RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 ZNF861PO60384 105 aa5.36□□□□□ -1.55
CTNND1-231ENST00000532463 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
CTNND1-231ENST00000532463 CEP192Q8TEP8 1941 aa5.35□□□□□ -1.55
CTNND1-231ENST00000532463 COL4A4P53420 1690 aaPredicted RBP5.35□□□□□ -1.55
CTNND1-231ENST00000532463 SMR3AQ99954 134 aa5.35□□□□□ -1.55
CTNND1-231ENST00000532463 LTBP2Q14767 1821 aa5.35□□□□□ -1.55
CTNND1-231ENST00000532463 IGLV7-46A0A075B6I9 117 aa5.34□□□□□ -1.55
CTNND1-231ENST00000532463 LRP4O75096 1905 aa5.34□□□□□ -1.56
CTNND1-231ENST00000532463 COL5A1P20908 1838 aaPredicted RBP5.33□□□□□ -1.56
CTNND1-231ENST00000532463 IGLV7-43P04211 117 aa5.32□□□□□ -1.56
CTNND1-231ENST00000532463 HRES1P13985 223 aa5.32□□□□□ -1.56
CTNND1-231ENST00000532463 IGF2RP11717 2491 aa5.32□□□□□ -1.56
CTNND1-231ENST00000532463 DNAH10OSP0CZ25 163 aa5.32□□□□□ -1.56
CTNND1-231ENST00000532463 TET2Q6N021 2002 aaPredicted RBP5.31□□□□□ -1.56
CTNND1-231ENST00000532463 PTPRSQ13332 1948 aa5.31□□□□□ -1.56
CTNND1-231ENST00000532463 RAI1Q7Z5J4 1906 aaPredicted RBP5.31□□□□□ -1.56
CTNND1-231ENST00000532463 A0A1W2PPR1 153 aa5.3□□□□□ -1.56
CTNND1-231ENST00000532463 OCR1Q9BZK8 76 aa5.3□□□□□ -1.56
CTNND1-231ENST00000532463 Q8N9P0 234 aaPredicted RBP5.3□□□□□ -1.56
CTNND1-231ENST00000532463 A0A1W2PNM2 257 aa5.28□□□□□ -1.56
CTNND1-231ENST00000532463 SETD2Q9BYW2 2564 aaPredicted RBP5.28□□□□□ -1.56
CTNND1-231ENST00000532463 TLN2Q9Y4G6 2542 aa5.28□□□□□ -1.56
CTNND1-231ENST00000532463 A0A0G2JQZ4 141 aa5.28□□□□□ -1.56
CTNND1-231ENST00000532463 A0A1W2PNN7 141 aa5.28□□□□□ -1.56
CTNND1-231ENST00000532463 ACANP16112 2415 aa5.28□□□□□ -1.56
CTNND1-231ENST00000532463 KRTAP10-9P60411 292 aa5.28□□□□□ -1.56
CTNND1-231ENST00000532463 Q6ZSA8 131 aa5.28□□□□□ -1.56
CTNND1-231ENST00000532463 CPAMD8Q8IZJ3 1885 aa5.28□□□□□ -1.56
CTNND1-231ENST00000532463 H1FX-AS1Q4G0G2 97 aa5.28□□□□□ -1.56
CTNND1-231ENST00000532463 ROMO1P60602 79 aa5.27□□□□□ -1.57
CTNND1-231ENST00000532463 MUC22E2RYF6 1773 aaPredicted RBP5.27□□□□□ -1.57
CTNND1-231ENST00000532463 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.27□□□□□ -1.57
CTNND1-231ENST00000532463 Q5XG85 94 aa5.26□□□□□ -1.57
CTNND1-231ENST00000532463 SPRR4Q96PI1 79 aa5.26□□□□□ -1.57
CTNND1-231ENST00000532463 Q8NAQ8 132 aa5.26□□□□□ -1.57
CTNND1-231ENST00000532463 ADAMTS20P59510 1910 aa5.25□□□□□ -1.57
CTNND1-231ENST00000532463 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
CTNND1-231ENST00000532463 JMJD1CQ15652 2540 aa5.25□□□□□ -1.57
CTNND1-231ENST00000532463 PSORS1C2Q9UIG4 136 aa5.25□□□□□ -1.57
CTNND1-231ENST00000532463 PTPRBP23467 1997 aa5.24□□□□□ -1.57
CTNND1-231ENST00000532463 Q5VV11 94 aa5.24□□□□□ -1.57
CTNND1-231ENST00000532463 TNP2Q05952 138 aa5.24□□□□□ -1.57
CTNND1-231ENST00000532463 CENPFP49454 3210 aa5.23□□□□□ -1.57
CTNND1-231ENST00000532463 ASB16-AS1Q495Z4 193 aa5.23□□□□□ -1.57
CTNND1-231ENST00000532463 ABCA12Q86UK0 2595 aa5.23□□□□□ -1.57
CTNND1-231ENST00000532463 TLN1Q9Y490 2541 aaKnown RBP5.23□□□□□ -1.57
CTNND1-231ENST00000532463 EIF4EBP3O60516 100 aaPredicted RBP5.23□□□□□ -1.57
CTNND1-231ENST00000532463 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
CTNND1-231ENST00000532463 C19orf73Q9NVV2 129 aa5.23□□□□□ -1.57
CTNND1-231ENST00000532463 CHD8Q9HCK8 2581 aa5.22□□□□□ -1.57
CTNND1-231ENST00000532463 ANAPC11Q9NYG5 84 aa5.22□□□□□ -1.57
CTNND1-231ENST00000532463 M0R2T5 61 aa5.22□□□□□ -1.57
CTNND1-231ENST00000532463 R4GN34 69 aa5.22□□□□□ -1.57
CTNND1-231ENST00000532463 WWC2-AS2Q96NR7 200 aa5.22□□□□□ -1.57
CTNND1-231ENST00000532463 PKD1L2Q7Z442 2459 aa5.22□□□□□ -1.57
CTNND1-231ENST00000532463 USP9XQ93008 2570 aaPredicted RBP5.21□□□□□ -1.57
CTNND1-231ENST00000532463 C10orf142B7Z368 130 aa5.21□□□□□ -1.58
CTNND1-231ENST00000532463 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
CTNND1-231ENST00000532463 PRR34Q9NV39 138 aa5.21□□□□□ -1.58
CTNND1-231ENST00000532463 S4R3F8 94 aa5.2□□□□□ -1.58
CTNND1-231ENST00000532463 FAM229BQ4G0N7 80 aa5.2□□□□□ -1.58
CTNND1-231ENST00000532463 A0A087WTM6 91 aa5.17□□□□□ -1.58
CTNND1-231ENST00000532463 ZFYVE26Q68DK2 2539 aa5.17□□□□□ -1.58
CTNND1-231ENST00000532463 SPTBN4Q9H254 2564 aa5.17□□□□□ -1.58
CTNND1-231ENST00000532463 SMR3BP02814 79 aaPredicted RBP5.15□□□□□ -1.58
CTNND1-231ENST00000532463 ZCCHC13Q8WW36 166 aaKnown RBP5.15□□□□□ -1.58
CTNND1-231ENST00000532463 CEP295Q9C0D2 2601 aa5.15□□□□□ -1.58
CTNND1-231ENST00000532463 USP9YO00507 2555 aaPredicted RBP5.14□□□□□ -1.59
CTNND1-231ENST00000532463 CNBPP62633 177 aaKnown RBP5.13□□□□□ -1.59
CTNND1-231ENST00000532463 LRRK2Q5S007 2527 aa5.13□□□□□ -1.59
CTNND1-231ENST00000532463 FLG2Q5D862 2391 aaPredicted RBP5.13□□□□□ -1.59
CTNND1-231ENST00000532463 LINC00612Q8N6U2 182 aa5.12□□□□□ -1.59
CTNND1-231ENST00000532463 PCNTO95613 3336 aa5.12□□□□□ -1.59
CTNND1-231ENST00000532463 MMP24-AS1A0A0U1RRL7 71 aa5.11□□□□□ -1.59
CTNND1-231ENST00000532463 ANKRD11Q6UB99 2663 aaPredicted RBP5.11□□□□□ -1.59
CTNND1-231ENST00000532463 FASNP49327 2511 aaKnown RBP5.11□□□□□ -1.59
CTNND1-231ENST00000532463 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
CTNND1-231ENST00000532463 M0QZ58 72 aa5.08□□□□□ -1.6
CTNND1-231ENST00000532463 Q5W150 140 aa5.08□□□□□ -1.6
CTNND1-231ENST00000532463 C20orf166-AS1Q96NR2 134 aa5.08□□□□□ -1.6
CTNND1-231ENST00000532463 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
CTNND1-231ENST00000532463 GIG44P09565 113 aaPredicted RBP5.07□□□□□ -1.6
CTNND1-231ENST00000532463 COL27A1Q8IZC6 1860 aaPredicted RBP5.07□□□□□ -1.6
CTNND1-231ENST00000532463 MTORP42345 2549 aa5.07□□□□□ -1.6
CTNND1-231ENST00000532463 KRTAP24-1Q3LI83 254 aa5.06□□□□□ -1.6
CTNND1-231ENST00000532463 KLK9Q2XQG4 91 aa5.06□□□□□ -1.6
CTNND1-231ENST00000532463 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
CTNND1-231ENST00000532463 CEP350Q5VT06 3117 aa5.03□□□□□ -1.6
CTNND1-231ENST00000532463 POLQO75417 2590 aa5.03□□□□□ -1.6
CTNND1-231ENST00000532463 CYSTM1Q9H1C7 97 aa5.03□□□□□ -1.6
CTNND1-231ENST00000532463 EPG5Q9HCE0 2579 aa5.03□□□□□ -1.6
CTNND1-231ENST00000532463 CR1P17927 2039 aa5□□□□□ -1.61
CTNND1-231ENST00000532463 Q8NDZ9 215 aa5□□□□□ -1.61
CTNND1-231ENST00000532463 CASC10Q5T4H9 136 aa5□□□□□ -1.61
CTNND1-231ENST00000532463 SPATA8Q6RVD6 105 aa4.99□□□□□ -1.61
CTNND1-231ENST00000532463 K7EIL1 84 aa4.98□□□□□ -1.61
CTNND1-231ENST00000532463 PRRC2CQ9Y520 2896 aaKnown RBP4.97□□□□□ -1.61
CTNND1-231ENST00000532463 OXTP01178 125 aa4.97□□□□□ -1.61
CTNND1-231ENST00000532463 LINC00472Q9H8W2 130 aa4.96□□□□□ -1.62
CTNND1-231ENST00000532463 FLNBO75369 2602 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms