNHG1-201ENST00000535076 GPR179Q6PRD1 2367 aa2.9□□□□□ -1.94
SNHG1-201ENST00000535076 WDFY4Q6ZS81 3184 aa2.9□□□□□ -1.94
SNHG1-201ENST00000535076 GVINP1Q7Z2Y8 2422 aa2.9□□□□□ -1.94
SNHG1-201ENST00000535076 Q6ZSA8 131 aa2.9□□□□□ -1.95
SNHG1-201ENST00000535076 DEFB119Q8N690 84 aa2.9□□□□□ -1.95
SNHG1-201ENST00000535076 FAM186AA6NE01 2351 aa2.9□□□□□ -1.95
SNHG1-201ENST00000535076 CEP250Q9BV73 2442 aa2.9□□□□□ -1.95
SNHG1-201ENST00000535076 VPS13AQ96RL7 3174 aa2.89□□□□□ -1.95
SNHG1-201ENST00000535076 CACNA1BQ00975 2339 aa2.89□□□□□ -1.95
SNHG1-201ENST00000535076 TPRXLQ17RH7 258 aa2.89□□□□□ -1.95
SNHG1-201ENST00000535076 SPTBN2O15020 2390 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms