RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 C5orf52A6NGY3 159 aa7.54□□□□□ -1.2
SF3B2-212ENST00000531589 S100A7L2Q5SY68 101 aa7.54□□□□□ -1.2
SF3B2-212ENST00000531589 PPDPFQ9H3Y8 114 aa7.54□□□□□ -1.2
SF3B2-212ENST00000531589 SPANXB1Q9NS25 103 aaPredicted RBP7.54□□□□□ -1.2
SF3B2-212ENST00000531589 B5MCH6 92 aa7.53□□□□□ -1.2
SF3B2-212ENST00000531589 NDUFC2O95298 119 aa7.53□□□□□ -1.2
SF3B2-212ENST00000531589 FP248Q71RG6 208 aaPredicted RBP7.53□□□□□ -1.2
SF3B2-212ENST00000531589 C20orf202A1L168 122 aa7.52□□□□□ -1.21
SF3B2-212ENST00000531589 E9PLD3 99 aa7.52□□□□□ -1.21
SF3B2-212ENST00000531589 SPINK1P00995 79 aa7.52□□□□□ -1.21
SF3B2-212ENST00000531589 LINC00483Q53H64 154 aa7.52□□□□□ -1.21
SF3B2-212ENST00000531589 ANKRD39Q53RE8 183 aa7.52□□□□□ -1.21
SF3B2-212ENST00000531589 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.21
SF3B2-212ENST00000531589 Q8NBF4 154 aa7.52□□□□□ -1.21
SF3B2-212ENST00000531589 JOSD1Q15040 202 aaPredicted RBP7.51□□□□□ -1.21
SF3B2-212ENST00000531589 CBY1Q9Y3M2 126 aa7.51□□□□□ -1.21
SF3B2-212ENST00000531589 Q6ZRX8 168 aa7.5□□□□□ -1.21
SF3B2-212ENST00000531589 SSBP3-AS1Q7Z2R9 100 aa7.5□□□□□ -1.21
SF3B2-212ENST00000531589 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
SF3B2-212ENST00000531589 NPC2P61916 151 aa7.49□□□□□ -1.21
SF3B2-212ENST00000531589 TRAV23DV6A0A075B6W5 121 aa7.48□□□□□ -1.21
SF3B2-212ENST00000531589 A0A0J9YXY3 114 aa7.48□□□□□ -1.21
SF3B2-212ENST00000531589 SCGB1D1O95968 90 aa7.48□□□□□ -1.21
SF3B2-212ENST00000531589 HINT1P49773 126 aaPredicted RBP7.48□□□□□ -1.21
SF3B2-212ENST00000531589 IGLV9-49A0A0B4J1Y8 123 aa7.47□□□□□ -1.21
SF3B2-212ENST00000531589 ZNF815PA8K554 130 aa7.47□□□□□ -1.21
SF3B2-212ENST00000531589 ERC2-IT1O76042 136 aa7.47□□□□□ -1.21
SF3B2-212ENST00000531589 RPS29P62273 56 aaKnown RBP7.47□□□□□ -1.21
SF3B2-212ENST00000531589 ADAMTSL4-AS1Q5T5F5 129 aa7.47□□□□□ -1.21
SF3B2-212ENST00000531589 Q9BRP9 147 aa7.47□□□□□ -1.21
SF3B2-212ENST00000531589 ZNF73O43830 326 aaPredicted RBP7.46□□□□□ -1.22
SF3B2-212ENST00000531589 EIF4EBP3O60516 100 aaPredicted RBP7.46□□□□□ -1.22
SF3B2-212ENST00000531589 MOBPQ13875 183 aa7.46□□□□□ -1.22
SF3B2-212ENST00000531589 PCP2Q8IVA1 136 aa7.46□□□□□ -1.22
SF3B2-212ENST00000531589 SOSTDC1Q6X4U4 206 aa7.44□□□□□ -1.22
SF3B2-212ENST00000531589 SPANXCQ9NY87 97 aa7.44□□□□□ -1.22
SF3B2-212ENST00000531589 LITAFQ99732 161 aa7.43□□□□□ -1.22
SF3B2-212ENST00000531589 SLC25A20O43772 301 aa7.42□□□□□ -1.22
SF3B2-212ENST00000531589 TIMM17BO60830 172 aa7.42□□□□□ -1.22
SF3B2-212ENST00000531589 KRTAP13-3Q3SY46 172 aa7.42□□□□□ -1.22
SF3B2-212ENST00000531589 OR13C6PQ8NH95 151 aa7.42□□□□□ -1.22
SF3B2-212ENST00000531589 C9orf153Q5TBE3 101 aa7.41□□□□□ -1.22
SF3B2-212ENST00000531589 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
SF3B2-212ENST00000531589 HSBP1L1C9JCN9 74 aa7.4□□□□□ -1.22
SF3B2-212ENST00000531589 SLC25A34Q6PIV7 304 aa7.4□□□□□ -1.22
SF3B2-212ENST00000531589 SCGB1D4Q6XE38 83 aa7.4□□□□□ -1.22
SF3B2-212ENST00000531589 LINC00518Q8N0U6 118 aa7.4□□□□□ -1.22
SF3B2-212ENST00000531589 Q8N377 158 aa7.4□□□□□ -1.22
SF3B2-212ENST00000531589 SPANXDQ9BXN6 97 aa7.4□□□□□ -1.22
SF3B2-212ENST00000531589 DHRS4-AS1Q9P1J3 65 aa7.39□□□□□ -1.23
SF3B2-212ENST00000531589 MUC17Q685J3 4493 aa7.39□□□□□ -1.23
SF3B2-212ENST00000531589 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
SF3B2-212ENST00000531589 AKR1D1P51857 326 aa7.37□□□□□ -1.23
SF3B2-212ENST00000531589 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
SF3B2-212ENST00000531589 ASB16-AS1Q495Z4 193 aa7.37□□□□□ -1.23
SF3B2-212ENST00000531589 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
SF3B2-212ENST00000531589 ST20-AS1Q8NBB2 130 aa7.37□□□□□ -1.23
SF3B2-212ENST00000531589 COPS9Q8WXC6 57 aa7.37□□□□□ -1.23
SF3B2-212ENST00000531589 SPRR1BP22528 89 aa7.36□□□□□ -1.23
SF3B2-212ENST00000531589 PYY3Q5JQD4 70 aa7.36□□□□□ -1.23
SF3B2-212ENST00000531589 SPATA45Q537H7 98 aa7.35□□□□□ -1.23
SF3B2-212ENST00000531589 C14orf144Q96I85 54 aa7.35□□□□□ -1.23
SF3B2-212ENST00000531589 LAMTOR3Q9UHA4 124 aa7.35□□□□□ -1.23
SF3B2-212ENST00000531589 COX7BP24311 80 aa7.34□□□□□ -1.23
SF3B2-212ENST00000531589 LIMD2Q9BT23 127 aa7.34□□□□□ -1.23
SF3B2-212ENST00000531589 VAMP8Q9BV40 100 aa7.34□□□□□ -1.23
SF3B2-212ENST00000531589 ELOF1P60002 83 aaKnown RBP7.33□□□□□ -1.24
SF3B2-212ENST00000531589 MUSTN1Q8IVN3 82 aa7.33□□□□□ -1.24
SF3B2-212ENST00000531589 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
SF3B2-212ENST00000531589 TAL2Q16559 108 aa7.32□□□□□ -1.24
SF3B2-212ENST00000531589 C6orf99Q4VX62 202 aa7.32□□□□□ -1.24
SF3B2-212ENST00000531589 TRBV7-6A0A0J9YX20 115 aa7.31□□□□□ -1.24
SF3B2-212ENST00000531589 COX8AP10176 69 aa7.31□□□□□ -1.24
SF3B2-212ENST00000531589 IFITM1P13164 125 aa7.31□□□□□ -1.24
SF3B2-212ENST00000531589 Q6ZVH6 145 aa7.31□□□□□ -1.24
SF3B2-212ENST00000531589 TEX49A0A1B0GTD5 131 aa7.29□□□□□ -1.24
SF3B2-212ENST00000531589 A0A1B0GWB2 263 aa7.29□□□□□ -1.24
SF3B2-212ENST00000531589 A6NDN8 102 aa7.29□□□□□ -1.24
SF3B2-212ENST00000531589 XP32Q5T750 250 aa7.29□□□□□ -1.24
SF3B2-212ENST00000531589 CD164Q04900 197 aa7.28□□□□□ -1.24
SF3B2-212ENST00000531589 DEFB105AQ8NG35 78 aa7.28□□□□□ -1.24
SF3B2-212ENST00000531589 KRTAP9-2Q9BYQ4 174 aa7.28□□□□□ -1.24
SF3B2-212ENST00000531589 PRO1933Q9H354 126 aa7.28□□□□□ -1.24
SF3B2-212ENST00000531589 A4D1N5 150 aa7.27□□□□□ -1.25
SF3B2-212ENST00000531589 LINC01547P58512 204 aaPredicted RBP7.27□□□□□ -1.25
SF3B2-212ENST00000531589 HRCT1Q6UXD1 115 aa7.27□□□□□ -1.25
SF3B2-212ENST00000531589 C2orf91Q6ZV80 131 aa7.27□□□□□ -1.25
SF3B2-212ENST00000531589 C12orf57Q99622 126 aa7.27□□□□□ -1.25
SF3B2-212ENST00000531589 Q1RN00 199 aa7.26□□□□□ -1.25
SF3B2-212ENST00000531589 HIST1H4GQ99525 98 aa7.25□□□□□ -1.25
SF3B2-212ENST00000531589 NHP2Q9NX24 153 aaKnown RBP7.25□□□□□ -1.25
SF3B2-212ENST00000531589 TRAV13-2A0A0B4J235 113 aa7.24□□□□□ -1.25
SF3B2-212ENST00000531589 H7C2G1 150 aa7.24□□□□□ -1.25
SF3B2-212ENST00000531589 DLEU1O43261 78 aa7.24□□□□□ -1.25
SF3B2-212ENST00000531589 IGLV5-48A0A075B6I7 105 aa7.22□□□□□ -1.25
SF3B2-212ENST00000531589 VAMP3Q15836 100 aa7.21□□□□□ -1.26
SF3B2-212ENST00000531589 Q5XG85 94 aa7.21□□□□□ -1.26
SF3B2-212ENST00000531589 KRTAP4-1Q9BYQ7 146 aa7.21□□□□□ -1.26
SF3B2-212ENST00000531589 SMIM29Q86T20 159 aa7.2□□□□□ -1.26
SF3B2-212ENST00000531589 LOC105371267A0A1B0GV96 52 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms