RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 KRTAP4-16G5E9R7 235 aaPredicted RBP11.89□□□□□ -0.51
SSH3-211ENST00000534112 SNRPEP62304 92 aaKnown RBP11.89□□□□□ -0.51
SSH3-211ENST00000534112 ETDCA0A1B0GVM5 59 aa11.88□□□□□ -0.51
SSH3-211ENST00000534112 LGALS3P17931 250 aaKnown RBP11.88□□□□□ -0.51
SSH3-211ENST00000534112 NMUP48645 174 aa11.88□□□□□ -0.51
SSH3-211ENST00000534112 C5orf52A6NGY3 159 aa11.87□□□□□ -0.51
SSH3-211ENST00000534112 NCR3O14931 201 aa11.87□□□□□ -0.51
SSH3-211ENST00000534112 GAGE2AQ6NT46 116 aa11.87□□□□□ -0.51
SSH3-211ENST00000534112 Q8N377 158 aa11.87□□□□□ -0.51
SSH3-211ENST00000534112 SMIM13P0DJ93 91 aa11.86□□□□□ -0.51
SSH3-211ENST00000534112 MEIG1Q5JSS6 88 aa11.86□□□□□ -0.51
SSH3-211ENST00000534112 RPS29P62273 56 aaKnown RBP11.85□□□□□ -0.51
SSH3-211ENST00000534112 MOBPQ13875 183 aa11.85□□□□□ -0.51
SSH3-211ENST00000534112 IGLV9-49A0A0B4J1Y8 123 aa11.84□□□□□ -0.51
SSH3-211ENST00000534112 LINC00587B1AMM8 73 aa11.84□□□□□ -0.51
SSH3-211ENST00000534112 SSBP3-AS1Q7Z2R9 100 aa11.84□□□□□ -0.51
SSH3-211ENST00000534112 TRBV10-3A0A0K0K1G6 114 aa11.83□□□□□ -0.52
SSH3-211ENST00000534112 AKR1D1P51857 326 aa11.83□□□□□ -0.52
SSH3-211ENST00000534112 XP32Q5T750 250 aa11.83□□□□□ -0.52
SSH3-211ENST00000534112 MIR7-3HGQ8N6C7 128 aa11.83□□□□□ -0.52
SSH3-211ENST00000534112 SLC25A20O43772 301 aa11.82□□□□□ -0.52
SSH3-211ENST00000534112 ATOH7Q8N100 152 aa11.82□□□□□ -0.52
SSH3-211ENST00000534112 ERC2-IT1O76042 136 aa11.81□□□□□ -0.52
SSH3-211ENST00000534112 LCE2CQ5TA81 110 aa11.81□□□□□ -0.52
SSH3-211ENST00000534112 B5MCH6 92 aa11.8□□□□□ -0.52
SSH3-211ENST00000534112 A0A0J9YXY3 114 aa11.78□□□□□ -0.52
SSH3-211ENST00000534112 ANKRD39Q53RE8 183 aa11.78□□□□□ -0.52
SSH3-211ENST00000534112 S100A12P80511 92 aa11.77□□□□□ -0.53
SSH3-211ENST00000534112 TTTY13Q9BZ97 58 aa11.77□□□□□ -0.53
SSH3-211ENST00000534112 ZNF815PA8K554 130 aa11.75□□□□□ -0.53
SSH3-211ENST00000534112 Q9BRP9 147 aa11.75□□□□□ -0.53
SSH3-211ENST00000534112 LOC107984156A0A0G2JMH3 177 aa11.74□□□□□ -0.53
SSH3-211ENST00000534112 ARL17AQ8IVW1 177 aa11.74□□□□□ -0.53
SSH3-211ENST00000534112 KRTAP19-2Q3LHN2 52 aa11.73□□□□□ -0.53
SSH3-211ENST00000534112 DDTP30046 118 aa11.72□□□□□ -0.53
SSH3-211ENST00000534112 ADAMTSL4-AS1Q5T5F5 129 aa11.72□□□□□ -0.53
SSH3-211ENST00000534112 Q6ZRX8 168 aa11.72□□□□□ -0.53
SSH3-211ENST00000534112 TIMM17BO60830 172 aa11.71□□□□□ -0.53
SSH3-211ENST00000534112 LITAFQ99732 161 aa11.71□□□□□ -0.53
SSH3-211ENST00000534112 TRBV10-2A0A0K0K1G8 114 aa11.69□□□□□ -0.54
SSH3-211ENST00000534112 SCGB1D1O95968 90 aa11.69□□□□□ -0.54
SSH3-211ENST00000534112 MT1HP80294 61 aa11.69□□□□□ -0.54
SSH3-211ENST00000534112 C9orf153Q5TBE3 101 aa11.68□□□□□ -0.54
SSH3-211ENST00000534112 SOSTDC1Q6X4U4 206 aa11.68□□□□□ -0.54
SSH3-211ENST00000534112 PCP2Q8IVA1 136 aa11.68□□□□□ -0.54
SSH3-211ENST00000534112 MIEN1Q9BRT3 115 aa11.68□□□□□ -0.54
SSH3-211ENST00000534112 HSBP1L1C9JCN9 74 aa11.67□□□□□ -0.54
SSH3-211ENST00000534112 TMA7Q9Y2S6 64 aaKnown RBP11.67□□□□□ -0.54
SSH3-211ENST00000534112 EIF4EBP3O60516 100 aaPredicted RBP11.66□□□□□ -0.54
SSH3-211ENST00000534112 NPC2P61916 151 aa11.66□□□□□ -0.54
SSH3-211ENST00000534112 SCGB1D4Q6XE38 83 aa11.65□□□□□ -0.54
SSH3-211ENST00000534112 NDUFC2O95298 119 aa11.64□□□□□ -0.55
SSH3-211ENST00000534112 PCOTHQ58A44 107 aa11.64□□□□□ -0.55
SSH3-211ENST00000534112 LINC00308Q8TCZ7 52 aa11.64□□□□□ -0.55
SSH3-211ENST00000534112 SPANXB1Q9NS25 103 aaPredicted RBP11.64□□□□□ -0.55
SSH3-211ENST00000534112 IGLV6-57P01721 117 aa11.63□□□□□ -0.55
SSH3-211ENST00000534112 CFC1BP0CG36 223 aa11.63□□□□□ -0.55
SSH3-211ENST00000534112 IGLV8-61A0A075B6I0 122 aa11.62□□□□□ -0.55
SSH3-211ENST00000534112 JOSD1Q15040 202 aaPredicted RBP11.62□□□□□ -0.55
SSH3-211ENST00000534112 SPANXDQ9BXN6 97 aa11.62□□□□□ -0.55
SSH3-211ENST00000534112 SPANXCQ9NY87 97 aa11.62□□□□□ -0.55
SSH3-211ENST00000534112 S100A7L2Q5SY68 101 aa11.61□□□□□ -0.55
SSH3-211ENST00000534112 ST20-AS1Q8NBB2 130 aa11.61□□□□□ -0.55
SSH3-211ENST00000534112 TRAV23DV6A0A075B6W5 121 aa11.59□□□□□ -0.55
SSH3-211ENST00000534112 ZNF73O43830 326 aaPredicted RBP11.57□□□□□ -0.56
SSH3-211ENST00000534112 C9orf92A6NGG3 77 aa11.56□□□□□ -0.56
SSH3-211ENST00000534112 Q6ZVH6 145 aa11.56□□□□□ -0.56
SSH3-211ENST00000534112 IFITM1P13164 125 aa11.55□□□□□ -0.56
SSH3-211ENST00000534112 LORP23490 312 aaPredicted RBP11.55□□□□□ -0.56
SSH3-211ENST00000534112 LIMD2Q9BT23 127 aa11.55□□□□□ -0.56
SSH3-211ENST00000534112 HRCT1Q6UXD1 115 aa11.54□□□□□ -0.56
SSH3-211ENST00000534112 COX8AP10176 69 aa11.53□□□□□ -0.56
SSH3-211ENST00000534112 KRTAP10-6P60371 365 aaPredicted RBP11.53□□□□□ -0.56
SSH3-211ENST00000534112 COPS9Q8WXC6 57 aa11.53□□□□□ -0.56
SSH3-211ENST00000534112 PAM16Q9Y3D7 125 aa11.53□□□□□ -0.56
SSH3-211ENST00000534112 SPATA45Q537H7 98 aa11.52□□□□□ -0.57
SSH3-211ENST00000534112 PYY3Q5JQD4 70 aa11.52□□□□□ -0.57
SSH3-211ENST00000534112 VAMP8Q9BV40 100 aa11.52□□□□□ -0.57
SSH3-211ENST00000534112 MUSTN1Q8IVN3 82 aa11.51□□□□□ -0.57
SSH3-211ENST00000534112 DLEU1O43261 78 aa11.5□□□□□ -0.57
SSH3-211ENST00000534112 SPRR1BP22528 89 aa11.5□□□□□ -0.57
SSH3-211ENST00000534112 HINT1P49773 126 aaPredicted RBP11.5□□□□□ -0.57
SSH3-211ENST00000534112 LINC00518Q8N0U6 118 aa11.49□□□□□ -0.57
SSH3-211ENST00000534112 SLC25A34Q6PIV7 304 aa11.48□□□□□ -0.57
SSH3-211ENST00000534112 C14orf144Q96I85 54 aa11.47□□□□□ -0.57
SSH3-211ENST00000534112 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.57
SSH3-211ENST00000534112 CBY1Q9Y3M2 126 aa11.46□□□□□ -0.57
SSH3-211ENST00000534112 LAMTOR3Q9UHA4 124 aa11.45□□□□□ -0.58
SSH3-211ENST00000534112 M0R2T5 61 aa11.44□□□□□ -0.58
SSH3-211ENST00000534112 DHRS4-AS1Q9P1J3 65 aa11.43□□□□□ -0.58
SSH3-211ENST00000534112 HIGD1BQ9P298 99 aa11.41□□□□□ -0.58
SSH3-211ENST00000534112 CD164Q04900 197 aa11.4□□□□□ -0.58
SSH3-211ENST00000534112 HIST1H4GQ99525 98 aa11.4□□□□□ -0.58
SSH3-211ENST00000534112 C2orf91Q6ZV80 131 aa11.39□□□□□ -0.59
SSH3-211ENST00000534112 FLGP20930 4061 aaPredicted RBP11.39□□□□□ -0.59
SSH3-211ENST00000534112 A4D1N5 150 aa11.38□□□□□ -0.59
SSH3-211ENST00000534112 TRAV13-2A0A0B4J235 113 aa11.37□□□□□ -0.59
SSH3-211ENST00000534112 A6NDN8 102 aa11.37□□□□□ -0.59
SSH3-211ENST00000534112 H7C2G1 150 aa11.37□□□□□ -0.59
SSH3-211ENST00000534112 Q1RN00 199 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms