RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 CHD9Q3L8U1 2897 aa5.02□□□□□ -1.61
CTNND1-233ENST00000532787 FAM168BA1KXE4 195 aa5.01□□□□□ -1.61
CTNND1-233ENST00000532787 C15orf56Q8N910 161 aa5.01□□□□□ -1.61
CTNND1-233ENST00000532787 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
CTNND1-233ENST00000532787 KRTAP24-1Q3LI83 254 aa5□□□□□ -1.61
CTNND1-233ENST00000532787 WWC2-AS2Q96NR7 200 aa5□□□□□ -1.61
CTNND1-233ENST00000532787 LINC00304Q8N9R0 145 aa4.99□□□□□ -1.61
CTNND1-233ENST00000532787 DSCR10P59022 87 aa4.99□□□□□ -1.61
CTNND1-233ENST00000532787 BDP1A6H8Y1 2624 aa4.99□□□□□ -1.61
CTNND1-233ENST00000532787 C19orf73Q9NVV2 129 aa4.98□□□□□ -1.61
CTNND1-233ENST00000532787 TLN2Q9Y4G6 2542 aa4.98□□□□□ -1.61
CTNND1-233ENST00000532787 IGLV5-37A0A075B6J1 123 aa4.98□□□□□ -1.61
CTNND1-233ENST00000532787 OBSCN-AS1Q96MR7 158 aa4.98□□□□□ -1.61
CTNND1-233ENST00000532787 TRANK1O15050 2925 aa4.97□□□□□ -1.61
CTNND1-233ENST00000532787 Q1T7F1 81 aa4.97□□□□□ -1.61
CTNND1-233ENST00000532787 BRCA2P51587 3418 aa4.96□□□□□ -1.61
CTNND1-233ENST00000532787 C9orf163Q8N9P6 203 aa4.96□□□□□ -1.62
CTNND1-233ENST00000532787 FAM104AQ969W3 186 aa4.96□□□□□ -1.62
CTNND1-233ENST00000532787 CNBPP62633 177 aaKnown RBP4.95□□□□□ -1.62
CTNND1-233ENST00000532787 IGLV5-48A0A075B6I7 105 aa4.95□□□□□ -1.62
CTNND1-233ENST00000532787 EIF4EBP3O60516 100 aaPredicted RBP4.95□□□□□ -1.62
CTNND1-233ENST00000532787 FN1P02751 2386 aaKnown RBP4.95□□□□□ -1.62
CTNND1-233ENST00000532787 SPRR4Q96PI1 79 aa4.94□□□□□ -1.62
CTNND1-233ENST00000532787 RANBP2P49792 3224 aaKnown RBP4.93□□□□□ -1.62
CTNND1-233ENST00000532787 IGLV7-43P04211 117 aa4.93□□□□□ -1.62
CTNND1-233ENST00000532787 C5orf42Q9H799 3197 aa4.93□□□□□ -1.62
CTNND1-233ENST00000532787 A0A087WTM6 91 aa4.93□□□□□ -1.62
CTNND1-233ENST00000532787 A0A1W2PNM2 257 aa4.93□□□□□ -1.62
CTNND1-233ENST00000532787 ACANP16112 2415 aa4.93□□□□□ -1.62
CTNND1-233ENST00000532787 CHD8Q9HCK8 2581 aa4.92□□□□□ -1.62
CTNND1-233ENST00000532787 MKI67P46013 3256 aaKnown RBP4.92□□□□□ -1.62
CTNND1-233ENST00000532787 GIG44P09565 113 aaPredicted RBP4.92□□□□□ -1.62
CTNND1-233ENST00000532787 COX6B2Q6YFQ2 88 aa4.91□□□□□ -1.62
CTNND1-233ENST00000532787 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
CTNND1-233ENST00000532787 A0A0D9SG42 100 aa4.9□□□□□ -1.62
CTNND1-233ENST00000532787 J3QL48 77 aa4.9□□□□□ -1.62
CTNND1-233ENST00000532787 OCR1Q9BZK8 76 aa4.9□□□□□ -1.62
CTNND1-233ENST00000532787 PCSK5Q92824 1860 aa4.9□□□□□ -1.62
CTNND1-233ENST00000532787 ZNF575Q86XF7 245 aa4.89□□□□□ -1.63
CTNND1-233ENST00000532787 IGLV7-46A0A075B6I9 117 aa4.89□□□□□ -1.63
CTNND1-233ENST00000532787 K7EIL1 84 aa4.89□□□□□ -1.63
CTNND1-233ENST00000532787 Q75L30 129 aa4.89□□□□□ -1.63
CTNND1-233ENST00000532787 KRTAP10-11P60412 298 aa4.88□□□□□ -1.63
CTNND1-233ENST00000532787 A0A096LNT2 108 aa4.88□□□□□ -1.63
CTNND1-233ENST00000532787 LAMA2P24043 3122 aaKnown RBP4.88□□□□□ -1.63
CTNND1-233ENST00000532787 PSORS1C2Q9UIG4 136 aa4.87□□□□□ -1.63
CTNND1-233ENST00000532787 A0A1W2PNN7 141 aa4.87□□□□□ -1.63
CTNND1-233ENST00000532787 Q5XG85 94 aa4.87□□□□□ -1.63
CTNND1-233ENST00000532787 DMAC1Q96GE9 116 aa4.87□□□□□ -1.63
CTNND1-233ENST00000532787 PKD1L2Q7Z442 2459 aa4.87□□□□□ -1.63
CTNND1-233ENST00000532787 TLN1Q9Y490 2541 aaKnown RBP4.87□□□□□ -1.63
CTNND1-233ENST00000532787 LAMA3Q16787 3333 aa4.86□□□□□ -1.63
CTNND1-233ENST00000532787 C9orf92A6NGG3 77 aa4.86□□□□□ -1.63
CTNND1-233ENST00000532787 PRR26Q8N8Z3 221 aa4.86□□□□□ -1.63
CTNND1-233ENST00000532787 CSAG1Q6PB30 78 aa4.85□□□□□ -1.63
CTNND1-233ENST00000532787 PIEZO2Q9H5I5 2752 aa4.85□□□□□ -1.63
CTNND1-233ENST00000532787 CEP295Q9C0D2 2601 aa4.84□□□□□ -1.63
CTNND1-233ENST00000532787 LINC01558Q9Y6Z2 57 aa4.84□□□□□ -1.63
CTNND1-233ENST00000532787 LINC00483Q53H64 154 aa4.84□□□□□ -1.64
CTNND1-233ENST00000532787 IGF2RP11717 2491 aa4.82□□□□□ -1.64
CTNND1-233ENST00000532787 A0A0G2JQZ4 141 aa4.82□□□□□ -1.64
CTNND1-233ENST00000532787 LRRK2Q5S007 2527 aa4.82□□□□□ -1.64
CTNND1-233ENST00000532787 FAM229BQ4G0N7 80 aa4.82□□□□□ -1.64
CTNND1-233ENST00000532787 A0A1B0GU33 70 aa4.81□□□□□ -1.64
CTNND1-233ENST00000532787 FP248Q71RG6 208 aaPredicted RBP4.81□□□□□ -1.64
CTNND1-233ENST00000532787 JMJD1CQ15652 2540 aa4.81□□□□□ -1.64
CTNND1-233ENST00000532787 KRTAP10-3P60369 221 aa4.81□□□□□ -1.64
CTNND1-233ENST00000532787 Q8N1X5 172 aa4.81□□□□□ -1.64
CTNND1-233ENST00000532787 KRTAP16-1A8MUX0 517 aa4.81□□□□□ -1.64
CTNND1-233ENST00000532787 SETD2Q9BYW2 2564 aaPredicted RBP4.81□□□□□ -1.64
CTNND1-233ENST00000532787 Q8N9P0 234 aaPredicted RBP4.8□□□□□ -1.64
CTNND1-233ENST00000532787 NCOR2Q9Y618 2525 aa4.79□□□□□ -1.64
CTNND1-233ENST00000532787 ZFYVE26Q68DK2 2539 aa4.79□□□□□ -1.64
CTNND1-233ENST00000532787 ANAPC11Q9NYG5 84 aa4.79□□□□□ -1.64
CTNND1-233ENST00000532787 POLQO75417 2590 aa4.79□□□□□ -1.64
CTNND1-233ENST00000532787 PRRC2CQ9Y520 2896 aaKnown RBP4.78□□□□□ -1.64
CTNND1-233ENST00000532787 UNC80Q8N2C7 3258 aa4.78□□□□□ -1.64
CTNND1-233ENST00000532787 HRES1P13985 223 aa4.78□□□□□ -1.64
CTNND1-233ENST00000532787 ABCA12Q86UK0 2595 aa4.78□□□□□ -1.64
CTNND1-233ENST00000532787 CASC10Q5T4H9 136 aa4.78□□□□□ -1.64
CTNND1-233ENST00000532787 ANKRD11Q6UB99 2663 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-233ENST00000532787 SPINK7P58062 85 aa4.76□□□□□ -1.65
CTNND1-233ENST00000532787 MMP24-AS1A0A0U1RRL7 71 aa4.76□□□□□ -1.65
CTNND1-233ENST00000532787 Q5VV11 94 aa4.76□□□□□ -1.65
CTNND1-233ENST00000532787 CDH23Q9H251 3354 aa4.76□□□□□ -1.65
CTNND1-233ENST00000532787 SPRR1AP35321 89 aa4.75□□□□□ -1.65
CTNND1-233ENST00000532787 USP9XQ93008 2570 aaPredicted RBP4.75□□□□□ -1.65
CTNND1-233ENST00000532787 SPRR1BP22528 89 aa4.75□□□□□ -1.65
CTNND1-233ENST00000532787 Q6ZSA8 131 aa4.75□□□□□ -1.65
CTNND1-233ENST00000532787 ZCCHC13Q8WW36 166 aaKnown RBP4.75□□□□□ -1.65
CTNND1-233ENST00000532787 A0A0C4DFX4 3053 aa4.74□□□□□ -1.65
CTNND1-233ENST00000532787 FLG2Q5D862 2391 aaPredicted RBP4.74□□□□□ -1.65
CTNND1-233ENST00000532787 TRIOO75962 3097 aa4.74□□□□□ -1.65
CTNND1-233ENST00000532787 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
CTNND1-233ENST00000532787 FASNP49327 2511 aaKnown RBP4.73□□□□□ -1.65
CTNND1-233ENST00000532787 SMR3BP02814 79 aaPredicted RBP4.72□□□□□ -1.65
CTNND1-233ENST00000532787 ASB16-AS1Q495Z4 193 aa4.72□□□□□ -1.65
CTNND1-233ENST00000532787 PLAC8Q9NZF1 115 aa4.72□□□□□ -1.65
CTNND1-233ENST00000532787 KRTAP1-3Q8IUG1 177 aa4.71□□□□□ -1.65
CTNND1-233ENST00000532787 PRUNE2Q8WUY3 3088 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms