RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 COA5Q86WW8 74 aa4.69□□□□□ -1.66
CTNND1-236ENST00000533667 PRR34Q9NV39 138 aa4.68□□□□□ -1.66
CTNND1-236ENST00000533667 PCSK5Q92824 1860 aa4.68□□□□□ -1.66
CTNND1-236ENST00000533667 KRTAP24-1Q3LI83 254 aa4.68□□□□□ -1.66
CTNND1-236ENST00000533667 MRPL34Q9BQ48 92 aaKnown RBP4.68□□□□□ -1.66
CTNND1-236ENST00000533667 TYMSOSQ8TAI1 123 aa4.68□□□□□ -1.66
CTNND1-236ENST00000533667 PKD1L2Q7Z442 2459 aa4.67□□□□□ -1.66
CTNND1-236ENST00000533667 PLA2G2DQ9UNK4 145 aa4.67□□□□□ -1.66
CTNND1-236ENST00000533667 LINC00612Q8N6U2 182 aa4.66□□□□□ -1.66
CTNND1-236ENST00000533667 SPANXA2-OT1Q8N9U9 137 aa4.66□□□□□ -1.66
CTNND1-236ENST00000533667 CEP295Q9C0D2 2601 aa4.66□□□□□ -1.66
CTNND1-236ENST00000533667 K7EQZ3 153 aa4.66□□□□□ -1.66
CTNND1-236ENST00000533667 FP248Q71RG6 208 aaPredicted RBP4.66□□□□□ -1.66
CTNND1-236ENST00000533667 RPL37AP61513 92 aaKnown RBP4.66□□□□□ -1.66
CTNND1-236ENST00000533667 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
CTNND1-236ENST00000533667 Q75L30 129 aa4.66□□□□□ -1.66
CTNND1-236ENST00000533667 TLX1NBP0CAT3 122 aa4.65□□□□□ -1.66
CTNND1-236ENST00000533667 DMDP11532 3685 aa4.65□□□□□ -1.66
CTNND1-236ENST00000533667 SETD2Q9BYW2 2564 aaPredicted RBP4.65□□□□□ -1.67
CTNND1-236ENST00000533667 WDR87Q6ZQQ6 2873 aa4.65□□□□□ -1.67
CTNND1-236ENST00000533667 RANBP2P49792 3224 aaKnown RBP4.65□□□□□ -1.67
CTNND1-236ENST00000533667 ASB16-AS1Q495Z4 193 aa4.64□□□□□ -1.67
CTNND1-236ENST00000533667 CHD9Q3L8U1 2897 aa4.64□□□□□ -1.67
CTNND1-236ENST00000533667 EIF4EBP3O60516 100 aaPredicted RBP4.64□□□□□ -1.67
CTNND1-236ENST00000533667 IGFL1Q6UW32 110 aa4.64□□□□□ -1.67
CTNND1-236ENST00000533667 SSBP3-AS1Q7Z2R9 100 aa4.64□□□□□ -1.67
CTNND1-236ENST00000533667 TRANK1O15050 2925 aa4.63□□□□□ -1.67
CTNND1-236ENST00000533667 CHTF8P0CG12 524 aa4.63□□□□□ -1.67
CTNND1-236ENST00000533667 FAM168BA1KXE4 195 aa4.63□□□□□ -1.67
CTNND1-236ENST00000533667 C15orf56Q8N910 161 aa4.63□□□□□ -1.67
CTNND1-236ENST00000533667 C19orf73Q9NVV2 129 aa4.63□□□□□ -1.67
CTNND1-236ENST00000533667 Q96NJ1 140 aa4.63□□□□□ -1.67
CTNND1-236ENST00000533667 WDFY3Q8IZQ1 3526 aa4.63□□□□□ -1.67
CTNND1-236ENST00000533667 C8orf17Q9NRJ1 99 aa4.62□□□□□ -1.67
CTNND1-236ENST00000533667 WWC2-AS2Q96NR7 200 aa4.62□□□□□ -1.67
CTNND1-236ENST00000533667 CHD7Q9P2D1 2997 aa4.62□□□□□ -1.67
CTNND1-236ENST00000533667 A0A096LNT2 108 aa4.62□□□□□ -1.67
CTNND1-236ENST00000533667 Q8N377 158 aa4.62□□□□□ -1.67
CTNND1-236ENST00000533667 ZNF462Q96JM2 2506 aa4.61□□□□□ -1.67
CTNND1-236ENST00000533667 A0A1B0GVX0 72 aa4.61□□□□□ -1.67
CTNND1-236ENST00000533667 UNC80Q8N2C7 3258 aa4.61□□□□□ -1.67
CTNND1-236ENST00000533667 GIG44P09565 113 aaPredicted RBP4.61□□□□□ -1.67
CTNND1-236ENST00000533667 ZNF861PO60384 105 aa4.6□□□□□ -1.67
CTNND1-236ENST00000533667 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
CTNND1-236ENST00000533667 PLA2G1BP04054 148 aaKnown RBP4.6□□□□□ -1.67
CTNND1-236ENST00000533667 C9orf129Q5T035 196 aaKnown RBP4.6□□□□□ -1.67
CTNND1-236ENST00000533667 COL6A3P12111 3177 aa4.59□□□□□ -1.67
CTNND1-236ENST00000533667 MTORP42345 2549 aa4.59□□□□□ -1.67
CTNND1-236ENST00000533667 ANKRD17O75179 2603 aaKnown RBP4.59□□□□□ -1.67
CTNND1-236ENST00000533667 BPTFQ12830 3046 aa4.59□□□□□ -1.68
CTNND1-236ENST00000533667 C9orf163Q8N9P6 203 aa4.58□□□□□ -1.68
CTNND1-236ENST00000533667 CRIPTQ9P021 101 aa4.58□□□□□ -1.68
CTNND1-236ENST00000533667 VCANP13611 3396 aa4.58□□□□□ -1.68
CTNND1-236ENST00000533667 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
CTNND1-236ENST00000533667 DMAC1Q96GE9 116 aa4.57□□□□□ -1.68
CTNND1-236ENST00000533667 IGLV5-37A0A075B6J1 123 aa4.56□□□□□ -1.68
CTNND1-236ENST00000533667 OXTP01178 125 aa4.56□□□□□ -1.68
CTNND1-236ENST00000533667 OBSCN-AS1Q96MR7 158 aa4.56□□□□□ -1.68
CTNND1-236ENST00000533667 CNBPP62633 177 aaKnown RBP4.56□□□□□ -1.68
CTNND1-236ENST00000533667 IGLV8-61A0A075B6I0 122 aa4.56□□□□□ -1.68
CTNND1-236ENST00000533667 K7EIL1 84 aa4.56□□□□□ -1.68
CTNND1-236ENST00000533667 KRTAP10-11P60412 298 aa4.56□□□□□ -1.68
CTNND1-236ENST00000533667 MYO15AQ9UKN7 3530 aa4.55□□□□□ -1.68
CTNND1-236ENST00000533667 F8P00451 2351 aa4.55□□□□□ -1.68
CTNND1-236ENST00000533667 PRR26Q8N8Z3 221 aa4.55□□□□□ -1.68
CTNND1-236ENST00000533667 LINC00304Q8N9R0 145 aa4.55□□□□□ -1.68
CTNND1-236ENST00000533667 IGLV5-48A0A075B6I7 105 aa4.55□□□□□ -1.68
CTNND1-236ENST00000533667 DSCR10P59022 87 aa4.55□□□□□ -1.68
CTNND1-236ENST00000533667 SPTBN4Q9H254 2564 aa4.55□□□□□ -1.68
CTNND1-236ENST00000533667 A0A087WTM6 91 aa4.55□□□□□ -1.68
CTNND1-236ENST00000533667 CHD8Q9HCK8 2581 aa4.54□□□□□ -1.68
CTNND1-236ENST00000533667 C5orf42Q9H799 3197 aa4.54□□□□□ -1.68
CTNND1-236ENST00000533667 A0A1W2PNM2 257 aa4.54□□□□□ -1.68
CTNND1-236ENST00000533667 Q5VV11 94 aa4.54□□□□□ -1.68
CTNND1-236ENST00000533667 LINC01558Q9Y6Z2 57 aa4.54□□□□□ -1.68
CTNND1-236ENST00000533667 SPRR4Q96PI1 79 aa4.53□□□□□ -1.68
CTNND1-236ENST00000533667 Q8N9P0 234 aaPredicted RBP4.53□□□□□ -1.68
CTNND1-236ENST00000533667 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
CTNND1-236ENST00000533667 IGLV7-43P04211 117 aa4.52□□□□□ -1.69
CTNND1-236ENST00000533667 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
CTNND1-236ENST00000533667 KRTAP10-3P60369 221 aa4.52□□□□□ -1.69
CTNND1-236ENST00000533667 FAM229BQ4G0N7 80 aa4.52□□□□□ -1.69
CTNND1-236ENST00000533667 OCR1Q9BZK8 76 aa4.52□□□□□ -1.69
CTNND1-236ENST00000533667 POLQO75417 2590 aa4.51□□□□□ -1.69
CTNND1-236ENST00000533667 ZNF575Q86XF7 245 aa4.51□□□□□ -1.69
CTNND1-236ENST00000533667 CYSTM1Q9H1C7 97 aa4.51□□□□□ -1.69
CTNND1-236ENST00000533667 A0A1W2PNN7 141 aa4.5□□□□□ -1.69
CTNND1-236ENST00000533667 ACANP16112 2415 aa4.5□□□□□ -1.69
CTNND1-236ENST00000533667 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
CTNND1-236ENST00000533667 DNAH14Q0VDD8 3507 aa4.5□□□□□ -1.69
CTNND1-236ENST00000533667 PSORS1C2Q9UIG4 136 aa4.49□□□□□ -1.69
CTNND1-236ENST00000533667 APLNQ9ULZ1 77 aa4.49□□□□□ -1.69
CTNND1-236ENST00000533667 CSAG1Q6PB30 78 aa4.48□□□□□ -1.69
CTNND1-236ENST00000533667 FAM104AQ969W3 186 aa4.48□□□□□ -1.69
CTNND1-236ENST00000533667 TRIOO75962 3097 aa4.48□□□□□ -1.69
CTNND1-236ENST00000533667 J3QL48 77 aa4.47□□□□□ -1.69
CTNND1-236ENST00000533667 A0A0G2JQZ4 141 aa4.47□□□□□ -1.69
CTNND1-236ENST00000533667 KRTAP1-3Q8IUG1 177 aa4.47□□□□□ -1.69
CTNND1-236ENST00000533667 FASNP49327 2511 aaKnown RBP4.46□□□□□ -1.69
CTNND1-236ENST00000533667 CASC10Q5T4H9 136 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms