RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 PLEKHB2Q96CS7 222 aa5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST1H2BNQ99877 126 aa5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST1H2BMQ99879 126 aa5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 A0A087X002 238 aa5.3□□□□□ -1.56
CCDC90B-219ENST00000534753 LINC00587B1AMM8 73 aa5.3□□□□□ -1.56
CCDC90B-219ENST00000534753 J3QQQ9 107 aa5.3□□□□□ -1.56
CCDC90B-219ENST00000534753 M0R378 163 aa5.3□□□□□ -1.56
CCDC90B-219ENST00000534753 CRYGAP11844 174 aa5.3□□□□□ -1.56
CCDC90B-219ENST00000534753 TYMSOSQ8TAI1 123 aa5.3□□□□□ -1.56
CCDC90B-219ENST00000534753 HIGD2AQ9BW72 106 aa5.3□□□□□ -1.56
CCDC90B-219ENST00000534753 NPC2P61916 151 aa5.29□□□□□ -1.56
CCDC90B-219ENST00000534753 PRR4Q16378 134 aa5.29□□□□□ -1.56
CCDC90B-219ENST00000534753 KRTAP13-1Q8IUC0 172 aa5.28□□□□□ -1.56
CCDC90B-219ENST00000534753 MIEN1Q9BRT3 115 aa5.28□□□□□ -1.56
CCDC90B-219ENST00000534753 IGKV2D-26A0A0A0MRZ7 120 aa5.27□□□□□ -1.57
CCDC90B-219ENST00000534753 SYS1-DBNDD2H3BUS1 97 aa5.27□□□□□ -1.57
CCDC90B-219ENST00000534753 PET117Q6UWS5 81 aa5.27□□□□□ -1.57
CCDC90B-219ENST00000534753 TRBV10-3A0A0K0K1G6 114 aa5.26□□□□□ -1.57
CCDC90B-219ENST00000534753 ETDCA0A1B0GVM5 59 aa5.26□□□□□ -1.57
CCDC90B-219ENST00000534753 NMUP48645 174 aa5.26□□□□□ -1.57
CCDC90B-219ENST00000534753 KRTDAPP60985 99 aa5.26□□□□□ -1.57
CCDC90B-219ENST00000534753 S100A12P80511 92 aa5.26□□□□□ -1.57
CCDC90B-219ENST00000534753 UBR4Q5T4S7 5183 aa5.25□□□□□ -1.57
CCDC90B-219ENST00000534753 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
CCDC90B-219ENST00000534753 S100A7L2Q5SY68 101 aa5.25□□□□□ -1.57
CCDC90B-219ENST00000534753 A0A0J9YXY3 114 aa5.24□□□□□ -1.57
CCDC90B-219ENST00000534753 E9PLD3 99 aa5.24□□□□□ -1.57
CCDC90B-219ENST00000534753 C3orf79P0CE67 100 aa5.24□□□□□ -1.57
CCDC90B-219ENST00000534753 DDTP30046 118 aa5.24□□□□□ -1.57
CCDC90B-219ENST00000534753 PPDPFQ9H3Y8 114 aa5.24□□□□□ -1.57
CCDC90B-219ENST00000534753 A4D1N5 150 aa5.23□□□□□ -1.57
CCDC90B-219ENST00000534753 FAM229BQ4G0N7 80 aa5.23□□□□□ -1.57
CCDC90B-219ENST00000534753 ADAMTSL4-AS1Q5T5F5 129 aa5.23□□□□□ -1.57
CCDC90B-219ENST00000534753 LINC01545Q5VT33 79 aa5.23□□□□□ -1.57
CCDC90B-219ENST00000534753 C3orf22Q8N5N4 141 aa5.23□□□□□ -1.57
CCDC90B-219ENST00000534753 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
CCDC90B-219ENST00000534753 SMCR5Q8TEV8 140 aa5.23□□□□□ -1.57
CCDC90B-219ENST00000534753 KCNQ1DNQ9H478 68 aa5.23□□□□□ -1.57
CCDC90B-219ENST00000534753 ZNF815PA8K554 130 aa5.22□□□□□ -1.57
CCDC90B-219ENST00000534753 SOSTDC1Q6X4U4 206 aa5.22□□□□□ -1.57
CCDC90B-219ENST00000534753 SPRR4Q96PI1 79 aa5.22□□□□□ -1.57
CCDC90B-219ENST00000534753 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
CCDC90B-219ENST00000534753 TTTY13Q9BZ97 58 aa5.22□□□□□ -1.57
CCDC90B-219ENST00000534753 SPANXB1Q9NS25 103 aaPredicted RBP5.22□□□□□ -1.57
CCDC90B-219ENST00000534753 ATOH7Q8N100 152 aa5.21□□□□□ -1.58
CCDC90B-219ENST00000534753 LINC00337Q8N6G1 96 aa5.21□□□□□ -1.58
CCDC90B-219ENST00000534753 OR13C6PQ8NH95 151 aa5.21□□□□□ -1.58
CCDC90B-219ENST00000534753 ZNF706Q9Y5V0 76 aaPredicted RBP5.21□□□□□ -1.58
CCDC90B-219ENST00000534753 LRP2P98164 4655 aa5.21□□□□□ -1.58
CCDC90B-219ENST00000534753 LOC107984156A0A0G2JMH3 177 aa5.2□□□□□ -1.58
CCDC90B-219ENST00000534753 TRBV10-2A0A0K0K1G8 114 aa5.2□□□□□ -1.58
CCDC90B-219ENST00000534753 C20orf202A1L168 122 aa5.2□□□□□ -1.58
CCDC90B-219ENST00000534753 ARL17AQ8IVW1 177 aa5.2□□□□□ -1.58
CCDC90B-219ENST00000534753 TRAV23DV6A0A075B6W5 121 aa5.19□□□□□ -1.58
CCDC90B-219ENST00000534753 NDUFC2O95298 119 aa5.19□□□□□ -1.58
CCDC90B-219ENST00000534753 SPRR1AP35321 89 aa5.19□□□□□ -1.58
CCDC90B-219ENST00000534753 Q8N9P0 234 aaPredicted RBP5.19□□□□□ -1.58
CCDC90B-219ENST00000534753 LINC00308Q8TCZ7 52 aa5.19□□□□□ -1.58
CCDC90B-219ENST00000534753 IGLV9-49A0A0B4J1Y8 123 aa5.18□□□□□ -1.58
CCDC90B-219ENST00000534753 KRTAP4-16G5E9R7 235 aaPredicted RBP5.18□□□□□ -1.58
CCDC90B-219ENST00000534753 ERC2-IT1O76042 136 aa5.18□□□□□ -1.58
CCDC90B-219ENST00000534753 IGLV6-57P01721 117 aa5.18□□□□□ -1.58
CCDC90B-219ENST00000534753 COA6Q5JTJ3 125 aaKnown RBP5.18□□□□□ -1.58
CCDC90B-219ENST00000534753 SCGB1D4Q6XE38 83 aa5.18□□□□□ -1.58
CCDC90B-219ENST00000534753 LPAP08519 4548 aa5.18□□□□□ -1.58
CCDC90B-219ENST00000534753 ZNF73O43830 326 aaPredicted RBP5.17□□□□□ -1.58
CCDC90B-219ENST00000534753 S100A2P29034 98 aa5.17□□□□□ -1.58
CCDC90B-219ENST00000534753 Q6ZRX8 168 aa5.17□□□□□ -1.58
CCDC90B-219ENST00000534753 Q8NBF4 154 aa5.17□□□□□ -1.58
CCDC90B-219ENST00000534753 LITAFQ99732 161 aa5.17□□□□□ -1.58
CCDC90B-219ENST00000534753 Q9BRP9 147 aa5.17□□□□□ -1.58
CCDC90B-219ENST00000534753 TIMM17BO60830 172 aa5.16□□□□□ -1.58
CCDC90B-219ENST00000534753 HINT1P49773 126 aaPredicted RBP5.16□□□□□ -1.58
CCDC90B-219ENST00000534753 JOSD1Q15040 202 aaPredicted RBP5.16□□□□□ -1.58
CCDC90B-219ENST00000534753 SPANXCQ9NY87 97 aa5.16□□□□□ -1.58
CCDC90B-219ENST00000534753 C5orf52A6NGY3 159 aa5.15□□□□□ -1.59
CCDC90B-219ENST00000534753 S100A1P23297 94 aa5.15□□□□□ -1.59
CCDC90B-219ENST00000534753 MOBPQ13875 183 aa5.15□□□□□ -1.59
CCDC90B-219ENST00000534753 S100A6P06703 90 aa5.14□□□□□ -1.59
CCDC90B-219ENST00000534753 C9orf153Q5TBE3 101 aa5.14□□□□□ -1.59
CCDC90B-219ENST00000534753 PCP2Q8IVA1 136 aa5.14□□□□□ -1.59
CCDC90B-219ENST00000534753 ST20-AS1Q8NBB2 130 aa5.14□□□□□ -1.59
CCDC90B-219ENST00000534753 IGLV7-46A0A075B6I9 117 aa5.13□□□□□ -1.59
CCDC90B-219ENST00000534753 SPAG11AQ6PDA7 123 aa5.13□□□□□ -1.59
CCDC90B-219ENST00000534753 HIST3H2BBQ8N257 126 aa5.13□□□□□ -1.59
CCDC90B-219ENST00000534753 CBY1Q9Y3M2 126 aa5.13□□□□□ -1.59
CCDC90B-219ENST00000534753 IGKV2D-30A0A075B6S6 120 aa5.12□□□□□ -1.59
CCDC90B-219ENST00000534753 A6NDN8 102 aa5.12□□□□□ -1.59
CCDC90B-219ENST00000534753 LINC00483Q53H64 154 aa5.12□□□□□ -1.59
CCDC90B-219ENST00000534753 MUSTN1Q8IVN3 82 aa5.12□□□□□ -1.59
CCDC90B-219ENST00000534753 LINC00518Q8N0U6 118 aa5.12□□□□□ -1.59
CCDC90B-219ENST00000534753 HIST1H2BLQ99880 126 aa5.12□□□□□ -1.59
CCDC90B-219ENST00000534753 SPANXDQ9BXN6 97 aa5.12□□□□□ -1.59
CCDC90B-219ENST00000534753 HSBP1L1C9JCN9 74 aa5.11□□□□□ -1.59
CCDC90B-219ENST00000534753 COX7BP24311 80 aa5.11□□□□□ -1.59
CCDC90B-219ENST00000534753 AKR1D1P51857 326 aa5.11□□□□□ -1.59
CCDC90B-219ENST00000534753 C6orf99Q4VX62 202 aa5.11□□□□□ -1.59
CCDC90B-219ENST00000534753 DEFB105AQ8NG35 78 aa5.11□□□□□ -1.59
CCDC90B-219ENST00000534753 COPS9Q8WXC6 57 aa5.11□□□□□ -1.59
CCDC90B-219ENST00000534753 RNF213Q63HN8 5207 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms