RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 DEFB124Q8NES8 71 aa1.69□□□□□ -2.14
ATPAF1-211ENST00000534216 ASXL3Q9C0F0 2248 aa1.68□□□□□ -2.14
ATPAF1-211ENST00000534216 PCNTO95613 3336 aa1.68□□□□□ -2.14
ATPAF1-211ENST00000534216 POLR2KP53803 58 aaKnown RBP1.68□□□□□ -2.14
ATPAF1-211ENST00000534216 RPL39P62891 51 aaKnown RBP1.68□□□□□ -2.14
ATPAF1-211ENST00000534216 DEFB109BQ30KR1 87 aa1.68□□□□□ -2.14
ATPAF1-211ENST00000534216 U3KQA8 63 aa1.68□□□□□ -2.14
ATPAF1-211ENST00000534216 ABCA1O95477 2261 aa1.67□□□□□ -2.14
ATPAF1-211ENST00000534216 A0A096LNT2 108 aa1.67□□□□□ -2.14
ATPAF1-211ENST00000534216 NBDYA0A0U1RRE5 68 aa1.67□□□□□ -2.14
ATPAF1-211ENST00000534216 COX7BP24311 80 aa1.67□□□□□ -2.14
ATPAF1-211ENST00000534216 LINC00158P58513 81 aa1.67□□□□□ -2.14
ATPAF1-211ENST00000534216 RPL39LQ96EH5 51 aaKnown RBP1.67□□□□□ -2.14
ATPAF1-211ENST00000534216 Q96NJ1 140 aa1.67□□□□□ -2.14
ATPAF1-211ENST00000534216 ALMS1Q8TCU4 4167 aa1.67□□□□□ -2.14
ATPAF1-211ENST00000534216 CNTRLQ7Z7A1 2325 aa1.67□□□□□ -2.14
ATPAF1-211ENST00000534216 ANKRD17O75179 2603 aaKnown RBP1.67□□□□□ -2.14
ATPAF1-211ENST00000534216 HTTP42858 3142 aa1.66□□□□□ -2.14
ATPAF1-211ENST00000534216 A0A1W2PNN7 141 aa1.66□□□□□ -2.14
ATPAF1-211ENST00000534216 PRCDQ00LT1 54 aa1.66□□□□□ -2.14
ATPAF1-211ENST00000534216 PRB3Q04118 309 aaPredicted RBP1.66□□□□□ -2.14
ATPAF1-211ENST00000534216 ZFHX2Q9C0A1 2572 aaPredicted RBP1.66□□□□□ -2.14
ATPAF1-211ENST00000534216 CENPFP49454 3210 aa1.66□□□□□ -2.14
ATPAF1-211ENST00000534216 OTOGLQ3ZCN5 2332 aa1.66□□□□□ -2.14
ATPAF1-211ENST00000534216 KNL1Q8NG31 2342 aa1.66□□□□□ -2.14
ATPAF1-211ENST00000534216 PLCE1Q9P212 2302 aa1.66□□□□□ -2.14
ATPAF1-211ENST00000534216 BRCA2P51587 3418 aa1.65□□□□□ -2.14
ATPAF1-211ENST00000534216 DNAH12Q6ZR08 3092 aa1.64□□□□□ -2.15
ATPAF1-211ENST00000534216 TRGV1A0A0A0MS02 117 aa1.64□□□□□ -2.15
ATPAF1-211ENST00000534216 HRES1P13985 223 aa1.64□□□□□ -2.15
ATPAF1-211ENST00000534216 Q6ZQY7 126 aa1.64□□□□□ -2.15
ATPAF1-211ENST00000534216 BRWD1Q9NSI6 2320 aa1.64□□□□□ -2.15
ATPAF1-211ENST00000534216 CNOT1A5YKK6 2376 aaKnown RBP1.63□□□□□ -2.15
ATPAF1-211ENST00000534216 IGKV2-40A0A087WW87 121 aaPredicted RBP1.63□□□□□ -2.15
ATPAF1-211ENST00000534216 A0A1B0GU69 56 aa1.63□□□□□ -2.15
ATPAF1-211ENST00000534216 H3BRN7 92 aa1.63□□□□□ -2.15
ATPAF1-211ENST00000534216 I3L2K1 104 aa1.63□□□□□ -2.15
ATPAF1-211ENST00000534216 IGKV2D-40P01614 121 aaPredicted RBP1.63□□□□□ -2.15
ATPAF1-211ENST00000534216 IGLV6-57P01721 117 aa1.63□□□□□ -2.15
ATPAF1-211ENST00000534216 LINC00575Q6W349 94 aa1.63□□□□□ -2.15
ATPAF1-211ENST00000534216 LEAP2Q969E1 77 aa1.63□□□□□ -2.15
ATPAF1-211ENST00000534216 CEP350Q5VT06 3117 aa1.62□□□□□ -2.15
ATPAF1-211ENST00000534216 NAV3Q8IVL0 2385 aa1.62□□□□□ -2.15
ATPAF1-211ENST00000534216 DEFB131BA0A096LNP1 70 aa1.62□□□□□ -2.15
ATPAF1-211ENST00000534216 C5orf56Q8N8D9 126 aa1.62□□□□□ -2.15
ATPAF1-211ENST00000534216 PRO2289Q9P1D8 64 aa1.62□□□□□ -2.15
ATPAF1-211ENST00000534216 CDKN2A-AS1Q9UH64 79 aa1.62□□□□□ -2.15
ATPAF1-211ENST00000534216 ICE1Q9Y2F5 2266 aa1.62□□□□□ -2.15
ATPAF1-211ENST00000534216 COL6A6A6NMZ7 2263 aa1.61□□□□□ -2.15
ATPAF1-211ENST00000534216 SPTBN5Q9NRC6 3674 aaKnown RBP1.61□□□□□ -2.15
ATPAF1-211ENST00000534216 MKI67P46013 3256 aaKnown RBP1.61□□□□□ -2.15
ATPAF1-211ENST00000534216 COX17Q14061 63 aa1.61□□□□□ -2.15
ATPAF1-211ENST00000534216 Q8IZM0 81 aa1.61□□□□□ -2.15
ATPAF1-211ENST00000534216 CCL19Q99731 98 aa1.6□□□□□ -2.15
ATPAF1-211ENST00000534216 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.6□□□□□ -2.155e-6■■■■□ 22.8
ATPAF1-211ENST00000534216 XIRP2A4UGR9 3374 aa1.59□□□□□ -2.15
ATPAF1-211ENST00000534216 RPL37AP61513 92 aaKnown RBP1.59□□□□□ -2.15
ATPAF1-211ENST00000534216 COX6A2Q02221 97 aa1.59□□□□□ -2.15
ATPAF1-211ENST00000534216 TPRXLQ17RH7 258 aa1.59□□□□□ -2.15
ATPAF1-211ENST00000534216 DEFB108BQ8NET1 73 aa1.59□□□□□ -2.15
ATPAF1-211ENST00000534216 SPACA4Q8TDM5 124 aa1.59□□□□□ -2.15
ATPAF1-211ENST00000534216 A0A0G2JQZ4 141 aa1.58□□□□□ -2.16
ATPAF1-211ENST00000534216 K7EQZ3 153 aa1.58□□□□□ -2.16
ATPAF1-211ENST00000534216 M0QY20 66 aa1.58□□□□□ -2.16
ATPAF1-211ENST00000534216 WT1-ASQ06250 92 aa1.58□□□□□ -2.16
ATPAF1-211ENST00000534216 TMEM167AQ8TBQ9 72 aa1.58□□□□□ -2.16
ATPAF1-211ENST00000534216 R4GN34 69 aa1.58□□□□□ -2.16
ATPAF1-211ENST00000534216 LAMA3Q16787 3333 aa1.58□□□□□ -2.16
ATPAF1-211ENST00000534216 CHD7Q9P2D1 2997 aa1.58□□□□□ -2.16
ATPAF1-211ENST00000534216 CDH23Q9H251 3354 aa1.58□□□□□ -2.16
ATPAF1-211ENST00000534216 CHD9Q3L8U1 2897 aa1.57□□□□□ -2.16
ATPAF1-211ENST00000534216 DEFB108AA8MXU0 73 aa1.57□□□□□ -2.16
ATPAF1-211ENST00000534216 G3V318 75 aa1.57□□□□□ -2.16
ATPAF1-211ENST00000534216 RPL39P5Q59GN2 51 aa1.57□□□□□ -2.16
ATPAF1-211ENST00000534216 PSORS1C2Q9UIG4 136 aa1.57□□□□□ -2.16
ATPAF1-211ENST00000534216 SZT2Q5T011 3432 aa1.56□□□□□ -2.16
ATPAF1-211ENST00000534216 FN1P02751 2386 aaKnown RBP1.56□□□□□ -2.16
ATPAF1-211ENST00000534216 RANBP2P49792 3224 aaKnown RBP1.56□□□□□ -2.16
ATPAF1-211ENST00000534216 LY6G6CO95867 125 aa1.56□□□□□ -2.16
ATPAF1-211ENST00000534216 ANGP03950 147 aaKnown RBP1.56□□□□□ -2.16
ATPAF1-211ENST00000534216 ACYP2P14621 99 aa1.56□□□□□ -2.16
ATPAF1-211ENST00000534216 DEFB104AQ8WTQ1 72 aa1.56□□□□□ -2.16
ATPAF1-211ENST00000534216 C4orf3Q8WVX3 66 aa1.56□□□□□ -2.16
ATPAF1-211ENST00000534216 IGLV5-48A0A075B6I7 105 aa1.55□□□□□ -2.16
ATPAF1-211ENST00000534216 SSBP3-AS1Q7Z2R9 100 aa1.55□□□□□ -2.16
ATPAF1-211ENST00000534216 CRIPTQ9P021 101 aa1.55□□□□□ -2.16
ATPAF1-211ENST00000534216 KAAG1Q9UBP8 84 aa1.55□□□□□ -2.16
ATPAF1-211ENST00000534216 IGF2RP11717 2491 aa1.55□□□□□ -2.16
ATPAF1-211ENST00000534216 LAMA2P24043 3122 aaKnown RBP1.54□□□□□ -2.16
ATPAF1-211ENST00000534216 UNC80Q8N2C7 3258 aa1.54□□□□□ -2.16
ATPAF1-211ENST00000534216 LYNX1G3V0Z9 82 aa1.54□□□□□ -2.16
ATPAF1-211ENST00000534216 LYNX1P0DP58 116 aa1.54□□□□□ -2.16
ATPAF1-211ENST00000534216 PCOTHQ58A44 107 aa1.54□□□□□ -2.16
ATPAF1-211ENST00000534216 MINOS1Q5TGZ0 78 aa1.54□□□□□ -2.16
ATPAF1-211ENST00000534216 WFDC13Q8IUB5 93 aa1.54□□□□□ -2.16
ATPAF1-211ENST00000534216 CEP290O15078 2479 aa1.53□□□□□ -2.16
ATPAF1-211ENST00000534216 CACNA1EQ15878 2313 aa1.53□□□□□ -2.16
ATPAF1-211ENST00000534216 C10orf55Q5SWW7 151 aa1.53□□□□□ -2.16
ATPAF1-211ENST00000534216 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.53□□□□□ -2.16
ATPAF1-211ENST00000534216 MUC6Q6W4X9 2439 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms